Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_008835 20 509 NP_001075109 20 509 NP_006234 19 869 NP_001186685 19 869 NP_001269109 19 869 NP_006237 19 869 NP_001269111 19 869 NP_001269110 19 869 NP_001269108 19 869 NP_001155197 18 1935 NP_848702 18 1935 NP_001155198 18 1935 NP_848701 18 1935 NP_002710 18 1935 XP_005267884 18 1935 XP_005267883 18 1935 XP_005267881 18 1935 XP_005267880 18 1935 XP_005267879 18 1935 XP_005267877 18 1935 XP_005267876 18 1935 NP_000937 17 3301 NP_003123 17 4312 NP_001136076 16 5631 NP_000301 16 5631 NP_060587 16 5631 XP_005270020 16 5631 XP_005270019 16 5631 XP_005251505 16 5631 XP_005251504 16 5631 XP_005271065 16 5631 XP_005271064 16 5631 NP_001010887 16 5631 NP_689737 15 9605 NP_004945 15 9605 NP_059672 15 9605 NP_001153518 15 9605 NP_001153505 15 9605 NP_001121902 15 9605 NP_001121901 15 9605 NP_001121167 15 9605 NP_001161066 15 9605 NP_064544 15 9605 NP_001241878 15 9605 NP_000188 15 9605 NP_000299 15 9605 NP_775899 15 9605 XP_006718509 15 9605 XP_006718505 15 9605 XP_006718504 15 9605 XP_005252027 15 9605 XP_006717157 15 9605 XP_006714339 15 9605 XP_006714338 15 9605 XP_005246402 15 9605 XP_006712393 15 9605 XP_005246401 15 9605>NP_008835 Length = 4128 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 FVRKSLNNI 9 FVRKSLN+I Sbjct: 68 FVRKSLNSI 76>NP_001075109 Length = 4097 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 FVRKSLNNI 9 FVRKSLN+I Sbjct: 68 FVRKSLNSI 76>NP_006234 Length = 486 Score = 18.9 bits (37), Expect = 869 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 FVRKSLNNI 9 F+RK +NNI Sbjct: 224 FIRKQINNI 232>NP_001186685 Length = 429 Score = 18.9 bits (37), Expect = 869 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 FVRKSLNNI 9 F+RK +NNI Sbjct: 167 FIRKQINNI 175>NP_001269109 Length = 462 Score = 18.9 bits (37), Expect = 869 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 FVRKSLNNI 9 F+RK +NNI Sbjct: 216 FIRKQINNI 224>NP_006237 Length = 467 Score = 18.9 bits (37), Expect = 869 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 FVRKSLNNI 9 F+RK +NNI Sbjct: 216 FIRKQINNI 224>NP_001269111 Length = 391 Score = 18.9 bits (37), Expect = 869 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 FVRKSLNNI 9 F+RK +NNI Sbjct: 140 FIRKQINNI 148>NP_001269110 Length = 391 Score = 18.9 bits (37), Expect = 869 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 FVRKSLNNI 9 F+RK +NNI Sbjct: 140 FIRKQINNI 148>NP_001269108 Length = 467 Score = 18.9 bits (37), Expect = 869 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 FVRKSLNNI 9 F+RK +NNI Sbjct: 216 FIRKQINNI 224>NP_001155197 Length = 555 Score = 17.7 bits (34), Expect = 1935 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 FVRKSLNNI 9 ++RK +NNI Sbjct: 230 YIRKQINNI 238>NP_848702 Length = 449 Score = 17.7 bits (34), Expect = 1935 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 FVRKSLNNI 9 ++RK +NNI Sbjct: 199 YIRKQINNI 207>NP_001155198 Length = 540 Score = 17.7 bits (34), Expect = 1935 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 FVRKSLNNI 9 ++RK +NNI Sbjct: 254 YIRKQINNI 262>NP_848701 Length = 485 Score = 17.7 bits (34), Expect = 1935 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 FVRKSLNNI 9 ++RK +NNI Sbjct: 199 YIRKQINNI 207>NP_002710 Length = 524 Score = 17.7 bits (34), Expect = 1935 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 FVRKSLNNI 9 ++RK +NNI Sbjct: 199 YIRKQINNI 207>XP_005267884 Length = 449 Score = 17.7 bits (34), Expect = 1935 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 FVRKSLNNI 9 ++RK +NNI Sbjct: 124 YIRKQINNI 132>XP_005267883 Length = 500 Score = 17.7 bits (34), Expect = 1935 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 FVRKSLNNI 9 ++RK +NNI Sbjct: 175 YIRKQINNI 183>XP_005267881 Length = 539 Score = 17.7 bits (34), Expect = 1935 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 FVRKSLNNI 9 ++RK +NNI Sbjct: 259 YIRKQINNI 267>XP_005267880 Length = 545 Score = 17.7 bits (34), Expect = 1935 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 FVRKSLNNI 9 ++RK +NNI Sbjct: 259 YIRKQINNI 267>XP_005267879 Length = 556 Score = 17.7 bits (34), Expect = 1935 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 FVRKSLNNI 9 ++RK +NNI Sbjct: 259 YIRKQINNI 267>XP_005267877 Length = 579 Score = 17.7 bits (34), Expect = 1935 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 FVRKSLNNI 9 ++RK +NNI Sbjct: 254 YIRKQINNI 262>XP_005267876 Length = 584 Score = 17.7 bits (34), Expect = 1935 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 FVRKSLNNI 9 ++RK +NNI Sbjct: 259 YIRKQINNI 267>NP_000937 Length = 420 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 FVRKSLNNI 9 F+RKS+N I Sbjct: 211 FIRKSINII 219>NP_003123 Length = 302 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 FVRKSLNNI 9 F RK+LN++ Sbjct: 293 FARKALNDV 301>NP_001136076 Length = 203 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 FVRKSLN 7 F+RK+LN Sbjct: 59 FIRKTLN 65>NP_000301 Length = 306 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 FVRKSLN 7 F+RK+LN Sbjct: 162 FIRKTLN 168>NP_060587 Length = 1224 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 VRKSLNNI 9 VR+S NNI Sbjct: 316 VRRSYNNI 323>XP_005270020 Length = 965 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 VRKSLNNI 9 VR+S NNI Sbjct: 57 VRRSYNNI 64>XP_005270019 Length = 965 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 VRKSLNNI 9 VR+S NNI Sbjct: 57 VRRSYNNI 64>XP_005251505 Length = 226 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 FVRKSLNNI 9 FV+ ++NNI Sbjct: 92 FVKPAINNI 100>XP_005251504 Length = 229 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 FVRKSLNNI 9 FV+ ++NNI Sbjct: 141 FVKPAINNI 149>XP_005271065 Length = 282 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 FVRKSLN 7 F+RK+LN Sbjct: 162 FIRKTLN 168>XP_005271064 Length = 339 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 FVRKSLN 7 F+RK+LN Sbjct: 162 FIRKTLN 168>NP_001010887 Length = 275 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 FVRKSLNNI 9 FV+ ++NNI Sbjct: 141 FVKPAINNI 149>NP_689737 Length = 1265 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 FVRKSLNNI 9 F+R LNN+ Sbjct: 95 FLRLKLNNL 103>NP_004945 Length = 724 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 FVRKSLN 7 FVR++LN Sbjct: 587 FVRRNLN 593>NP_059672 Length = 745 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 FVRKSLN 7 FVR++LN Sbjct: 608 FVRRNLN 614>NP_001153518 Length = 1261 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 FVRKSLNNI 9 F+R LNN+ Sbjct: 95 FLRLKLNNL 103>NP_001153505 Length = 1260 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 FVRKSLNNI 9 F+R LNN+ Sbjct: 95 FLRLKLNNL 103>NP_001121902 Length = 1028 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 2 VRKSLNNI 9 ++KS+NN+ Sbjct: 758 LKKSINNL 765>NP_001121901 Length = 1028 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 2 VRKSLNNI 9 ++KS+NN+ Sbjct: 758 LKKSINNL 765>NP_001121167 Length = 480 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 FVRKSLN 7 +VRK+LN Sbjct: 345 YVRKALN 351>NP_001161066 Length = 481 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 FVRKSLN 7 +VRK+LN Sbjct: 346 YVRKALN 352>NP_064544 Length = 1026 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 2 VRKSLNNI 9 ++KS+NN+ Sbjct: 758 LKKSINNL 765>NP_001241878 Length = 596 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 2 VRKSLNNI 9 ++KS+NN+ Sbjct: 328 LKKSINNL 335>NP_000188 Length = 310 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 FVRKSLNNI 9 FV++SLN + Sbjct: 251 FVKESLNYV 259>NP_000299 Length = 498 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 FVRKSLN 7 +VRK+LN Sbjct: 363 YVRKALN 369>NP_775899 Length = 4462 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 FVRKSLN 7 F+RKSL+ Sbjct: 877 FIRKSLS 883>XP_006718509 Length = 725 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 FVRKSLN 7 FVR++LN Sbjct: 588 FVRRNLN 594>XP_006718505 Length = 778 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 FVRKSLN 7 FVR++LN Sbjct: 641 FVRRNLN 647>XP_006718504 Length = 779 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 FVRKSLN 7 FVR++LN Sbjct: 642 FVRRNLN 648>XP_005252027 Length = 190 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 FVRKSLNNI 9 FV++SLN + Sbjct: 131 FVKESLNYV 139>XP_006717157 Length = 256 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 FVRKSLNNI 9 FV++SLN + Sbjct: 197 FVKESLNYV 205>XP_006714339 Length = 795 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 2 VRKSLNNI 9 ++KS+NN+ Sbjct: 525 LKKSINNL 532>XP_006714338 Length = 998 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 2 VRKSLNNI 9 ++KS+NN+ Sbjct: 728 LKKSINNL 735>XP_005246402 Length = 1265 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 FVRKSLNNI 9 F+R LNN+ Sbjct: 95 FLRLKLNNL 103>XP_006712393 Length = 1267 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 FVRKSLNNI 9 F+R LNN+ Sbjct: 101 FLRLKLNNL 109>XP_005246401 Length = 1271 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 FVRKSLNNI 9 F+R LNN+ Sbjct: 101 FLRLKLNNL 109Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.329 0.141 0.375 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 409,460 Number of extensions: 559 Number of successful extensions: 57 Number of sequences better than 10000.0: 57 Number of HSP's gapped: 57 Number of HSP's successfully gapped: 57 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.1 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |