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Blast-Search of mutated query peptide against human proteome

BLASTP 2.2.15 [Oct-15-2006]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= User_input
         (9 letters)

Database: HUMAN_PROTEOME_FASTA 
           71,491 sequences; 45,948,801 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

NP_002430                                                              21     229
NP_001275896                                                           17    4312
NP_001275895                                                           17    4312
NP_001275894                                                           17    4312
NP_077817                                                              17    4312
NP_001275893                                                           17    4312
XP_005247869                                                           17    4312
XP_006713830                                                           17    4312
XP_005247867                                                           17    4312
XP_005247866                                                           17    4312
XP_005247863                                                           17    4312
XP_005247862                                                           17    4312
XP_005247861                                                           17    4312
XP_005247860                                                           17    4312
XP_005247859                                                           17    4312
NP_001268421                                                           16    5631
NP_000170                                                              16    5631
NP_001268422                                                           16    5631
NP_001268423                                                           16    5631
XP_005264328                                                           16    5631
NP_001268357                                                           16    7355
NP_036276                                                              16    7355
XP_006716820                                                           16    7355
XP_006716819                                                           16    7355
XP_006716818                                                           16    7355
NP_004585                                                              15    9605

>NP_002430
          Length = 1137

 Score = 20.8 bits (42), Expect =   229
 Identities = 8/9 (88%), Positives = 9/9 (100%)

Query: 1   FTRMGAANN 9
           FTRMGAA+N
Sbjct: 936 FTRMGAADN 944



>NP_001275896
          Length = 445

 Score = 16.5 bits (31), Expect =  4312
 Identities = 5/9 (55%), Positives = 7/9 (77%)

Query: 1   FTRMGAANN 9
           +TR+G  NN
Sbjct: 341 YTRLGEMNN 349



>NP_001275895
          Length = 554

 Score = 16.5 bits (31), Expect =  4312
 Identities = 5/9 (55%), Positives = 7/9 (77%)

Query: 1   FTRMGAANN 9
           +TR+G  NN
Sbjct: 493 YTRLGEMNN 501



>NP_001275894
          Length = 577

 Score = 16.5 bits (31), Expect =  4312
 Identities = 5/9 (55%), Positives = 7/9 (77%)

Query: 1   FTRMGAANN 9
           +TR+G  NN
Sbjct: 473 YTRLGEMNN 481



>NP_077817
          Length = 597

 Score = 16.5 bits (31), Expect =  4312
 Identities = 5/9 (55%), Positives = 7/9 (77%)

Query: 1   FTRMGAANN 9
           +TR+G  NN
Sbjct: 493 YTRLGEMNN 501



>NP_001275893
          Length = 579

 Score = 16.5 bits (31), Expect =  4312
 Identities = 5/9 (55%), Positives = 7/9 (77%)

Query: 1   FTRMGAANN 9
           +TR+G  NN
Sbjct: 475 YTRLGEMNN 483



>XP_005247869
          Length = 373

 Score = 16.5 bits (31), Expect =  4312
 Identities = 5/9 (55%), Positives = 7/9 (77%)

Query: 1   FTRMGAANN 9
           +TR+G  NN
Sbjct: 234 YTRLGEMNN 242



>XP_006713830
          Length = 456

 Score = 16.5 bits (31), Expect =  4312
 Identities = 5/9 (55%), Positives = 7/9 (77%)

Query: 1   FTRMGAANN 9
           +TR+G  NN
Sbjct: 317 YTRLGEMNN 325



>XP_005247867
          Length = 480

 Score = 16.5 bits (31), Expect =  4312
 Identities = 5/9 (55%), Positives = 7/9 (77%)

Query: 1   FTRMGAANN 9
           +TR+G  NN
Sbjct: 341 YTRLGEMNN 349



>XP_005247866
          Length = 552

 Score = 16.5 bits (31), Expect =  4312
 Identities = 5/9 (55%), Positives = 7/9 (77%)

Query: 1   FTRMGAANN 9
           +TR+G  NN
Sbjct: 493 YTRLGEMNN 501



>XP_005247863
          Length = 597

 Score = 16.5 bits (31), Expect =  4312
 Identities = 5/9 (55%), Positives = 7/9 (77%)

Query: 1   FTRMGAANN 9
           +TR+G  NN
Sbjct: 493 YTRLGEMNN 501



>XP_005247862
          Length = 598

 Score = 16.5 bits (31), Expect =  4312
 Identities = 5/9 (55%), Positives = 7/9 (77%)

Query: 1   FTRMGAANN 9
           +TR+G  NN
Sbjct: 493 YTRLGEMNN 501



>XP_005247861
          Length = 612

 Score = 16.5 bits (31), Expect =  4312
 Identities = 5/9 (55%), Positives = 7/9 (77%)

Query: 1   FTRMGAANN 9
           +TR+G  NN
Sbjct: 473 YTRLGEMNN 481



>XP_005247860
          Length = 632

 Score = 16.5 bits (31), Expect =  4312
 Identities = 5/9 (55%), Positives = 7/9 (77%)

Query: 1   FTRMGAANN 9
           +TR+G  NN
Sbjct: 493 YTRLGEMNN 501



>XP_005247859
          Length = 632

 Score = 16.5 bits (31), Expect =  4312
 Identities = 5/9 (55%), Positives = 7/9 (77%)

Query: 1   FTRMGAANN 9
           +TR+G  NN
Sbjct: 493 YTRLGEMNN 501



>NP_001268421
          Length = 1230

 Score = 16.2 bits (30), Expect =  5631
 Identities = 5/8 (62%), Positives = 8/8 (100%)

Query: 1    FTRMGAAN 8
            FTR+GA++
Sbjct: 1044 FTRLGASD 1051



>NP_000170
          Length = 1360

 Score = 16.2 bits (30), Expect =  5631
 Identities = 5/8 (62%), Positives = 8/8 (100%)

Query: 1    FTRMGAAN 8
            FTR+GA++
Sbjct: 1174 FTRLGASD 1181



>NP_001268422
          Length = 1058

 Score = 16.2 bits (30), Expect =  5631
 Identities = 5/8 (62%), Positives = 8/8 (100%)

Query: 1   FTRMGAAN 8
           FTR+GA++
Sbjct: 872 FTRLGASD 879



>NP_001268423
          Length = 1058

 Score = 16.2 bits (30), Expect =  5631
 Identities = 5/8 (62%), Positives = 8/8 (100%)

Query: 1   FTRMGAAN 8
           FTR+GA++
Sbjct: 872 FTRLGASD 879



>XP_005264328
          Length = 1261

 Score = 16.2 bits (30), Expect =  5631
 Identities = 5/8 (62%), Positives = 8/8 (100%)

Query: 1    FTRMGAAN 8
            FTR+GA++
Sbjct: 1075 FTRLGASD 1082



>NP_001268357
          Length = 703

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/9 (66%), Positives = 7/9 (77%)

Query: 1  FTRMGAANN 9
          FTR+  ANN
Sbjct: 66 FTRILTANN 74



>NP_036276
          Length = 699

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/9 (66%), Positives = 7/9 (77%)

Query: 1  FTRMGAANN 9
          FTR+  ANN
Sbjct: 66 FTRILTANN 74



>XP_006716820
          Length = 673

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/9 (66%), Positives = 7/9 (77%)

Query: 1  FTRMGAANN 9
          FTR+  ANN
Sbjct: 66 FTRILTANN 74



>XP_006716819
          Length = 730

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/9 (66%), Positives = 7/9 (77%)

Query: 1  FTRMGAANN 9
          FTR+  ANN
Sbjct: 66 FTRILTANN 74



>XP_006716818
          Length = 734

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/9 (66%), Positives = 7/9 (77%)

Query: 1  FTRMGAANN 9
          FTR+  ANN
Sbjct: 66 FTRILTANN 74



>NP_004585
          Length = 896

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/8 (62%), Positives = 6/8 (75%)

Query: 1   FTRMGAAN 8
           F  MG+AN
Sbjct: 227 FVEMGSAN 234



  Database: HUMAN_PROTEOME_FASTA
    Posted date:  May 26, 2014 10:46 AM
  Number of letters in database: 45,948,801
  Number of sequences in database:  71,491
  
Lambda     K      H
   0.322    0.125    0.366 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 71491
Number of Hits to DB: 347,359
Number of extensions: 419
Number of successful extensions: 26
Number of sequences better than 10000.0: 26
Number of HSP's gapped: 26
Number of HSP's successfully gapped: 26
Length of query: 9
Length of database: 45,948,801
Length adjustment: 0
Effective length of query: 9
Effective length of database: 45,948,801
Effective search space: 413539209
Effective search space used: 413539209
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 28 (16.0 bits)
S2: 28 (15.4 bits)