Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_001277144 18 1135 NP_001277143 18 1135 NP_001319 18 1135 NP_001012632 18 1135 NP_001077383 18 1135 NP_001320 18 1135 NP_073713 18 1135 XP_005269629 18 1135 XP_005269628 18 1135 XP_005269627 18 1135 XP_005269626 18 1135 XP_006717706 18 1135 XP_005269625 18 1135 XP_005269624 18 1135 XP_006717705 18 1135 XP_005269622 18 1135 XP_005269621 18 1135 XP_006717704 18 1135 XP_005269619 18 1135 XP_005269618 18 1135 XP_005272320 18 1135 XP_005272319 18 1135 XP_005272318 18 1135 NP_005551 17 2528 XP_006723861 17 2528 XP_006723860 17 2528 XP_006723859 17 2528 NP_004371 17 3301 NP_001073315 17 3301 XP_005255182 17 3301 XP_006720911 17 3301 XP_005255181 17 3301 NP_079023 17 4312 NP_065816 16 7355 NP_079034 16 7355 XP_006710573 16 7355 XP_006710572 16 7355 XP_006710571 16 7355 XP_006710570 16 7355 XP_006710569 16 7355 XP_006710568 16 7355 XP_006710567 16 7355 XP_006710566 16 7355 XP_005245859 16 7355 NP_060030 16 7355 NP_060796 15 9605 NP_848927 15 9605 NP_851853 15 9605 NP_001123620 15 9605 NP_001123619 15 9605 NP_695006 15 9605 NP_056189 15 9605 NP_001186509 15 9605 NP_002855 15 9605 NP_001186508 15 9605 XP_005261558 15 9605 XP_005261557 15 9605 XP_005251157 15 9605 XP_005251156 15 9605 XP_005251155 15 9605 XP_005250075 15 9605 XP_005250074 15 9605 XP_005245556 15 9605 XP_005270805 15 9605 NP_115734 15 9605 NP_001123618 15 9605 NP_001025041 15 9605>NP_001277144 Length = 445 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 GAARIREET 9 GAARIR ET Sbjct: 174 GAARIRGET 182>NP_001277143 Length = 445 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 GAARIREET 9 GAARIR ET Sbjct: 174 GAARIRGET 182>NP_001319 Length = 440 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 GAARIREET 9 GAARIR ET Sbjct: 168 GAARIRGET 176>NP_001012632 Length = 429 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 GAARIREET 9 GAARIR ET Sbjct: 157 GAARIRGET 165>NP_001077383 Length = 445 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 GAARIREET 9 GAARIR ET Sbjct: 174 GAARIRGET 182>NP_001320 Length = 445 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 GAARIREET 9 GAARIR ET Sbjct: 174 GAARIRGET 182>NP_073713 Length = 985 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 GAARIREET 9 GAARIR ET Sbjct: 714 GAARIRGET 722>XP_005269629 Length = 445 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 GAARIREET 9 GAARIR ET Sbjct: 174 GAARIRGET 182>XP_005269628 Length = 445 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 GAARIREET 9 GAARIR ET Sbjct: 174 GAARIRGET 182>XP_005269627 Length = 445 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 GAARIREET 9 GAARIR ET Sbjct: 174 GAARIRGET 182>XP_005269626 Length = 445 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 GAARIREET 9 GAARIR ET Sbjct: 174 GAARIRGET 182>XP_006717706 Length = 445 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 GAARIREET 9 GAARIR ET Sbjct: 174 GAARIRGET 182>XP_005269625 Length = 445 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 GAARIREET 9 GAARIR ET Sbjct: 174 GAARIRGET 182>XP_005269624 Length = 445 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 GAARIREET 9 GAARIR ET Sbjct: 174 GAARIRGET 182>XP_006717705 Length = 445 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 GAARIREET 9 GAARIR ET Sbjct: 174 GAARIRGET 182>XP_005269622 Length = 445 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 GAARIREET 9 GAARIR ET Sbjct: 174 GAARIRGET 182>XP_005269621 Length = 445 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 GAARIREET 9 GAARIR ET Sbjct: 174 GAARIRGET 182>XP_006717704 Length = 445 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 GAARIREET 9 GAARIR ET Sbjct: 174 GAARIRGET 182>XP_005269619 Length = 445 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 GAARIREET 9 GAARIR ET Sbjct: 174 GAARIRGET 182>XP_005269618 Length = 445 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 GAARIREET 9 GAARIR ET Sbjct: 174 GAARIRGET 182>XP_005272320 Length = 430 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 GAARIREET 9 GAARIR ET Sbjct: 157 GAARIRGET 165>XP_005272319 Length = 430 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 GAARIREET 9 GAARIR ET Sbjct: 157 GAARIRGET 165>XP_005272318 Length = 441 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 GAARIREET 9 GAARIR ET Sbjct: 168 GAARIRGET 176>NP_005551 Length = 3695 Score = 17.3 bits (33), Expect = 2528 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 GAARIREE 8 GAAR REE Sbjct: 31 GAARAREE 38>XP_006723861 Length = 2300 Score = 17.3 bits (33), Expect = 2528 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 GAARIREE 8 GAAR REE Sbjct: 31 GAARAREE 38>XP_006723860 Length = 2586 Score = 17.3 bits (33), Expect = 2528 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 GAARIREE 8 GAAR REE Sbjct: 31 GAARAREE 38>XP_006723859 Length = 3700 Score = 17.3 bits (33), Expect = 2528 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 GAARIREE 8 GAAR REE Sbjct: 31 GAARAREE 38>NP_004371 Length = 2442 Score = 16.9 bits (32), Expect = 3301 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 GAARIREET 9 GA++++EET Sbjct: 1028 GASQVKEET 1036>NP_001073315 Length = 2404 Score = 16.9 bits (32), Expect = 3301 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 GAARIREET 9 GA++++EET Sbjct: 990 GASQVKEET 998>XP_005255182 Length = 2303 Score = 16.9 bits (32), Expect = 3301 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 GAARIREET 9 GA++++EET Sbjct: 889 GASQVKEET 897>XP_006720911 Length = 2355 Score = 16.9 bits (32), Expect = 3301 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 GAARIREET 9 GA++++EET Sbjct: 1028 GASQVKEET 1036>XP_005255181 Length = 2427 Score = 16.9 bits (32), Expect = 3301 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 GAARIREET 9 GA++++EET Sbjct: 1013 GASQVKEET 1021>NP_079023 Length = 775 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 GAARIRE 7 GAAR+RE Sbjct: 18 GAARLRE 24>NP_065816 Length = 5183 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 GAARIREE 8 GAA +REE Sbjct: 3917 GAAAMREE 3924>NP_079034 Length = 352 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 GAARIREET 9 G RIREE+ Sbjct: 93 GPRRIREES 101>XP_006710573 Length = 5177 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 GAARIREE 8 GAA +REE Sbjct: 3911 GAAAMREE 3918>XP_006710572 Length = 5188 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 GAARIREE 8 GAA +REE Sbjct: 3922 GAAAMREE 3929>XP_006710571 Length = 5194 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 GAARIREE 8 GAA +REE Sbjct: 3928 GAAAMREE 3935>XP_006710570 Length = 5195 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 GAARIREE 8 GAA +REE Sbjct: 3929 GAAAMREE 3936>XP_006710569 Length = 5212 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 GAARIREE 8 GAA +REE Sbjct: 3946 GAAAMREE 3953>XP_006710568 Length = 5221 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 GAARIREE 8 GAA +REE Sbjct: 3955 GAAAMREE 3962>XP_006710567 Length = 5222 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 GAARIREE 8 GAA +REE Sbjct: 3956 GAAAMREE 3963>XP_006710566 Length = 5222 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 GAARIREE 8 GAA +REE Sbjct: 3956 GAAAMREE 3963>XP_005245859 Length = 5223 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 GAARIREE 8 GAA +REE Sbjct: 3957 GAAAMREE 3964>NP_060030 Length = 659 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 GAARIREET 9 GA+ I EET Sbjct: 74 GASEIAEET 82>NP_060796 Length = 329 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 ARIREE 8 ARIREE Sbjct: 253 ARIREE 258>NP_848927 Length = 582 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 GAARIRE 7 G+AR+RE Sbjct: 17 GSARLRE 23>NP_851853 Length = 503 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 GAARIREE 8 G AR+R+E Sbjct: 40 GEARLRDE 47>NP_001123620 Length = 456 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 ARIREE 8 ARIREE Sbjct: 343 ARIREE 348>NP_001123619 Length = 456 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 ARIREE 8 ARIREE Sbjct: 343 ARIREE 348>NP_695006 Length = 473 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 AARIREET 9 AARI EE+ Sbjct: 456 AARIEEES 463>NP_056189 Length = 717 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 AARIREE 8 AARI+EE Sbjct: 352 AARIQEE 358>NP_001186509 Length = 717 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 AARIREE 8 AARI+EE Sbjct: 352 AARIQEE 358>NP_002855 Length = 1482 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 ARIREE 8 ARIREE Sbjct: 320 ARIREE 325>NP_001186508 Length = 738 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 AARIREE 8 AARI+EE Sbjct: 373 AARIQEE 379>XP_005261558 Length = 717 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 AARIREE 8 AARI+EE Sbjct: 352 AARIQEE 358>XP_005261557 Length = 752 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 AARIREE 8 AARI+EE Sbjct: 387 AARIQEE 393>XP_005251157 Length = 381 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 GAARIRE 7 G+AR+RE Sbjct: 17 GSARLRE 23>XP_005251156 Length = 549 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 GAARIRE 7 G+AR+RE Sbjct: 17 GSARLRE 23>XP_005251155 Length = 560 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 GAARIRE 7 G+AR+RE Sbjct: 17 GSARLRE 23>XP_005250075 Length = 190 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 ARIREE 8 ARIREE Sbjct: 114 ARIREE 119>XP_005250074 Length = 343 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 ARIREE 8 ARIREE Sbjct: 267 ARIREE 272>XP_005245556 Length = 933 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 GAARIREET 9 G R+REE+ Sbjct: 560 GIIRVREES 568>XP_005270805 Length = 473 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 AARIREET 9 AARI EE+ Sbjct: 456 AARIEEES 463>NP_115734 Length = 488 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 ARIREE 8 ARIREE Sbjct: 375 ARIREE 380>NP_001123618 Length = 456 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 ARIREE 8 ARIREE Sbjct: 343 ARIREE 348>NP_001025041 Length = 793 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 GAARIREE 8 GA+R REE Sbjct: 236 GASREREE 243Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.310 0.126 0.317 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 443,756 Number of extensions: 664 Number of successful extensions: 67 Number of sequences better than 10000.0: 67 Number of HSP's gapped: 67 Number of HSP's successfully gapped: 67 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.5 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |