Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_000213 20 299 NP_001087241 20 299 XP_005265799 20 299 XP_005265798 20 299 XP_005265797 20 299 NP_872338 18 1135 XP_005270643 18 1135 NP_001182472 17 2528 NP_001182470 17 2528 NP_001182471 17 2528 NP_004164 17 2528 XP_006724372 17 2528 XP_005261774 17 2528 XP_005261773 17 2528 XP_006715883 17 2528 XP_005250145 17 2528 XP_005250144 17 2528 XP_005250143 17 2528 NP_001073283 17 3301 NP_006835 17 3301 XP_005259774 17 3301 XP_005253356 17 3301 XP_006719092 17 3301 NP_004160 17 4312 NP_683718 17 4312 NP_001268715 17 4312 NP_001186456 17 4312 NP_001186457 17 4312 XP_005256824 17 4312 NP_001004416 17 4312 NP_775839 17 4312 NP_001005407 16 5631 NP_066921 16 5631 NP_001034936 16 5631 NP_002076 16 5631 XP_006721032 16 5631 XP_006721031 16 5631 XP_006721030 16 5631 XP_006721029 16 5631 XP_006721028 16 5631 XP_006721027 16 5631 XP_005255709 16 5631 XP_006721026 16 5631 NP_612455 16 5631 NP_000117 16 7355 NP_002078 16 7355 NP_004798 16 7355 NP_001193976 16 7355 NP_647537 16 7355 NP_647538 16 7355 XP_005260918 16 7355 XP_005260917 16 7355 XP_005257310 16 7355 NP_001191 15 9605 NP_003465 15 9605 NP_001275902 15 9605 NP_690051 15 9605 NP_006038 15 9605 NP_001006617 15 9605 NP_569732 15 9605 NP_036303 15 9605 NP_001185769 15 9605 NP_001185767 15 9605 NP_001275903 15 9605 NP_001025226 15 9605 NP_001164 15 9605 NP_001166932 15 9605 NP_067673 15 9605 NP_001275904 15 9605 NP_001166933 15 9605 NP_997269 15 9605 XP_005267693 15 9605 XP_005267692 15 9605>NP_000213 Length = 976 Score = 20.4 bits (41), Expect = 299 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 FVIVAGTMC 9 FVIVAG MC Sbjct: 529 FVIVAGMMC 537>NP_001087241 Length = 972 Score = 20.4 bits (41), Expect = 299 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 FVIVAGTMC 9 FVIVAG MC Sbjct: 525 FVIVAGMMC 533>XP_005265799 Length = 973 Score = 20.4 bits (41), Expect = 299 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 FVIVAGTMC 9 FVIVAG MC Sbjct: 526 FVIVAGMMC 534>XP_005265798 Length = 976 Score = 20.4 bits (41), Expect = 299 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 FVIVAGTMC 9 FVIVAG MC Sbjct: 530 FVIVAGMMC 538>XP_005265797 Length = 977 Score = 20.4 bits (41), Expect = 299 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 FVIVAGTMC 9 FVIVAG MC Sbjct: 530 FVIVAGMMC 538>NP_872338 Length = 210 Score = 18.5 bits (36), Expect = 1135 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 VIVAGTMC 9 V+VAGT+C Sbjct: 27 VLVAGTLC 34>XP_005270643 Length = 205 Score = 18.5 bits (36), Expect = 1135 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 VIVAGTMC 9 V+VAGT+C Sbjct: 22 VLVAGTLC 29>NP_001182472 Length = 221 Score = 17.3 bits (33), Expect = 2528 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 IVAGTMC 9 IVAGT+C Sbjct: 162 IVAGTIC 168>NP_001182470 Length = 221 Score = 17.3 bits (33), Expect = 2528 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 IVAGTMC 9 IVAGT+C Sbjct: 162 IVAGTIC 168>NP_001182471 Length = 221 Score = 17.3 bits (33), Expect = 2528 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 IVAGTMC 9 IVAGT+C Sbjct: 162 IVAGTIC 168>NP_004164 Length = 635 Score = 17.3 bits (33), Expect = 2528 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 FVIVAGTMC 9 F++ AG++C Sbjct: 319 FIVAAGSIC 327>XP_006724372 Length = 343 Score = 17.3 bits (33), Expect = 2528 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 FVIVAGTMC 9 F++ AG++C Sbjct: 27 FIVAAGSIC 35>XP_005261774 Length = 635 Score = 17.3 bits (33), Expect = 2528 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 FVIVAGTMC 9 F++ AG++C Sbjct: 319 FIVAAGSIC 327>XP_005261773 Length = 635 Score = 17.3 bits (33), Expect = 2528 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 FVIVAGTMC 9 F++ AG++C Sbjct: 319 FIVAAGSIC 327>XP_006715883 Length = 221 Score = 17.3 bits (33), Expect = 2528 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 IVAGTMC 9 IVAGT+C Sbjct: 162 IVAGTIC 168>XP_005250145 Length = 221 Score = 17.3 bits (33), Expect = 2528 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 IVAGTMC 9 IVAGT+C Sbjct: 162 IVAGTIC 168>XP_005250144 Length = 221 Score = 17.3 bits (33), Expect = 2528 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 IVAGTMC 9 IVAGT+C Sbjct: 162 IVAGTIC 168>XP_005250143 Length = 236 Score = 17.3 bits (33), Expect = 2528 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 IVAGTMC 9 IVAGT+C Sbjct: 177 IVAGTIC 183>NP_001073283 Length = 183 Score = 16.9 bits (32), Expect = 3301 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 FVIVAGTMC 9 F++++GT C Sbjct: 16 FILLSGTRC 24>NP_006835 Length = 632 Score = 16.9 bits (32), Expect = 3301 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 2 VIVAGTMC 9 +++AGT+C Sbjct: 347 IVLAGTVC 354>XP_005259774 Length = 632 Score = 16.9 bits (32), Expect = 3301 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 2 VIVAGTMC 9 +++AGT+C Sbjct: 347 IVLAGTVC 354>XP_005253356 Length = 170 Score = 16.9 bits (32), Expect = 3301 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 FVIVAGTMC 9 F++++GT C Sbjct: 16 FILLSGTRC 24>XP_006719092 Length = 183 Score = 16.9 bits (32), Expect = 3301 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 FVIVAGTMC 9 F++++GT C Sbjct: 16 FILLSGTRC 24>NP_004160 Length = 483 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 VIVAGTMC 9 +I+AGT C Sbjct: 197 LIIAGTSC 204>NP_683718 Length = 444 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 VIVAGTMC 9 +I+AGT C Sbjct: 197 LIIAGTSC 204>NP_001268715 Length = 345 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 VIVAGTMC 9 +I+AGT C Sbjct: 59 LIIAGTSC 66>NP_001186456 Length = 1374 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 FVIVAGT 7 FV+VAGT Sbjct: 1337 FVLVAGT 1343>NP_001186457 Length = 1246 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 FVIVAGT 7 FV+VAGT Sbjct: 1209 FVLVAGT 1215>XP_005256824 Length = 483 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 VIVAGTMC 9 +I+AGT C Sbjct: 197 LIIAGTSC 204>NP_001004416 Length = 1318 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 FVIVAGT 7 FV+VAGT Sbjct: 1281 FVLVAGT 1287>NP_775839 Length = 1446 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 FVIVAGT 7 FV+VAGT Sbjct: 1409 FVLVAGT 1415>NP_001005407 Length = 2347 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 FVIVAGTM 8 F++VAG M Sbjct: 177 FIVVAGMM 184>NP_066921 Length = 2353 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 FVIVAGTM 8 F++VAG M Sbjct: 177 FIVVAGMM 184>NP_001034936 Length = 227 Score = 16.2 bits (30), Expect = 5631 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 VAGTMC 9 +AGTMC Sbjct: 24 LAGTMC 29>NP_002076 Length = 197 Score = 16.2 bits (30), Expect = 5631 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 VAGTMC 9 +AGTMC Sbjct: 24 LAGTMC 29>XP_006721032 Length = 1566 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 FVIVAGTM 8 F++VAG M Sbjct: 177 FIVVAGMM 184>XP_006721031 Length = 1612 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 FVIVAGTM 8 F++VAG M Sbjct: 177 FIVVAGMM 184>XP_006721030 Length = 1618 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 FVIVAGTM 8 F++VAG M Sbjct: 177 FIVVAGMM 184>XP_006721029 Length = 1820 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 FVIVAGTM 8 F++VAG M Sbjct: 177 FIVVAGMM 184>XP_006721028 Length = 2336 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 FVIVAGTM 8 F++VAG M Sbjct: 177 FIVVAGMM 184>XP_006721027 Length = 2342 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 FVIVAGTM 8 F++VAG M Sbjct: 177 FIVVAGMM 184>XP_005255709 Length = 2347 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 FVIVAGTM 8 F++VAG M Sbjct: 177 FIVVAGMM 184>XP_006721026 Length = 2358 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 FVIVAGTM 8 F++VAG M Sbjct: 177 FIVVAGMM 184>NP_612455 Length = 234 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 FVIVAGT 7 FVIV+GT Sbjct: 124 FVIVSGT 130>NP_000117 Length = 333 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 IVAGTMC 9 +VAGT C Sbjct: 54 LVAGTKC 60>NP_002078 Length = 593 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 IVAGTMC 9 +VAGT C Sbjct: 14 LVAGTRC 20>NP_004798 Length = 411 Score = 15.8 bits (29), Expect = 7355 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 2 VIVAGTMC 9 ++VAG++C Sbjct: 20 LVVAGSVC 27>NP_001193976 Length = 1156 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 VIVAGTM 8 VIV+GTM Sbjct: 444 VIVSGTM 450>NP_647537 Length = 1429 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 VIVAGTM 8 VIV+GTM Sbjct: 560 VIVSGTM 566>NP_647538 Length = 1272 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 VIVAGTM 8 VIV+GTM Sbjct: 560 VIVSGTM 566>XP_005260918 Length = 1111 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 VIVAGTM 8 VIV+GTM Sbjct: 560 VIVSGTM 566>XP_005260917 Length = 1289 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 VIVAGTM 8 VIV+GTM Sbjct: 560 VIVSGTM 566>XP_005257310 Length = 593 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 IVAGTMC 9 +VAGT C Sbjct: 14 LVAGTRC 20>NP_001191 Length = 396 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 IVAGTMC 9 +VAGT C Sbjct: 1 MVAGTRC 7>NP_003465 Length = 909 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 VIVAGTMC 9 +++AGT C Sbjct: 631 LVLAGTKC 638>NP_001275902 Length = 906 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 VIVAGTMC 9 +++AGT C Sbjct: 628 LVLAGTKC 635>NP_690051 Length = 932 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 IVAGTM 8 IVAGTM Sbjct: 12 IVAGTM 17>NP_006038 Length = 932 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 IVAGTM 8 IVAGTM Sbjct: 12 IVAGTM 17>NP_001006617 Length = 263 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 FVIVAGTM 8 FV+V G M Sbjct: 67 FVVVGGVM 74>NP_569732 Length = 329 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 FVIVAGTM 8 FV+V G M Sbjct: 67 FVVVGGVM 74>NP_036303 Length = 332 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 FVIVAGTM 8 FV+V G M Sbjct: 67 FVVVGGVM 74>NP_001185769 Length = 932 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 IVAGTM 8 IVAGTM Sbjct: 12 IVAGTM 17>NP_001185767 Length = 932 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 IVAGTM 8 IVAGTM Sbjct: 12 IVAGTM 17>NP_001275903 Length = 737 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 VIVAGTMC 9 +++AGT C Sbjct: 628 LVLAGTKC 635>NP_001025226 Length = 1502 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 VIVAGTMC 9 VI+A T C Sbjct: 194 VIIAATKC 201>NP_001164 Length = 1501 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 VIVAGTMC 9 VI+A T C Sbjct: 194 VIIAATKC 201>NP_001166932 Length = 500 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 FVIVAG 6 FVIVAG Sbjct: 187 FVIVAG 192>NP_067673 Length = 738 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 VIVAGTMC 9 +++AGT C Sbjct: 631 LVLAGTKC 638>NP_001275904 Length = 735 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 VIVAGTMC 9 +++AGT C Sbjct: 628 LVLAGTKC 635>NP_001166933 Length = 532 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 FVIVAG 6 FVIVAG Sbjct: 187 FVIVAG 192>NP_997269 Length = 551 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 FVIVAG 6 FVIVAG Sbjct: 187 FVIVAG 192>XP_005267693 Length = 1502 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 VIVAGTMC 9 VI+A T C Sbjct: 194 VIIAATKC 201>XP_005267692 Length = 1502 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 VIVAGTMC 9 VI+A T C Sbjct: 194 VIIAATKC 201Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.347 0.148 0.506 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 402,289 Number of extensions: 811 Number of successful extensions: 73 Number of sequences better than 10000.0: 73 Number of HSP's gapped: 73 Number of HSP's successfully gapped: 73 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 14 ( 7.0 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.8 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |