Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_001245210 17 4312 NP_000242 17 4312 XP_005264389 17 4312 NP_000074 16 5631 NP_002179 16 5631 NP_001277675 16 7355 NP_001180575 16 7355 NP_036200 16 7355 NP_001002021 16 7355 NP_002617 16 7355 XP_005261194 16 7355 XP_005261193 16 7355 XP_005261192 16 7355 XP_006724075 16 7355 XP_006724074 16 7355 NP_001106964 15 9605 NP_001106963 15 9605 NP_001106965 15 9605 NP_006631 15 9605 NP_001106968 15 9605 NP_001106967 15 9605 NP_001106966 15 9605 NP_006054 15 9605 NP_038478 15 9605 NP_001276904 15 9605 NP_038477 15 9605 NP_112598 15 9605 XP_006721707 15 9605 XP_005257019 15 9605 XP_005257018 15 9605 XP_005257017 15 9605 XP_005257016 15 9605 XP_006721706 15 9605 XP_006719271 15 9605 XP_005268661 15 9605 XP_005268660 15 9605 XP_005268659 15 9605 XP_005268657 15 9605 XP_006719270 15 9605 XP_005268656 15 9605 XP_005268654 15 9605 XP_005268653 15 9605 XP_006712537 15 9605 XP_006712536 15 9605 XP_005246557 15 9605 XP_006712535 15 9605 XP_006712534 15 9605 XP_006712533 15 9605 XP_006712532 15 9605 XP_006712531 15 9605 XP_006712530 15 9605 XP_006712529 15 9605 XP_006712528 15 9605 XP_006712527 15 9605 XP_005246549 15 9605 XP_006712526 15 9605 XP_006712525 15 9605 XP_005246546 15 9605 XP_006712524 15 9605 XP_005246545 15 9605>NP_001245210 Length = 868 Score = 16.5 bits (31), Expect = 4312 Identities = 9/10 (90%), Positives = 9/10 (90%), Gaps = 1/10 (10%) Query: 1 FVKD-LLVRQ 9 FVKD LLVRQ Sbjct: 22 FVKDLLLVRQ 31>NP_000242 Length = 934 Score = 16.5 bits (31), Expect = 4312 Identities = 9/10 (90%), Positives = 9/10 (90%), Gaps = 1/10 (10%) Query: 1 FVKD-LLVRQ 9 FVKD LLVRQ Sbjct: 88 FVKDLLLVRQ 97>XP_005264389 Length = 921 Score = 16.5 bits (31), Expect = 4312 Identities = 9/10 (90%), Positives = 9/10 (90%), Gaps = 1/10 (10%) Query: 1 FVKD-LLVRQ 9 FVKD LLVRQ Sbjct: 88 FVKDLLLVRQ 97>NP_000074 Length = 988 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 FVKDLLVR 8 FV+D++VR Sbjct: 604 FVEDIMVR 611>NP_002179 Length = 146 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 FVKDLLV 7 FVKDLL+ Sbjct: 128 FVKDLLL 134>NP_001277675 Length = 282 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 FVKDLLV 7 +VKDLL+ Sbjct: 263 YVKDLLI 269>NP_001180575 Length = 282 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 FVKDLLV 7 +VKDLL+ Sbjct: 263 YVKDLLI 269>NP_036200 Length = 282 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 FVKDLLV 7 +VKDLL+ Sbjct: 263 YVKDLLI 269>NP_001002021 Length = 830 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 FVKDLLVRQ 9 +VKDL+V++ Sbjct: 328 YVKDLVVQR 336>NP_002617 Length = 780 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 FVKDLLVRQ 9 +VKDL+V++ Sbjct: 278 YVKDLVVQR 286>XP_005261194 Length = 751 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 FVKDLLVRQ 9 +VKDL+V++ Sbjct: 249 YVKDLVVQR 257>XP_005261193 Length = 774 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 FVKDLLVRQ 9 +VKDL+V++ Sbjct: 272 YVKDLVVQR 280>XP_005261192 Length = 803 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 FVKDLLVRQ 9 +VKDL+V++ Sbjct: 301 YVKDLVVQR 309>XP_006724075 Length = 830 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 FVKDLLVRQ 9 +VKDL+V++ Sbjct: 328 YVKDLVVQR 336>XP_006724074 Length = 853 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 FVKDLLVRQ 9 +VKDL+V++ Sbjct: 351 YVKDLVVQR 359>NP_001106964 Length = 422 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 FVKDLLVR 8 +++DLL+R Sbjct: 371 YLRDLLIR 378>NP_001106963 Length = 586 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 FVKDLLVR 8 +++DLL+R Sbjct: 535 YLRDLLIR 542>NP_001106965 Length = 579 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 FVKDLLVR 8 +++DLL+R Sbjct: 528 YLRDLLIR 535>NP_006631 Length = 568 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 FVKDLLVR 8 +++DLL+R Sbjct: 517 YLRDLLIR 524>NP_001106968 Length = 335 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 FVKDLLVR 8 +++DLL+R Sbjct: 284 YLRDLLIR 291>NP_001106967 Length = 474 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 FVKDLLVR 8 +++DLL+R Sbjct: 423 YLRDLLIR 430>NP_001106966 Length = 422 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 FVKDLLVR 8 +++DLL+R Sbjct: 371 YLRDLLIR 378>NP_006054 Length = 606 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 FVKDLLV 7 FVKDL++ Sbjct: 301 FVKDLIL 307>NP_038478 Length = 2168 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 VKDLLVR 8 V+DLLVR Sbjct: 1135 VQDLLVR 1141>NP_001276904 Length = 2132 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 VKDLLVR 8 V+DLLVR Sbjct: 1099 VQDLLVR 1105>NP_038477 Length = 1905 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 VKDLLVR 8 V+DLLVR Sbjct: 896 VQDLLVR 902>NP_112598 Length = 5088 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 KDLLVRQ 9 KDL+VR+ Sbjct: 1669 KDLIVRE 1675Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 KDLLVRQ 9 KDL+VR+ Sbjct: 2327 KDLIVRE 2333Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 KDLLVRQ 9 KDL+VR+ Sbjct: 2863 KDLIVRE 2869Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 KDLLVRQ 9 KDL+VR+ Sbjct: 3394 KDLIVRE 3400Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 KDLLVRQ 9 KDL+VR+ Sbjct: 3928 KDLIVRE 3934Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 KDLLVRQ 9 KDL+VR+ Sbjct: 4462 KDLIVRE 4468Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 KDLLVRQ 9 KDL+VR+ Sbjct: 4995 KDLIVRE 5001>XP_006721707 Length = 335 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 FVKDLLVR 8 +++DLL+R Sbjct: 284 YLRDLLIR 291>XP_005257019 Length = 335 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 FVKDLLVR 8 +++DLL+R Sbjct: 284 YLRDLLIR 291>XP_005257018 Length = 335 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 FVKDLLVR 8 +++DLL+R Sbjct: 284 YLRDLLIR 291>XP_005257017 Length = 335 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 FVKDLLVR 8 +++DLL+R Sbjct: 284 YLRDLLIR 291>XP_005257016 Length = 362 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 FVKDLLVR 8 +++DLL+R Sbjct: 311 YLRDLLIR 318>XP_006721706 Length = 422 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 FVKDLLVR 8 +++DLL+R Sbjct: 371 YLRDLLIR 378>XP_006719271 Length = 1555 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 VKDLLVR 8 V+DLLVR Sbjct: 915 VQDLLVR 921>XP_005268661 Length = 1657 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 VKDLLVR 8 V+DLLVR Sbjct: 648 VQDLLVR 654>XP_005268660 Length = 1875 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 VKDLLVR 8 V+DLLVR Sbjct: 866 VQDLLVR 872>XP_005268659 Length = 1894 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 VKDLLVR 8 V+DLLVR Sbjct: 885 VQDLLVR 891>XP_005268657 Length = 1903 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 VKDLLVR 8 V+DLLVR Sbjct: 894 VQDLLVR 900>XP_006719270 Length = 1903 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 VKDLLVR 8 V+DLLVR Sbjct: 894 VQDLLVR 900>XP_005268656 Length = 1903 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 VKDLLVR 8 V+DLLVR Sbjct: 894 VQDLLVR 900>XP_005268654 Length = 1923 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 VKDLLVR 8 V+DLLVR Sbjct: 915 VQDLLVR 921>XP_005268653 Length = 1924 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 VKDLLVR 8 V+DLLVR Sbjct: 915 VQDLLVR 921>XP_006712537 Length = 1952 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 VKDLLVR 8 V+DLLVR Sbjct: 1146 VQDLLVR 1152>XP_006712536 Length = 2082 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 VKDLLVR 8 V+DLLVR Sbjct: 1014 VQDLLVR 1020>XP_005246557 Length = 2095 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 VKDLLVR 8 V+DLLVR Sbjct: 1027 VQDLLVR 1033>XP_006712535 Length = 2095 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 VKDLLVR 8 V+DLLVR Sbjct: 1027 VQDLLVR 1033>XP_006712534 Length = 2114 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 VKDLLVR 8 V+DLLVR Sbjct: 1046 VQDLLVR 1052>XP_006712533 Length = 2116 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 VKDLLVR 8 V+DLLVR Sbjct: 1048 VQDLLVR 1054>XP_006712532 Length = 2141 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 VKDLLVR 8 V+DLLVR Sbjct: 1108 VQDLLVR 1114>XP_006712531 Length = 2169 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 VKDLLVR 8 V+DLLVR Sbjct: 1101 VQDLLVR 1107>XP_006712530 Length = 2176 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 VKDLLVR 8 V+DLLVR Sbjct: 1108 VQDLLVR 1114>XP_006712529 Length = 2179 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 VKDLLVR 8 V+DLLVR Sbjct: 1146 VQDLLVR 1152>XP_006712528 Length = 2180 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 VKDLLVR 8 V+DLLVR Sbjct: 1112 VQDLLVR 1118>XP_006712527 Length = 2203 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 VKDLLVR 8 V+DLLVR Sbjct: 1135 VQDLLVR 1141>XP_005246549 Length = 2212 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 VKDLLVR 8 V+DLLVR Sbjct: 1144 VQDLLVR 1150>XP_006712526 Length = 2212 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 VKDLLVR 8 V+DLLVR Sbjct: 1144 VQDLLVR 1150>XP_006712525 Length = 2212 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 VKDLLVR 8 V+DLLVR Sbjct: 1144 VQDLLVR 1150>XP_005246546 Length = 2214 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 VKDLLVR 8 V+DLLVR Sbjct: 1146 VQDLLVR 1152>XP_006712524 Length = 2214 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 VKDLLVR 8 V+DLLVR Sbjct: 1146 VQDLLVR 1152>XP_005246545 Length = 2214 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 VKDLLVR 8 V+DLLVR Sbjct: 1146 VQDLLVR 1152Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.342 0.156 0.419 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 472,417 Number of extensions: 760 Number of successful extensions: 66 Number of sequences better than 10000.0: 60 Number of HSP's gapped: 66 Number of HSP's successfully gapped: 66 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.5 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |