Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_001273718 17 2528 NP_001748 17 2528 NP_057116 17 3301 NP_001008223 17 3301 NP_001243846 17 4312 NP_775871 17 4312 NP_001182054 17 4312 NP_056161 16 5631 NP_001726 16 5631 NP_036565 16 5631 NP_056227 16 5631 NP_115823 16 5631 NP_001233 16 5631 XP_006722988 16 5631 XP_005247330 16 5631 XP_005246485 16 5631 NP_037450 16 7355 NP_001274187 16 7355 NP_001277247 16 7355 NP_065708 16 7355 NP_001277248 16 7355 NP_001274189 16 7355 NP_001274188 16 7355 NP_001011720 16 7355 NP_001136205 16 7355 XP_006726491 16 7355 XP_006716510 16 7355 XP_006715877 16 7355 XP_006713045 16 7355 XP_005264942 16 7355 XP_005264941 16 7355 XP_006710244 16 7355 NP_620482 15 9605 NP_001077084 15 9605 NP_783322 15 9605 NP_001265331 15 9605 NP_001019818 15 9605 NP_783324 15 9605 NP_071901 15 9605 NP_783323 15 9605 NP_689986 15 9605 NP_001013860 15 9605 NP_057438 15 9605 XP_005260260 15 9605 XP_006721205 15 9605 XP_005255864 15 9605 XP_006721204 15 9605 XP_006721203 15 9605 XP_006721202 15 9605 XP_006721201 15 9605 XP_006719291 15 9605 XP_006719290 15 9605 XP_006719289 15 9605 XP_006712362 15 9605 NP_003183 15 9605>NP_001273718 Length = 173 Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 GAAIVKDCC 9 G AIV+D C Sbjct: 18 GLAIVRDLC 26>NP_001748 Length = 277 Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 GAAIVKDCC 9 G AIV+D C Sbjct: 18 GLAIVRDLC 26>NP_057116 Length = 364 Score = 16.9 bits (32), Expect = 3301 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 IVKDCC 9 IVK+CC Sbjct: 279 IVKNCC 284>NP_001008223 Length = 364 Score = 16.9 bits (32), Expect = 3301 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 IVKDCC 9 IVK+CC Sbjct: 279 IVKNCC 284>NP_001243846 Length = 143 Score = 16.5 bits (31), Expect = 4312 Identities = 4/9 (44%), Positives = 7/9 (77%) Query: 1 GAAIVKDCC 9 G+A++ CC Sbjct: 109 GSAVMSACC 117>NP_775871 Length = 8384 Score = 16.5 bits (31), Expect = 4312 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 AAIVKDC 8 AA+V+DC Sbjct: 8260 AAVVQDC 8266>NP_001182054 Length = 158 Score = 16.5 bits (31), Expect = 4312 Identities = 4/9 (44%), Positives = 7/9 (77%) Query: 1 GAAIVKDCC 9 G+A++ CC Sbjct: 124 GSAVMSACC 132>NP_056161 Length = 2539 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 GAAIVKDCC 9 G A+V+D C Sbjct: 2512 GDAVVQDIC 2520>NP_001726 Length = 1676 Score = 16.2 bits (30), Expect = 5631 Identities = 4/7 (57%), Positives = 6/7 (85%) Query: 3 AIVKDCC 9 ++VK CC Sbjct: 693 SVVKKCC 699>NP_036565 Length = 1304 Score = 16.2 bits (30), Expect = 5631 Identities = 4/6 (66%), Positives = 5/6 (83%) Query: 4 IVKDCC 9 +VK CC Sbjct: 791 VVKQCC 796>NP_056227 Length = 567 Score = 16.2 bits (30), Expect = 5631 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 2 AAIVKDC 8 AA++K+C Sbjct: 40 AAVIKEC 46>NP_115823 Length = 2809 Score = 16.2 bits (30), Expect = 5631 Identities = 4/9 (44%), Positives = 7/9 (77%) Query: 1 GAAIVKDCC 9 GA++ +CC Sbjct: 827 GASLRSECC 835>NP_001233 Length = 260 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 GAAIVKDC 8 G +VKDC Sbjct: 46 GTFLVKDC 53>XP_006722988 Length = 2818 Score = 16.2 bits (30), Expect = 5631 Identities = 4/9 (44%), Positives = 7/9 (77%) Query: 1 GAAIVKDCC 9 GA++ +CC Sbjct: 836 GASLRSECC 844>XP_005247330 Length = 497 Score = 16.2 bits (30), Expect = 5631 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 2 AAIVKDC 8 AA++K+C Sbjct: 40 AAVIKEC 46>XP_005246485 Length = 1158 Score = 16.2 bits (30), Expect = 5631 Identities = 4/6 (66%), Positives = 5/6 (83%) Query: 4 IVKDCC 9 +VK CC Sbjct: 645 VVKQCC 650>NP_037450 Length = 2229 Score = 15.8 bits (29), Expect = 7355 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 GAAIVKDC 8 G+AI+++C Sbjct: 1537 GSAIIENC 1544>NP_001274187 Length = 241 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 AAIVKDCC 9 AAI+ CC Sbjct: 34 AAIMVSCC 41>NP_001277247 Length = 706 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 GAAIVKDC 8 GA+ VK C Sbjct: 198 GASFVKSC 205>NP_065708 Length = 659 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 GAAIVKDC 8 GA+ VK C Sbjct: 151 GASFVKSC 158>NP_001277248 Length = 617 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 GAAIVKDC 8 GA+ VK C Sbjct: 109 GASFVKSC 116>NP_001274189 Length = 373 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 AAIVKDCC 9 AAI+ CC Sbjct: 166 AAIMVSCC 173>NP_001274188 Length = 373 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 AAIVKDCC 9 AAI+ CC Sbjct: 166 AAIMVSCC 173>NP_001011720 Length = 373 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 AAIVKDCC 9 AAI+ CC Sbjct: 166 AAIMVSCC 173>NP_001136205 Length = 587 Score = 15.8 bits (29), Expect = 7355 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 2 AAIVKDC 8 AA+++DC Sbjct: 156 AAVLRDC 162>XP_006726491 Length = 230 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 GAAIVKDC 8 GAA+ K C Sbjct: 38 GAALTKGC 45>XP_006716510 Length = 241 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 AAIVKDCC 9 AAI+ CC Sbjct: 34 AAIMVSCC 41>XP_006715877 Length = 230 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 GAAIVKDC 8 GAA+ K C Sbjct: 38 GAALTKGC 45>XP_006713045 Length = 587 Score = 15.8 bits (29), Expect = 7355 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 2 AAIVKDC 8 AA+++DC Sbjct: 156 AAVLRDC 162>XP_005264942 Length = 599 Score = 15.8 bits (29), Expect = 7355 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 2 AAIVKDC 8 AA+++DC Sbjct: 156 AAVLRDC 162>XP_005264941 Length = 599 Score = 15.8 bits (29), Expect = 7355 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 2 AAIVKDC 8 AA+++DC Sbjct: 156 AAVLRDC 162>XP_006710244 Length = 230 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 GAAIVKDC 8 GAA+ K C Sbjct: 38 GAALTKGC 45>NP_620482 Length = 1341 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 GAAIVKDC 8 G+A V+DC Sbjct: 1143 GSAEVQDC 1150>NP_001077084 Length = 1314 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 GAAIVKDC 8 G+A V+DC Sbjct: 1116 GSAEVQDC 1123>NP_783322 Length = 476 Score = 15.4 bits (28), Expect = 9605 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 4 IVKDC 8 IVKDC Sbjct: 306 IVKDC 310>NP_001265331 Length = 254 Score = 15.4 bits (28), Expect = 9605 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 4 IVKDC 8 IVKDC Sbjct: 84 IVKDC 88>NP_001019818 Length = 254 Score = 15.4 bits (28), Expect = 9605 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 4 IVKDC 8 IVKDC Sbjct: 84 IVKDC 88>NP_783324 Length = 411 Score = 15.4 bits (28), Expect = 9605 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 4 IVKDC 8 IVKDC Sbjct: 306 IVKDC 310>NP_071901 Length = 460 Score = 15.4 bits (28), Expect = 9605 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 4 IVKDC 8 IVKDC Sbjct: 290 IVKDC 294>NP_783323 Length = 395 Score = 15.4 bits (28), Expect = 9605 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 4 IVKDC 8 IVKDC Sbjct: 290 IVKDC 294>NP_689986 Length = 142 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 3 AIVKDC 8 ++VKDC Sbjct: 42 SVVKDC 47>NP_001013860 Length = 1435 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 6/8 (75%) Query: 2 AAIVKDCC 9 AA+ + CC Sbjct: 422 AAVSRGCC 429>NP_057438 Length = 722 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 GAAIVKDC 8 G+A++K C Sbjct: 451 GSAVIKFC 458>XP_005260260 Length = 684 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 GAAIVKDC 8 G+A++K C Sbjct: 451 GSAVIKFC 458>XP_006721205 Length = 1441 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 6/8 (75%) Query: 2 AAIVKDCC 9 AA+ + CC Sbjct: 422 AAVSRGCC 429>XP_005255864 Length = 1372 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 6/8 (75%) Query: 2 AAIVKDCC 9 AA+ + CC Sbjct: 386 AAVSRGCC 393>XP_006721204 Length = 1405 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 6/8 (75%) Query: 2 AAIVKDCC 9 AA+ + CC Sbjct: 386 AAVSRGCC 393>XP_006721203 Length = 1408 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 6/8 (75%) Query: 2 AAIVKDCC 9 AA+ + CC Sbjct: 422 AAVSRGCC 429>XP_006721202 Length = 1424 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 6/8 (75%) Query: 2 AAIVKDCC 9 AA+ + CC Sbjct: 422 AAVSRGCC 429>XP_006721201 Length = 1430 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 6/8 (75%) Query: 2 AAIVKDCC 9 AA+ + CC Sbjct: 422 AAVSRGCC 429>XP_006719291 Length = 387 Score = 15.4 bits (28), Expect = 9605 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 4 IVKDC 8 IVKDC Sbjct: 340 IVKDC 344>XP_006719290 Length = 445 Score = 15.4 bits (28), Expect = 9605 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 4 IVKDC 8 IVKDC Sbjct: 340 IVKDC 344>XP_006719289 Length = 510 Score = 15.4 bits (28), Expect = 9605 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 4 IVKDC 8 IVKDC Sbjct: 340 IVKDC 344>XP_006712362 Length = 1350 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 GAAIVKDC 8 G+A V+DC Sbjct: 1152 GSAEVQDC 1159>NP_003183 Length = 346 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 AIVKDC 8 AIV+DC Sbjct: 279 AIVEDC 284Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.332 0.143 0.527 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 515,768 Number of extensions: 679 Number of successful extensions: 55 Number of sequences better than 10000.0: 55 Number of HSP's gapped: 55 Number of HSP's successfully gapped: 55 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.2 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |