Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_005091 20 390 NP_653080 20 390 XP_005267292 20 390 XP_005267291 20 390 XP_005267290 20 390 NP_957719 17 3301 NP_061004 17 3301 NP_003863 17 3301 NP_958436 17 3301 NP_957718 17 3301 NP_001186064 17 3301 NP_004171 17 3301 XP_005246991 17 3301 XP_005246990 17 3301 XP_005246268 17 3301 XP_005246267 17 3301 XP_005246265 17 3301 XP_005246264 17 3301 XP_005246263 17 3301 NP_001182728 17 4312 NP_001182727 17 4312 NP_000518 17 4312 NP_001182732 17 4312 NP_001182729 17 4312 NP_000101 16 5631 NP_775082 16 5631 NP_003377 16 5631 NP_078966 16 5631 NP_005821 16 5631 NP_001121182 16 5631 NP_001121181 16 5631 NP_001121180 16 5631 NP_005798 16 5631 XP_005244879 16 5631 XP_006711171 16 5631 XP_006710460 16 5631 XP_005270619 16 5631 NP_001073950 16 7355 NP_001186363 16 7355 XP_005267232 16 7355 XP_005267230 16 7355 XP_005267229 16 7355 XP_005267228 16 7355 XP_005267227 16 7355 XP_005267226 16 7355 NP_057185 16 7355 NP_783864 15 9605 XP_006715416 15 9605 XP_006715415 15 9605 XP_005266895 15 9605 XP_005262701 15 9605 XP_003846779 15 9605>NP_005091 Length = 1782 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 FVRTEETTT 9 FVRTEET T Sbjct: 1561 FVRTEETAT 1569>NP_653080 Length = 1684 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 FVRTEETTT 9 FVRTEET T Sbjct: 1463 FVRTEETAT 1471>XP_005267292 Length = 1677 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 FVRTEETTT 9 FVRTEET T Sbjct: 1456 FVRTEETAT 1464>XP_005267291 Length = 1684 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 FVRTEETTT 9 FVRTEET T Sbjct: 1463 FVRTEETAT 1471>XP_005267290 Length = 1782 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 FVRTEETTT 9 FVRTEET T Sbjct: 1561 FVRTEETAT 1569>NP_957719 Length = 901 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 VRTEETTT 9 V++EETTT Sbjct: 608 VKSEETTT 615>NP_061004 Length = 906 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 VRTEETTT 9 V++EETTT Sbjct: 608 VKSEETTT 615>NP_003863 Length = 926 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 VRTEETTT 9 V++EETTT Sbjct: 608 VKSEETTT 615>NP_958436 Length = 909 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 VRTEETTT 9 V++EETTT Sbjct: 608 VKSEETTT 615>NP_957718 Length = 931 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 VRTEETTT 9 V++EETTT Sbjct: 608 VKSEETTT 615>NP_001186064 Length = 425 Score = 16.9 bits (32), Expect = 3301 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 FVRTEET 7 FV+TEET Sbjct: 280 FVKTEET 286>NP_004171 Length = 425 Score = 16.9 bits (32), Expect = 3301 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 FVRTEET 7 FV+TEET Sbjct: 280 FVKTEET 286>XP_005246991 Length = 931 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 VRTEETTT 9 V++EETTT Sbjct: 608 VKSEETTT 615>XP_005246990 Length = 931 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 VRTEETTT 9 V++EETTT Sbjct: 608 VKSEETTT 615>XP_005246268 Length = 426 Score = 16.9 bits (32), Expect = 3301 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 FVRTEET 7 FV+TEET Sbjct: 281 FVKTEET 287>XP_005246267 Length = 426 Score = 16.9 bits (32), Expect = 3301 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 FVRTEET 7 FV+TEET Sbjct: 281 FVKTEET 287>XP_005246265 Length = 484 Score = 16.9 bits (32), Expect = 3301 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 FVRTEET 7 FV+TEET Sbjct: 339 FVKTEET 345>XP_005246264 Length = 532 Score = 16.9 bits (32), Expect = 3301 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 FVRTEET 7 FV+TEET Sbjct: 387 FVKTEET 393>XP_005246263 Length = 533 Score = 16.9 bits (32), Expect = 3301 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 FVRTEET 7 FV+TEET Sbjct: 388 FVKTEET 394>NP_001182728 Length = 819 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 VRTEETTT 9 VRT+ TTT Sbjct: 695 VRTQHTTT 702>NP_001182727 Length = 858 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 VRTEETTT 9 VRT+ TTT Sbjct: 736 VRTQHTTT 743>NP_000518 Length = 860 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 VRTEETTT 9 VRT+ TTT Sbjct: 736 VRTQHTTT 743>NP_001182732 Length = 682 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 VRTEETTT 9 VRT+ TTT Sbjct: 558 VRTQHTTT 565>NP_001182729 Length = 692 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 VRTEETTT 9 VRT+ TTT Sbjct: 568 VRTQHTTT 575>NP_000101 Length = 1025 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 FVRTEETTT 9 FVRTE+ T Sbjct: 408 FVRTEQDET 416>NP_775082 Length = 2721 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 TEETTT 9 TEETTT Sbjct: 665 TEETTT 670Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 TEETTT 9 TEETTT Sbjct: 826 TEETTT 831>NP_003377 Length = 2812 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 TEETTT 9 TEETTT Sbjct: 665 TEETTT 670Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 TEETTT 9 TEETTT Sbjct: 826 TEETTT 831>NP_078966 Length = 14507 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 FVRTEETTT 9 F +EETTT Sbjct: 5897 FPHSEETTT 5905>NP_005821 Length = 395 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 VRTEETT 8 VRTEET+ Sbjct: 75 VRTEETS 81>NP_001121182 Length = 1270 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 VRTEETTT 9 V T+ETTT Sbjct: 150 VETKETTT 157>NP_001121181 Length = 1311 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 VRTEETTT 9 V T+ETTT Sbjct: 191 VETKETTT 198>NP_001121180 Length = 1363 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 VRTEETTT 9 V T+ETTT Sbjct: 243 VETKETTT 250>NP_005798 Length = 1404 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 VRTEETTT 9 V T+ETTT Sbjct: 284 VETKETTT 291>XP_005244879 Length = 1361 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 VRTEETTT 9 V T+ETTT Sbjct: 241 VETKETTT 248>XP_006711171 Length = 1381 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 VRTEETTT 9 V T+ETTT Sbjct: 284 VETKETTT 291>XP_006710460 Length = 889 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 FVRTEETTT 9 FVRTE+ T Sbjct: 408 FVRTEQDET 416>XP_005270619 Length = 953 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 FVRTEETTT 9 FVRTE+ T Sbjct: 408 FVRTEQDET 416>NP_001073950 Length = 814 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 VRTEET 7 VRTEET Sbjct: 305 VRTEET 310>NP_001186363 Length = 133 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 FVRTEETTT 9 +VR EET T Sbjct: 125 YVRHEETLT 133>XP_005267232 Length = 437 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 VRTEET 7 VRTEET Sbjct: 305 VRTEET 310>XP_005267230 Length = 649 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 VRTEET 7 VRTEET Sbjct: 140 VRTEET 145>XP_005267229 Length = 721 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 VRTEET 7 VRTEET Sbjct: 305 VRTEET 310>XP_005267228 Length = 813 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 VRTEET 7 VRTEET Sbjct: 304 VRTEET 309>XP_005267227 Length = 814 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 VRTEET 7 VRTEET Sbjct: 305 VRTEET 310>XP_005267226 Length = 814 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 VRTEET 7 VRTEET Sbjct: 305 VRTEET 310>NP_057185 Length = 180 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 FVRTEETTT 9 +VR EET T Sbjct: 172 YVRHEETLT 180>NP_783864 Length = 1044 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 VRTEETT 8 V+TE+TT Sbjct: 425 VKTEDTT 431>XP_006715416 Length = 501 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 FVRTEET 7 FV++EET Sbjct: 480 FVKSEET 486>XP_006715415 Length = 501 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 FVRTEET 7 FV++EET Sbjct: 480 FVKSEET 486>XP_005266895 Length = 501 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 FVRTEET 7 FV++EET Sbjct: 480 FVKSEET 486>XP_005262701 Length = 1035 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 VRTEETT 8 V+TE+TT Sbjct: 425 VKTEDTT 431>XP_003846779 Length = 914 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 VRTEETTT 9 +RT ETT+ Sbjct: 142 IRTTETTS 149Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.309 0.117 0.298 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 440,933 Number of extensions: 609 Number of successful extensions: 54 Number of sequences better than 10000.0: 52 Number of HSP's gapped: 54 Number of HSP's successfully gapped: 54 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.6 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |