Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_001257310 17 3301 XP_005273823 17 3301 NP_006736 16 5631 XP_005263233 16 5631 NP_036320 15 9605 NP_001184033 15 9605 NP_005924 15 9605 NP_001139114 15 9605 NP_055502 15 9605 NP_112558 15 9605 NP_002604 15 9605 NP_001248745 15 9605 XP_005255413 15 9605 XP_006713894 15 9605 XP_006713893 15 9605 XP_006713892 15 9605 XP_005269431 15 9605 XP_006713891 15 9605 XP_006713890 15 9605 XP_005275825 15 9605 XP_006710061 15 9605 XP_003960932 15 9605 XP_006710060 15 9605>NP_001257310 Length = 517 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 FSTASLAKE 9 FST+ +AKE Sbjct: 103 FSTSEIAKE 111>XP_005273823 Length = 758 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 FSTASLAKE 9 FST+ +AKE Sbjct: 344 FSTSEIAKE 352>NP_006736 Length = 293 Score = 16.2 bits (30), Expect = 5631 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 FSTASLAKE 9 FS+ASLA E Sbjct: 10 FSSASLAVE 18>XP_005263233 Length = 293 Score = 16.2 bits (30), Expect = 5631 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 FSTASLAKE 9 FS+ASLA E Sbjct: 10 FSSASLAVE 18>NP_036320 Length = 378 Score = 15.4 bits (28), Expect = 9605 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 STASLAKE 9 STASLA E Sbjct: 225 STASLALE 232>NP_001184033 Length = 3972 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 FSTASLAKE 9 FS+A AKE Sbjct: 632 FSSAKYAKE 640>NP_005924 Length = 3969 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 FSTASLAKE 9 FS+A AKE Sbjct: 632 FSSAKYAKE 640>NP_001139114 Length = 927 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 FSTASLAKE 9 F T LAKE Sbjct: 778 FKTCRLAKE 786>NP_055502 Length = 972 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 FSTASLAKE 9 F T LAKE Sbjct: 823 FKTCRLAKE 831>NP_112558 Length = 429 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 FSTASLAKE 9 FST LA+E Sbjct: 93 FSTVVLARE 101>NP_002604 Length = 556 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 FSTASLAKE 9 FST LA+E Sbjct: 93 FSTVVLARE 101>NP_001248745 Length = 454 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 FSTASLAKE 9 FST LA+E Sbjct: 93 FSTVVLARE 101>XP_005255413 Length = 529 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 FSTASLAKE 9 FST LA+E Sbjct: 66 FSTVVLARE 74>XP_006713894 Length = 845 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 FSTASLAKE 9 F T LAKE Sbjct: 696 FKTCRLAKE 704>XP_006713893 Length = 845 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 FSTASLAKE 9 F T LAKE Sbjct: 696 FKTCRLAKE 704>XP_006713892 Length = 952 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 FSTASLAKE 9 F T LAKE Sbjct: 803 FKTCRLAKE 811>XP_005269431 Length = 987 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 FSTASLAKE 9 F T LAKE Sbjct: 838 FKTCRLAKE 846>XP_006713891 Length = 997 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 FSTASLAKE 9 F T LAKE Sbjct: 848 FKTCRLAKE 856>XP_006713890 Length = 1012 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 FSTASLAKE 9 F T LAKE Sbjct: 863 FKTCRLAKE 871>XP_005275825 Length = 218 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 FSTASLAKE 9 FST LA+E Sbjct: 66 FSTVVLARE 74>XP_006710061 Length = 298 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 FSTASLAKE 9 FST LA+E Sbjct: 66 FSTVVLARE 74>XP_003960932 Length = 396 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 FSTASLAKE 9 FST LA+E Sbjct: 66 FSTVVLARE 74>XP_006710060 Length = 425 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 FSTASLAKE 9 FST LA+E Sbjct: 66 FSTVVLARE 74Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.302 0.108 0.248 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 242,242 Number of extensions: 323 Number of successful extensions: 23 Number of sequences better than 10000.0: 23 Number of HSP's gapped: 23 Number of HSP's successfully gapped: 23 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 17 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.4 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |