Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_722576 21 175 XP_005262424 21 175 NP_006802 17 3301 NP_945179 17 3301 NP_061146 16 5631 NP_954872 16 5631 NP_001080 16 7355 NP_004657 15 9605 NP_945349 15 9605 NP_067585 15 9605 NP_004318 15 9605 NP_001164509 15 9605 NP_058633 15 9605 NP_004034 15 9605 NP_001095937 15 9605 NP_060417 15 9605 NP_071337 15 9605 XP_006724996 15 9605 XP_006724562 15 9605 XP_005274609 15 9605 NP_001164510 15 9605 NP_001127694 15 9605 NP_150366 15 9605 NP_631948 15 9605>NP_722576 Length = 3080 Score = 21.2 bits (43), Expect = 175 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 FTSAFYENT 9 FTSAF+ENT Sbjct: 682 FTSAFHENT 690>XP_005262424 Length = 2875 Score = 21.2 bits (43), Expect = 175 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 FTSAFYENT 9 FTSAF+ENT Sbjct: 477 FTSAFHENT 485>NP_006802 Length = 473 Score = 16.9 bits (32), Expect = 3301 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 FTSAFY 6 FTSAFY Sbjct: 209 FTSAFY 214>NP_945179 Length = 473 Score = 16.9 bits (32), Expect = 3301 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 FTSAFY 6 FTSAFY Sbjct: 209 FTSAFY 214>NP_061146 Length = 852 Score = 16.2 bits (30), Expect = 5631 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 AFYENT 9 AFY+NT Sbjct: 810 AFYDNT 815>NP_954872 Length = 799 Score = 16.2 bits (30), Expect = 5631 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 AFYENT 9 AFY+NT Sbjct: 757 AFYDNT 762>NP_001080 Length = 1704 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 SAFYEN 8 S+FYEN Sbjct: 1262 SSFYEN 1267>NP_004657 Length = 513 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 FTSAFYEN 8 FT+A YE+ Sbjct: 25 FTAAVYEH 32>NP_945349 Length = 295 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 FTSAFY 6 FTSAF+ Sbjct: 194 FTSAFF 199>NP_067585 Length = 1227 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 5/8 (62%) Query: 1 FTSAFYEN 8 FT FY N Sbjct: 1096 FTDEFYPN 1103>NP_004318 Length = 1271 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 5/8 (62%) Query: 1 FTSAFYEN 8 FT FY N Sbjct: 1140 FTDEFYPN 1147>NP_001164509 Length = 373 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 5/6 (83%) Query: 4 AFYENT 9 AFY NT Sbjct: 82 AFYRNT 87>NP_058633 Length = 1462 Score = 15.4 bits (28), Expect = 9605 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 4 AFYEN 8 AFYEN Sbjct: 795 AFYEN 799>NP_004034 Length = 373 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 5/6 (83%) Query: 4 AFYENT 9 AFY NT Sbjct: 82 AFYRNT 87>NP_001095937 Length = 307 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 FTSAFY 6 FTSAF+ Sbjct: 206 FTSAFF 211>NP_060417 Length = 888 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 FTSAFYENT 9 FTS ENT Sbjct: 68 FTSDLMENT 76>NP_071337 Length = 408 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 5/6 (83%) Query: 1 FTSAFY 6 FT AFY Sbjct: 97 FTGAFY 102>XP_006724996 Length = 181 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 5/8 (62%) Query: 1 FTSAFYEN 8 FT FY N Sbjct: 26 FTDEFYPN 33>XP_006724562 Length = 1326 Score = 15.4 bits (28), Expect = 9605 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 4 AFYEN 8 AFYEN Sbjct: 659 AFYEN 663>XP_005274609 Length = 1468 Score = 15.4 bits (28), Expect = 9605 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 4 AFYEN 8 AFYEN Sbjct: 801 AFYEN 805>NP_001164510 Length = 298 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 5/6 (83%) Query: 4 AFYENT 9 AFY NT Sbjct: 82 AFYRNT 87>NP_001127694 Length = 471 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 FTSAFYEN 8 +TS FY N Sbjct: 384 YTSPFYGN 391>NP_150366 Length = 471 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 FTSAFYEN 8 +TS FY N Sbjct: 384 YTSPFYGN 391>NP_631948 Length = 553 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 TSAFYE 7 TSAFY+ Sbjct: 168 TSAFYD 173Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.319 0.125 0.361 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 484,909 Number of extensions: 830 Number of successful extensions: 24 Number of sequences better than 10000.0: 24 Number of HSP's gapped: 24 Number of HSP's successfully gapped: 24 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.9 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |