Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_722576 19 869 XP_005262424 19 869 XP_005259280 17 2528 XP_005259279 17 2528 NP_037494 17 2528 NP_543154 17 4312 NP_945185 16 7355 NP_001136175 16 7355 NP_001136176 16 7355 NP_004085 16 7355 NP_000867 16 7355 NP_060811 16 7355 NP_001265460 16 7355 NP_001265462 16 7355 NP_001265461 16 7355 NP_001258578 16 7355 NP_001258567 16 7355 NP_006515 16 7355 NP_001258568 16 7355 NP_612201 16 7355 NP_001026915 16 7355 XP_006725075 16 7355 XP_006725074 16 7355 XP_006725073 16 7355 XP_005262047 16 7355 XP_005262046 16 7355 XP_005262045 16 7355 XP_006721799 16 7355 XP_006721798 16 7355 XP_006721797 16 7355 XP_006721796 16 7355 XP_005267103 16 7355 XP_006715573 16 7355 XP_006715572 16 7355 NP_001005276 16 7355 NP_003382 15 9605 NP_064504 15 9605 NP_060821 15 9605 XP_005269081 15 9605 XP_006716172 15 9605 XP_005250558 15 9605>NP_722576 Length = 3080 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 FTKNSVVYT 9 FTKNSVV T Sbjct: 379 FTKNSVVST 387>XP_005262424 Length = 2875 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 FTKNSVVYT 9 FTKNSVV T Sbjct: 174 FTKNSVVST 182>XP_005259280 Length = 623 Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 FTKNSVVYT 9 FT+NS +YT Sbjct: 410 FTQNSQLYT 418>XP_005259279 Length = 706 Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 FTKNSVVYT 9 FT+NS +YT Sbjct: 493 FTQNSQLYT 501>NP_037494 Length = 706 Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 FTKNSVVYT 9 FT+NS +YT Sbjct: 493 FTQNSQLYT 501>NP_543154 Length = 325 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 TKNSVVY 8 TKN VVY Sbjct: 72 TKNGVVY 78>NP_945185 Length = 734 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 FTKNSVVY 8 F KN +VY Sbjct: 125 FNKNIIVY 132>NP_001136175 Length = 704 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 FTKNSVVY 8 F KN +VY Sbjct: 95 FNKNIIVY 102>NP_001136176 Length = 704 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 FTKNSVVY 8 F KN +VY Sbjct: 95 FNKNIIVY 102>NP_004085 Length = 315 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 FTKNSVVYT 9 FTK+ VY+ Sbjct: 102 FTKSKTVYS 110>NP_000867 Length = 2491 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 TKNSVVY 8 TKN+V+Y Sbjct: 58 TKNNVLY 64>NP_060811 Length = 678 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 FTKNSVVYT 9 +T+N V YT Sbjct: 626 YTENLVAYT 634>NP_001265460 Length = 631 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 FTKNSVVYT 9 +T+N V YT Sbjct: 579 YTENLVAYT 587>NP_001265462 Length = 605 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 FTKNSVVYT 9 +T+N V YT Sbjct: 553 YTENLVAYT 561>NP_001265461 Length = 552 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 FTKNSVVYT 9 +T+N V YT Sbjct: 500 YTENLVAYT 508>NP_001258578 Length = 172 Score = 15.8 bits (29), Expect = 7355 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 TKNSVVYT 9 TK+ ++YT Sbjct: 148 TKHQIIYT 155>NP_001258567 Length = 287 Score = 15.8 bits (29), Expect = 7355 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 TKNSVVYT 9 TK+ ++YT Sbjct: 263 TKHQIIYT 270>NP_006515 Length = 293 Score = 15.8 bits (29), Expect = 7355 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 TKNSVVYT 9 TK+ ++YT Sbjct: 269 TKHQIIYT 276>NP_001258568 Length = 319 Score = 15.8 bits (29), Expect = 7355 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 TKNSVVYT 9 TK+ ++YT Sbjct: 295 TKHQIIYT 302>NP_612201 Length = 404 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 FTKNSVVY 8 + KNS+VY Sbjct: 196 YLKNSLVY 203>NP_001026915 Length = 379 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 NSVVYT 9 NSV+YT Sbjct: 358 NSVIYT 363>XP_006725075 Length = 552 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 FTKNSVVYT 9 +T+N V YT Sbjct: 500 YTENLVAYT 508>XP_006725074 Length = 678 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 FTKNSVVYT 9 +T+N V YT Sbjct: 626 YTENLVAYT 634>XP_006725073 Length = 688 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 FTKNSVVYT 9 +T+N V YT Sbjct: 636 YTENLVAYT 644>XP_005262047 Length = 264 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 NSVVYT 9 NSV+YT Sbjct: 243 NSVIYT 248>XP_005262046 Length = 309 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 NSVVYT 9 NSV+YT Sbjct: 288 NSVIYT 293>XP_005262045 Length = 379 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 NSVVYT 9 NSV+YT Sbjct: 358 NSVIYT 363>XP_006721799 Length = 259 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 FTKNSVVY 8 + KNS+VY Sbjct: 51 YLKNSLVY 58>XP_006721798 Length = 268 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 FTKNSVVY 8 + KNS+VY Sbjct: 60 YLKNSLVY 67>XP_006721797 Length = 362 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 FTKNSVVY 8 + KNS+VY Sbjct: 154 YLKNSLVY 161>XP_006721796 Length = 396 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 FTKNSVVY 8 + KNS+VY Sbjct: 188 YLKNSLVY 195>XP_005267103 Length = 552 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 FTKNSVVYT 9 +T+N V YT Sbjct: 500 YTENLVAYT 508>XP_006715573 Length = 678 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 FTKNSVVYT 9 +T+N V YT Sbjct: 626 YTENLVAYT 634>XP_006715572 Length = 688 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 FTKNSVVYT 9 +T+N V YT Sbjct: 636 YTENLVAYT 644>NP_001005276 Length = 323 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 TKNSVVYT 9 T NS++YT Sbjct: 283 TLNSLIYT 290>NP_003382 Length = 360 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 TKNSVVY 8 TKN +VY Sbjct: 264 TKNDLVY 270>NP_064504 Length = 902 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 7/9 (77%) Query: 1 FTKNSVVYT 9 FT+ ++ YT Sbjct: 850 FTEGNITYT 858>NP_060821 Length = 1430 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 KNSVVYT 9 KN V+YT Sbjct: 1358 KNKVLYT 1364>XP_005269081 Length = 1389 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 KNSVVYT 9 KN V+YT Sbjct: 1358 KNKVLYT 1364>XP_006716172 Length = 331 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 TKNSVVY 8 TKN +VY Sbjct: 235 TKNDLVY 241>XP_005250558 Length = 1024 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 7/9 (77%) Query: 1 FTKNSVVYT 9 FT+ ++ YT Sbjct: 972 FTEGNITYT 980Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.318 0.125 0.342 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 433,719 Number of extensions: 900 Number of successful extensions: 41 Number of sequences better than 10000.0: 41 Number of HSP's gapped: 41 Number of HSP's successfully gapped: 41 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.8 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |