Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_722576 18 1482 XP_005262424 18 1482 NP_071940 17 4312 XP_005268066 17 4312 NP_001182726 16 5631 NP_056179 16 5631 NP_009107 16 7355 NP_001273081 16 7355 NP_938016 16 7355 NP_001161142 16 7355 XP_005260691 16 7355 XP_006723597 16 7355 XP_005260690 16 7355 XP_006718838 16 7355 NP_001265713 15 9605 NP_005818 15 9605 NP_001615 15 9605 NP_909119 15 9605 NP_057537 15 9605 XP_005256986 15 9605 XP_006721695 15 9605 XP_005266896 15 9605 XP_005265280 15 9605 XP_006713268 15 9605 XP_005245101 15 9605>NP_722576 Length = 3080 Score = 18.1 bits (35), Expect = 1482 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 FSTLLSSV 8 FSTLLSSV Sbjct: 1588 FSTLLSSV 1595>XP_005262424 Length = 2875 Score = 18.1 bits (35), Expect = 1482 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 FSTLLSSV 8 FSTLLSSV Sbjct: 1383 FSTLLSSV 1390>NP_071940 Length = 938 Score = 16.5 bits (31), Expect = 4312 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 1 FSTLLSS 7 FSTLLSS Sbjct: 348 FSTLLSS 354>XP_005268066 Length = 1172 Score = 16.5 bits (31), Expect = 4312 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 1 FSTLLSS 7 FSTLLSS Sbjct: 582 FSTLLSS 588>NP_001182726 Length = 130 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 FSTLLSSV 8 FSTL SS+ Sbjct: 7 FSTLFSSI 14>NP_056179 Length = 160 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 FSTLLSSV 8 FSTL SS+ Sbjct: 7 FSTLFSSI 14>NP_009107 Length = 140 Score = 15.8 bits (29), Expect = 7355 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 3 TLLSSVI 9 TLLSSVI Sbjct: 57 TLLSSVI 63>NP_001273081 Length = 223 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 FSTLLSSV 8 F T+LSSV Sbjct: 140 FGTMLSSV 147>NP_938016 Length = 235 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 FSTLLSSV 8 F T+LSSV Sbjct: 152 FGTMLSSV 159>NP_001161142 Length = 152 Score = 15.8 bits (29), Expect = 7355 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 FSTLLSSV 8 FSTLLS V Sbjct: 128 FSTLLSLV 135>XP_005260691 Length = 152 Score = 15.8 bits (29), Expect = 7355 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 FSTLLSSV 8 FSTLLS V Sbjct: 128 FSTLLSLV 135>XP_006723597 Length = 152 Score = 15.8 bits (29), Expect = 7355 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 FSTLLSSV 8 FSTLLS V Sbjct: 128 FSTLLSLV 135>XP_005260690 Length = 195 Score = 15.8 bits (29), Expect = 7355 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 FSTLLSSV 8 FSTLLS V Sbjct: 171 FSTLLSLV 178>XP_006718838 Length = 217 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 FSTLLSSV 8 F T+LSSV Sbjct: 134 FGTMLSSV 141>NP_001265713 Length = 255 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 FSTLLSSVI 9 F T+L+SVI Sbjct: 211 FFTILASVI 219>NP_005818 Length = 359 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 FSTLLSSVI 9 F T+L+SVI Sbjct: 315 FFTILASVI 323>NP_001615 Length = 1723 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 FSTLLSSV 8 FS+LLSS+ Sbjct: 835 FSSLLSSL 842>NP_909119 Length = 715 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 STLLSSVI 9 STL+SSV+ Sbjct: 469 STLVSSVL 476>NP_057537 Length = 722 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 STLLSSVI 9 STL+SSV+ Sbjct: 476 STLVSSVL 483>XP_005256986 Length = 255 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 FSTLLSSVI 9 F T+L+SVI Sbjct: 211 FFTILASVI 219>XP_006721695 Length = 393 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 FSTLLSSVI 9 F T+L+SVI Sbjct: 349 FFTILASVI 357>XP_005266896 Length = 2131 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 FSTLLSSV 8 FS+LLSS+ Sbjct: 1243 FSSLLSSL 1250>XP_005265280 Length = 644 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 STLLSSVI 9 STL+SSV+ Sbjct: 398 STLVSSVL 405>XP_006713268 Length = 695 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 STLLSSVI 9 STL+SSV+ Sbjct: 476 STLVSSVL 483>XP_005245101 Length = 469 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 FSTLLSSV 8 FST +SSV Sbjct: 43 FSTFVSSV 50Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.327 0.133 0.311 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 299,150 Number of extensions: 393 Number of successful extensions: 25 Number of sequences better than 10000.0: 25 Number of HSP's gapped: 25 Number of HSP's successfully gapped: 25 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.1 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |