Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_008835 19 869 NP_001075109 19 869 NP_006198 16 5631 NP_001268885 16 7355 NP_078907 16 7355 NP_115686 16 7355 XP_006726062 16 7355 XP_006725547 16 7355 XP_005271733 16 7355 XP_006718971 16 7355 XP_006718969 16 7355 XP_006718968 16 7355 XP_005271730 16 7355 XP_005252330 16 7355 XP_005264256 16 7355 XP_006712028 16 7355 NP_938017 16 7355 NP_002113 15 9605 NP_055726 15 9605 NP_000048 15 9605 NP_001274177 15 9605 NP_001274176 15 9605 NP_001274175 15 9605 NP_064440 15 9605 NP_001193830 15 9605 NP_060015 15 9605 NP_001073333 15 9605 XP_005275601 15 9605 XP_005275599 15 9605 XP_005275390 15 9605 XP_003846516 15 9605 XP_005275165 15 9605 XP_005275010 15 9605 XP_006720695 15 9605 XP_005249957 15 9605 XP_006715142 15 9605 XP_005246685 15 9605 XP_005246683 15 9605 XP_005276137 15 9605 XP_003120317 15 9605 NP_006015 15 9605 NP_009007 15 9605>NP_008835 Length = 4128 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 FYKLLYITV 9 FYKLL ITV Sbjct: 666 FYKLLSITV 674>NP_001075109 Length = 4097 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 FYKLLYITV 9 FYKLL ITV Sbjct: 666 FYKLLSITV 674>NP_006198 Length = 375 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 YKLLYITV 9 Y+LLY+ V Sbjct: 260 YQLLYVAV 267>NP_001268885 Length = 3631 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 FYKLLY 6 FYKLL+ Sbjct: 2720 FYKLLF 2725>NP_078907 Length = 507 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 FYKLLYITV 9 +YK L IT+ Sbjct: 320 YYKFLEITI 328>NP_115686 Length = 183 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 FYKLLYI 7 FY+ LYI Sbjct: 80 FYRALYI 86>XP_006726062 Length = 254 Score = 15.8 bits (29), Expect = 7355 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 FYKLLYITV 9 F+K+ Y+T+ Sbjct: 170 FFKISYLTL 178>XP_006725547 Length = 254 Score = 15.8 bits (29), Expect = 7355 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 FYKLLYITV 9 F+K+ Y+T+ Sbjct: 170 FFKISYLTL 178>XP_005271733 Length = 329 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 FYKLLYITV 9 +YK L IT+ Sbjct: 142 YYKFLEITI 150>XP_006718971 Length = 329 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 FYKLLYITV 9 +YK L IT+ Sbjct: 142 YYKFLEITI 150>XP_006718969 Length = 329 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 FYKLLYITV 9 +YK L IT+ Sbjct: 142 YYKFLEITI 150>XP_006718968 Length = 329 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 FYKLLYITV 9 +YK L IT+ Sbjct: 142 YYKFLEITI 150>XP_005271730 Length = 648 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 FYKLLYITV 9 +YK L IT+ Sbjct: 461 YYKFLEITI 469>XP_005252330 Length = 163 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 FYKLLYI 7 FY+ LYI Sbjct: 80 FYRALYI 86>XP_005264256 Length = 113 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 FYKLLYITV 9 +YK + ITV Sbjct: 75 YYKFIVITV 83>XP_006712028 Length = 183 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 FYKLLYITV 9 +YK + ITV Sbjct: 75 YYKFIVITV 83>NP_938017 Length = 198 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 FYKLLYITV 9 +YK + ITV Sbjct: 75 YYKFIVITV 83>NP_002113 Length = 255 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 FYKLLYIT 8 F+K+ Y+T Sbjct: 171 FFKISYLT 178>NP_055726 Length = 961 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 YKLLYITV 9 YKL Y T+ Sbjct: 253 YKLCYFTL 260>NP_000048 Length = 1417 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 KLLYIT 8 KLLY+T Sbjct: 761 KLLYVT 766>NP_001274177 Length = 1042 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 KLLYIT 8 KLLY+T Sbjct: 386 KLLYVT 391>NP_001274176 Length = 1286 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 KLLYIT 8 KLLY+T Sbjct: 761 KLLYVT 766>NP_001274175 Length = 1417 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 KLLYIT 8 KLLY+T Sbjct: 761 KLLYVT 766>NP_064440 Length = 255 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 FYKLLYIT 8 F+K+ Y+T Sbjct: 171 FFKISYLT 178>NP_001193830 Length = 747 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 6/8 (75%) Query: 1 FYKLLYIT 8 FY+ Y+T Sbjct: 99 FYQFCYVT 106>NP_060015 Length = 370 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 YKLLYITV 9 YK +++TV Sbjct: 152 YKAIFVTV 159>NP_001073333 Length = 747 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 6/8 (75%) Query: 1 FYKLLYIT 8 FY+ Y+T Sbjct: 99 FYQFCYVT 106>XP_005275601 Length = 208 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 FYKLLYIT 8 F+K+ Y+T Sbjct: 171 FFKISYLT 178>XP_005275599 Length = 255 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 FYKLLYIT 8 F+K+ Y+T Sbjct: 171 FFKISYLT 178>XP_005275390 Length = 208 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 FYKLLYIT 8 F+K+ Y+T Sbjct: 171 FFKISYLT 178>XP_003846516 Length = 255 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 FYKLLYIT 8 F+K+ Y+T Sbjct: 171 FFKISYLT 178>XP_005275165 Length = 254 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 FYKLLYIT 8 F+K+ Y+T Sbjct: 170 FFKISYLT 177>XP_005275010 Length = 254 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 FYKLLYIT 8 F+K+ Y+T Sbjct: 170 FFKISYLT 177>XP_006720695 Length = 763 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 KLLYIT 8 KLLY+T Sbjct: 107 KLLYVT 112>XP_005249957 Length = 682 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 6/8 (75%) Query: 1 FYKLLYIT 8 FY+ Y+T Sbjct: 99 FYQFCYVT 106>XP_006715142 Length = 206 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 FYKLLYIT 8 F+K+ Y+T Sbjct: 171 FFKISYLT 178>XP_005246685 Length = 354 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 YKLLYITV 9 Y+LL ITV Sbjct: 4 YRLLSITV 11>XP_005246683 Length = 387 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 YKLLYITV 9 Y+LL ITV Sbjct: 4 YRLLSITV 11>XP_005276137 Length = 254 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 FYKLLYIT 8 F+K+ Y+T Sbjct: 170 FFKISYLT 177>XP_003120317 Length = 254 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 FYKLLYIT 8 F+K+ Y+T Sbjct: 170 FFKISYLT 177>NP_006015 Length = 789 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 6/8 (75%) Query: 1 FYKLLYIT 8 FY+ Y+T Sbjct: 99 FYQFCYVT 106>NP_009007 Length = 458 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 YKLLYI 7 YKL+YI Sbjct: 357 YKLVYI 362Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.345 0.162 0.483 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 468,368 Number of extensions: 867 Number of successful extensions: 42 Number of sequences better than 10000.0: 42 Number of HSP's gapped: 42 Number of HSP's successfully gapped: 42 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.5 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.6 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |