Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_001275701 20 509 NP_004561 20 509 NP_001275703 20 509 XP_005253450 20 509 XP_006719151 20 509 NP_003808 18 1935 NP_001189386 18 1935 NP_001189385 18 1935 NP_001026835 18 1935 XP_005273730 18 1935 XP_005273729 18 1935 XP_005273728 18 1935 XP_005273727 18 1935 XP_005273726 18 1935 XP_005273725 18 1935 NP_002499 17 3301 XP_006711834 17 3301 NP_004628 17 4312 NP_060579 17 4312 NP_060250 16 7355 NP_997191 16 7355 NP_001152956 16 7355 NP_001193830 16 7355 NP_060811 16 7355 NP_001265460 16 7355 NP_001265462 16 7355 NP_001265461 16 7355 NP_001193831 16 7355 NP_001073333 16 7355 XP_006725075 16 7355 XP_006725074 16 7355 XP_006725073 16 7355 XP_005251324 16 7355 XP_005251323 16 7355 XP_005249957 16 7355 XP_005267103 16 7355 XP_006715573 16 7355 XP_006715572 16 7355 XP_006711682 16 7355 NP_006015 16 7355 NP_000050 15 9605 NP_001008212 15 9605 NP_068815 15 9605 NP_001008214 15 9605 NP_001008213 15 9605 NP_653314 15 9605 NP_056323 15 9605 NP_001171646 15 9605 NP_001070254 15 9605 NP_065975 15 9605 NP_001171647 15 9605 NP_000997 15 9605 XP_006718388 15 9605 XP_006718387 15 9605 XP_006718386 15 9605 XP_005252395 15 9605 XP_005252394 15 9605 XP_005252393 15 9605 XP_006712016 15 9605>NP_001275701 Length = 1486 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 FSKKSSNQY 9 FSKKSSN Y Sbjct: 1254 FSKKSSNLY 1262>NP_004561 Length = 1445 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 FSKKSSNQY 9 FSKKSSN Y Sbjct: 1213 FSKKSSNLY 1221>NP_001275703 Length = 1264 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 FSKKSSNQY 9 FSKKSSN Y Sbjct: 1032 FSKKSSNLY 1040>XP_005253450 Length = 1486 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 FSKKSSNQY 9 FSKKSSN Y Sbjct: 1254 FSKKSSNLY 1262>XP_006719151 Length = 1486 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 FSKKSSNQY 9 FSKKSSN Y Sbjct: 1254 FSKKSSNLY 1262>NP_003808 Length = 754 Score = 17.7 bits (34), Expect = 1935 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 FSKKSSNQY 9 FSK S NQY Sbjct: 370 FSKCSQNQY 378>NP_001189386 Length = 651 Score = 17.7 bits (34), Expect = 1935 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 FSKKSSNQY 9 FS+KSS QY Sbjct: 462 FSRKSSLQY 470>NP_001189385 Length = 651 Score = 17.7 bits (34), Expect = 1935 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 FSKKSSNQY 9 FS+KSS QY Sbjct: 462 FSRKSSLQY 470>NP_001026835 Length = 651 Score = 17.7 bits (34), Expect = 1935 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 FSKKSSNQY 9 FS+KSS QY Sbjct: 462 FSRKSSLQY 470>XP_005273730 Length = 749 Score = 17.7 bits (34), Expect = 1935 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 FSKKSSNQY 9 FSK S NQY Sbjct: 370 FSKCSQNQY 378>XP_005273729 Length = 757 Score = 17.7 bits (34), Expect = 1935 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 FSKKSSNQY 9 FSK S NQY Sbjct: 370 FSKCSQNQY 378>XP_005273728 Length = 762 Score = 17.7 bits (34), Expect = 1935 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 FSKKSSNQY 9 FSK S NQY Sbjct: 370 FSKCSQNQY 378>XP_005273727 Length = 776 Score = 17.7 bits (34), Expect = 1935 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 FSKKSSNQY 9 FSK S NQY Sbjct: 370 FSKCSQNQY 378>XP_005273726 Length = 783 Score = 17.7 bits (34), Expect = 1935 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 FSKKSSNQY 9 FSK S NQY Sbjct: 370 FSKCSQNQY 378>XP_005273725 Length = 784 Score = 17.7 bits (34), Expect = 1935 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 FSKKSSNQY 9 FSK S NQY Sbjct: 370 FSKCSQNQY 378>NP_002499 Length = 1247 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 FSKKSSNQ 8 FSKK +NQ Sbjct: 207 FSKKENNQ 214>XP_006711834 Length = 1156 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 FSKKSSNQ 8 FSKK +NQ Sbjct: 207 FSKKENNQ 214>NP_004628 Length = 207 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 SKKSSNQY 9 +KK SNQY Sbjct: 30 NKKFSNQY 37>NP_060579 Length = 582 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 FSKKSSNQY 9 F+KK SN++ Sbjct: 541 FTKKKSNKF 549>NP_060250 Length = 2997 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 SKKSSNQ 8 SKKSSN+ Sbjct: 695 SKKSSNK 701>NP_997191 Length = 1888 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 SKKSSNQY 9 SK+ NQY Sbjct: 710 SKRKQNQY 717>NP_001152956 Length = 1736 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 SKKSSNQY 9 SK+ NQY Sbjct: 710 SKRKQNQY 717>NP_001193830 Length = 747 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 FSKKSSNQ 8 F+KK+ NQ Sbjct: 477 FTKKTGNQ 484>NP_060811 Length = 678 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 FSKKSSNQ 8 FSK+++NQ Sbjct: 382 FSKETTNQ 389>NP_001265460 Length = 631 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 FSKKSSNQ 8 FSK+++NQ Sbjct: 382 FSKETTNQ 389>NP_001265462 Length = 605 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 FSKKSSNQ 8 FSK+++NQ Sbjct: 382 FSKETTNQ 389>NP_001265461 Length = 552 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 FSKKSSNQ 8 FSK+++NQ Sbjct: 256 FSKETTNQ 263>NP_001193831 Length = 590 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 FSKKSSNQ 8 F+KK+ NQ Sbjct: 320 FTKKTGNQ 327>NP_001073333 Length = 747 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 FSKKSSNQ 8 F+KK+ NQ Sbjct: 477 FTKKTGNQ 484>XP_006725075 Length = 552 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 FSKKSSNQ 8 FSK+++NQ Sbjct: 256 FSKETTNQ 263>XP_006725074 Length = 678 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 FSKKSSNQ 8 FSK+++NQ Sbjct: 382 FSKETTNQ 389>XP_006725073 Length = 688 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 FSKKSSNQ 8 FSK+++NQ Sbjct: 392 FSKETTNQ 399>XP_005251324 Length = 2996 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 SKKSSNQ 8 SKKSSN+ Sbjct: 695 SKKSSNK 701>XP_005251323 Length = 2997 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 SKKSSNQ 8 SKKSSN+ Sbjct: 695 SKKSSNK 701>XP_005249957 Length = 682 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 FSKKSSNQ 8 F+KK+ NQ Sbjct: 477 FTKKTGNQ 484>XP_005267103 Length = 552 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 FSKKSSNQ 8 FSK+++NQ Sbjct: 256 FSKETTNQ 263>XP_006715573 Length = 678 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 FSKKSSNQ 8 FSK+++NQ Sbjct: 382 FSKETTNQ 389>XP_006715572 Length = 688 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 FSKKSSNQ 8 FSK+++NQ Sbjct: 392 FSKETTNQ 399>XP_006711682 Length = 1739 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 SKKSSNQY 9 SK+ NQY Sbjct: 561 SKRKQNQY 568>NP_006015 Length = 789 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 FSKKSSNQ 8 F+KK+ NQ Sbjct: 477 FTKKTGNQ 484>NP_000050 Length = 3418 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 FSKKSSNQ 8 F+K +SNQ Sbjct: 2457 FNKNNSNQ 2464>NP_001008212 Length = 577 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 FSKKSSNQ 8 F KK+SN+ Sbjct: 264 FEKKTSNR 271>NP_068815 Length = 577 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 FSKKSSNQ 8 F KK+SN+ Sbjct: 264 FEKKTSNR 271>NP_001008214 Length = 577 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 FSKKSSNQ 8 F KK+SN+ Sbjct: 264 FEKKTSNR 271>NP_001008213 Length = 577 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 FSKKSSNQ 8 F KK+SN+ Sbjct: 264 FEKKTSNR 271>NP_653314 Length = 573 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 FSKKSSN 7 FSK SSN Sbjct: 162 FSKTSSN 168>NP_056323 Length = 657 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 FSKKSS 6 FSKKSS Sbjct: 575 FSKKSS 580>NP_001171646 Length = 657 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 FSKKSS 6 FSKKSS Sbjct: 575 FSKKSS 580>NP_001070254 Length = 1735 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 FSKKSSNQ 8 FSK +SN+ Sbjct: 869 FSKSTSNE 876>NP_065975 Length = 441 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 SKKSSNQY 9 SKK NQ+ Sbjct: 196 SKKDQNQF 203>NP_001171647 Length = 657 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 FSKKSS 6 FSKKSS Sbjct: 575 FSKKSS 580>NP_000997 Length = 264 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 FSKKSSNQ 8 F+KK +NQ Sbjct: 142 FTKKRNNQ 149>XP_006718388 Length = 1331 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 FSKKSSNQ 8 FSK +SN+ Sbjct: 932 FSKSTSNE 939>XP_006718387 Length = 1798 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 FSKKSSNQ 8 FSK +SN+ Sbjct: 932 FSKSTSNE 939>XP_006718386 Length = 1822 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 FSKKSSNQ 8 FSK +SN+ Sbjct: 932 FSKSTSNE 939>XP_005252395 Length = 520 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 FSKKSSNQ 8 F KK+SN+ Sbjct: 207 FEKKTSNR 214>XP_005252394 Length = 571 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 FSKKSSNQ 8 F KK+SN+ Sbjct: 258 FEKKTSNR 265>XP_005252393 Length = 571 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 FSKKSSNQ 8 F KK+SN+ Sbjct: 258 FEKKTSNR 265>XP_006712016 Length = 593 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 FSKKSSN 7 FSK SSN Sbjct: 162 FSKTSSN 168Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.298 0.108 0.272 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 427,373 Number of extensions: 972 Number of successful extensions: 59 Number of sequences better than 10000.0: 59 Number of HSP's gapped: 59 Number of HSP's successfully gapped: 59 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 17 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.2 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |