Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_005742 19 665 NP_671714 19 665 XP_006715890 19 665 XP_005250160 19 665 XP_005250159 19 665 NP_055259 17 2528 NP_001273343 17 2528 NP_001180401 17 4312 NP_001180400 17 4312 NP_001180402 17 4312 NP_001014986 17 4312 NP_004467 17 4312 NP_001171536 17 4312 NP_000379 17 4312 NP_710163 17 4312 XP_006718839 17 4312 XP_005252896 17 4312 XP_005247894 17 4312 XP_006713853 17 4312 XP_005247893 17 4312 XP_006713852 17 4312 NP_055211 16 5631 NP_005868 16 5631 NP_001005409 16 5631 NP_542198 16 5631 NP_003213 16 7355 NP_001091846 16 7355 NP_001010890 16 7355 NP_001009611 16 7355 NP_001139816 16 7355 NP_001013425 16 7355 NP_077816 16 7355 NP_695001 16 7355 NP_542138 16 7355 XP_006726395 16 7355 XP_005276181 16 7355 XP_005276180 16 7355 XP_005276179 16 7355 XP_006725019 16 7355 XP_006725018 16 7355 XP_006723606 16 7355 XP_006720682 16 7355 XP_005268318 16 7355 XP_006711146 16 7355 XP_006711145 16 7355 XP_006711143 16 7355 XP_006710315 16 7355 NP_001010889 16 7355 NP_001034612 15 9605 NP_000070 15 9605 NP_001243034 15 9605 NP_003383 15 9605 NP_002717 15 9605 NP_787036 15 9605 NP_787034 15 9605 NP_787033 15 9605 NP_001257620 15 9605 NP_066363 15 9605 XP_006723899 15 9605 XP_006723641 15 9605 XP_005267101 15 9605 XP_006713387 15 9605>NP_005742 Length = 3907 Score = 19.2 bits (38), Expect = 665 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 TEIISQFT 9 TEIISQFT Sbjct: 2818 TEIISQFT 2825>NP_671714 Length = 3899 Score = 19.2 bits (38), Expect = 665 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 TEIISQFT 9 TEIISQFT Sbjct: 2810 TEIISQFT 2817>XP_006715890 Length = 3860 Score = 19.2 bits (38), Expect = 665 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 TEIISQFT 9 TEIISQFT Sbjct: 2771 TEIISQFT 2778>XP_005250160 Length = 3939 Score = 19.2 bits (38), Expect = 665 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 TEIISQFT 9 TEIISQFT Sbjct: 2850 TEIISQFT 2857>XP_005250159 Length = 3952 Score = 19.2 bits (38), Expect = 665 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 TEIISQFT 9 TEIISQFT Sbjct: 2863 TEIISQFT 2870>NP_055259 Length = 666 Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 FTEIISQFT 9 FTE I Q+T Sbjct: 55 FTEFIEQYT 63>NP_001273343 Length = 667 Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 FTEIISQFT 9 FTE I Q+T Sbjct: 55 FTEFIEQYT 63>NP_001180401 Length = 704 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 FTEIISQFT 9 FTEI S+F+ Sbjct: 624 FTEIASKFS 632>NP_001180400 Length = 735 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 FTEIISQFT 9 FTEI S+F+ Sbjct: 624 FTEIASKFS 632>NP_001180402 Length = 442 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 FTEIISQFT 9 FTEI S+F+ Sbjct: 331 FTEIASKFS 339>NP_001014986 Length = 719 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 FTEIISQFT 9 FTEI S+F+ Sbjct: 639 FTEIASKFS 647>NP_004467 Length = 750 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 FTEIISQFT 9 FTEI S+F+ Sbjct: 639 FTEIASKFS 647>NP_001171536 Length = 1088 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 FTEIISQFT 9 F+E+ISQ++ Sbjct: 239 FSELISQYS 247>NP_000379 Length = 1078 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 FTEIISQFT 9 F+E+ISQ++ Sbjct: 239 FSELISQYS 247>NP_710163 Length = 442 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 FTEIISQFT 9 FTEI S+F+ Sbjct: 331 FTEIASKFS 339>XP_006718839 Length = 733 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 FTEIISQFT 9 FTEI S+F+ Sbjct: 622 FTEIASKFS 630>XP_005252896 Length = 582 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 FTEIISQFT 9 FTEI S+F+ Sbjct: 471 FTEIASKFS 479>XP_005247894 Length = 917 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 FTEIISQFT 9 F+E+ISQ++ Sbjct: 78 FSELISQYS 86>XP_006713853 Length = 1078 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 FTEIISQFT 9 F+E+ISQ++ Sbjct: 239 FSELISQYS 247>XP_005247893 Length = 1078 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 FTEIISQFT 9 F+E+ISQ++ Sbjct: 239 FSELISQYS 247>XP_006713852 Length = 1078 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 FTEIISQFT 9 F+E+ISQ++ Sbjct: 239 FSELISQYS 247>NP_055211 Length = 854 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 FTEIISQF 8 + EI+SQF Sbjct: 258 YVEIVSQF 265>NP_005868 Length = 793 Score = 16.2 bits (30), Expect = 5631 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 FTEIISQFT 9 FT+++ Q+T Sbjct: 208 FTKLVEQYT 216>NP_001005409 Length = 728 Score = 16.2 bits (30), Expect = 5631 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 FTEIISQFT 9 FT+++ Q+T Sbjct: 143 FTKLVEQYT 151>NP_542198 Length = 829 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 FTEIISQF 8 + EI+SQF Sbjct: 233 YVEIVSQF 240>NP_003213 Length = 450 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 FTEIISQ 7 FTE++SQ Sbjct: 362 FTELLSQ 368>NP_001091846 Length = 478 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 EIISQFT 9 EI++QFT Sbjct: 257 EIVTQFT 263>NP_001010890 Length = 478 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 EIISQFT 9 EI++QFT Sbjct: 257 EIVTQFT 263>NP_001009611 Length = 478 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 EIISQFT 9 EI++QFT Sbjct: 257 EIVTQFT 263>NP_001139816 Length = 478 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 EIISQFT 9 EI++QFT Sbjct: 257 EIVTQFT 263>NP_001013425 Length = 476 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 EIISQFT 9 EI++QFT Sbjct: 255 EIVTQFT 261>NP_077816 Length = 1499 Score = 15.8 bits (29), Expect = 7355 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 FTEIISQF 8 F+E++S+F Sbjct: 215 FSELVSEF 222>NP_695001 Length = 363 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 FTEIISQF 8 F EII QF Sbjct: 302 FREIIDQF 309>NP_542138 Length = 362 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 FTEIISQF 8 F EII QF Sbjct: 301 FREIIDQF 308>XP_006726395 Length = 477 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 EIISQFT 9 EI++QFT Sbjct: 256 EIVTQFT 262>XP_005276181 Length = 478 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 EIISQFT 9 EI++QFT Sbjct: 257 EIVTQFT 263>XP_005276180 Length = 478 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 EIISQFT 9 EI++QFT Sbjct: 257 EIVTQFT 263>XP_005276179 Length = 478 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 EIISQFT 9 EI++QFT Sbjct: 257 EIVTQFT 263>XP_006725019 Length = 478 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 EIISQFT 9 EI++QFT Sbjct: 257 EIVTQFT 263>XP_006725018 Length = 478 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 EIISQFT 9 EI++QFT Sbjct: 257 EIVTQFT 263>XP_006723606 Length = 310 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 FTEIISQF 8 F EII QF Sbjct: 249 FREIIDQF 256>XP_006720682 Length = 803 Score = 15.8 bits (29), Expect = 7355 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 FTEIISQF 8 F+E++S+F Sbjct: 215 FSELVSEF 222>XP_005268318 Length = 1499 Score = 15.8 bits (29), Expect = 7355 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 FTEIISQF 8 F+E++S+F Sbjct: 215 FSELVSEF 222>XP_006711146 Length = 478 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 EIISQFT 9 EI++QFT Sbjct: 257 EIVTQFT 263>XP_006711145 Length = 478 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 EIISQFT 9 EI++QFT Sbjct: 257 EIVTQFT 263>XP_006711143 Length = 478 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 EIISQFT 9 EI++QFT Sbjct: 257 EIVTQFT 263>XP_006710315 Length = 287 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 EIISQFT 9 EI++QFT Sbjct: 257 EIVTQFT 263>NP_001010889 Length = 476 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 EIISQFT 9 EI++QFT Sbjct: 255 EIVTQFT 261>NP_001034612 Length = 482 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 FTEIISQFT 9 FT+++ Q+T Sbjct: 150 FTKVLLQYT 158>NP_000070 Length = 457 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 FTEIISQFT 9 FT+++ Q+T Sbjct: 125 FTKVLLQYT 133>NP_001243034 Length = 365 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 TEIISQF 8 TEI+ QF Sbjct: 356 TEIVDQF 362>NP_003383 Length = 380 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 TEIISQF 8 TEI+ QF Sbjct: 371 TEIVDQF 377>NP_002717 Length = 710 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 TEIISQFT 9 TEI QFT Sbjct: 392 TEIFYQFT 399>NP_787036 Length = 532 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 TEIISQFT 9 TE++ QFT Sbjct: 396 TEMLRQFT 403>NP_787034 Length = 502 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 TEIISQFT 9 TE++ QFT Sbjct: 396 TEMLRQFT 403>NP_787033 Length = 555 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 TEIISQFT 9 TE++ QFT Sbjct: 449 TEMLRQFT 456>NP_001257620 Length = 585 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 TEIISQFT 9 TE++ QFT Sbjct: 449 TEMLRQFT 456>NP_066363 Length = 1918 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 TEIISQFT 9 +EI+ QFT Sbjct: 686 SEILKQFT 693>XP_006723899 Length = 1918 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 TEIISQFT 9 +EI+ QFT Sbjct: 686 SEILKQFT 693>XP_006723641 Length = 555 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 TEIISQFT 9 TE++ QFT Sbjct: 449 TEMLRQFT 456>XP_005267101 Length = 449 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 TEIISQFT 9 TEI QFT Sbjct: 392 TEIFYQFT 399>XP_006713387 Length = 365 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 TEIISQF 8 TEI+ QF Sbjct: 356 TEIVDQF 362Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.333 0.140 0.371 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 359,975 Number of extensions: 658 Number of successful extensions: 62 Number of sequences better than 10000.0: 62 Number of HSP's gapped: 62 Number of HSP's successfully gapped: 62 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.3 bits) S2: 28 (15.4 bits)
|
CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |