Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_001257436 22 134 NP_001257437 22 134 NP_006281 22 134 XP_006715618 22 134 XP_005267176 22 134 NP_387450 17 2528 NP_004352 17 2528 NP_001004301 17 4312 NP_055061 17 4312 XP_006724446 17 4312 XP_006723069 17 4312 NP_001020402 16 5631 NP_001095886 16 5631 NP_002829 16 5631 NP_001139693 16 5631 XP_006719087 16 5631 XP_006711535 16 5631 NP_001189386 16 7355 NP_001189385 16 7355 NP_001026835 16 7355 NP_061825 15 9605 NP_001245283 15 9605 NP_004238 15 9605 NP_001245282 15 9605 NP_001136077 15 9605 NP_001099003 15 9605 NP_443159 15 9605 NP_079189 15 9605 NP_001253964 15 9605 XP_005257340 15 9605 XP_006721919 15 9605 XP_005257341 15 9605 XP_005265867 15 9605 XP_005265868 15 9605 XP_005265869 15 9605 XP_005265866 15 9605 XP_005265865 15 9605 XP_005265864 15 9605 NP_001124336 15 9605>NP_001257436 Length = 790 Score = 21.6 bits (44), Expect = 134 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 FSETTTMKC 9 FSETT MKC Sbjct: 470 FSETTAMKC 478>NP_001257437 Length = 790 Score = 21.6 bits (44), Expect = 134 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 FSETTTMKC 9 FSETT MKC Sbjct: 470 FSETTAMKC 478>NP_006281 Length = 790 Score = 21.6 bits (44), Expect = 134 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 FSETTTMKC 9 FSETT MKC Sbjct: 470 FSETTAMKC 478>XP_006715618 Length = 577 Score = 21.6 bits (44), Expect = 134 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 FSETTTMKC 9 FSETT MKC Sbjct: 257 FSETTAMKC 265>XP_005267176 Length = 790 Score = 21.6 bits (44), Expect = 134 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 FSETTTMKC 9 FSETT MKC Sbjct: 470 FSETTAMKC 478>NP_387450 Length = 785 Score = 17.3 bits (33), Expect = 2528 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 FSETTTMK 8 FS+TTT+K Sbjct: 358 FSDTTTVK 365>NP_004352 Length = 785 Score = 17.3 bits (33), Expect = 2528 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 FSETTTMK 8 FS+TTT+K Sbjct: 358 FSDTTTVK 365>NP_001004301 Length = 617 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 FSETTTMKC 9 FS+ T+KC Sbjct: 392 FSQELTLKC 400>NP_055061 Length = 3014 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 FSETTTMKC 9 F+E TT+ C Sbjct: 2040 FAEVTTLGC 2048>XP_006724446 Length = 3019 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 FSETTTMKC 9 F+E TT+ C Sbjct: 2040 FAEVTTLGC 2048>XP_006723069 Length = 533 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 FSETTTMKC 9 FS+ T+KC Sbjct: 392 FSQELTLKC 400>NP_001020402 Length = 579 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 SETTTMKC 9 S+TT +KC Sbjct: 67 SQTTQVKC 74>NP_001095886 Length = 644 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 FSETTTMKC 9 F +TT+ KC Sbjct: 606 FPDTTSPKC 614>NP_002829 Length = 1306 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 FSETTT 6 FSETTT Sbjct: 69 FSETTT 74>NP_001139693 Length = 340 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 FSETTTMKC 9 +SE+T KC Sbjct: 59 YSESTGQKC 67>XP_006719087 Length = 295 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 FSETTTMKC 9 +SE+T KC Sbjct: 59 YSESTGQKC 67>XP_006711535 Length = 1258 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 FSETTT 6 FSETTT Sbjct: 69 FSETTT 74>NP_001189386 Length = 651 Score = 15.8 bits (29), Expect = 7355 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 FSETTTMKC 9 FSE ++++C Sbjct: 322 FSEKSSLRC 330>NP_001189385 Length = 651 Score = 15.8 bits (29), Expect = 7355 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 FSETTTMKC 9 FSE ++++C Sbjct: 322 FSEKSSLRC 330>NP_001026835 Length = 651 Score = 15.8 bits (29), Expect = 7355 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 FSETTTMKC 9 FSE ++++C Sbjct: 322 FSEKSSLRC 330>NP_061825 Length = 224 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 5/9 (55%) Query: 1 FSETTTMKC 9 F ET KC Sbjct: 115 FGETEEQKC 123>NP_001245283 Length = 962 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 3 ETTTMKC 9 ET+++KC Sbjct: 658 ETSSLKC 664>NP_004238 Length = 972 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 3 ETTTMKC 9 ET+++KC Sbjct: 668 ETSSLKC 674>NP_001245282 Length = 972 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 3 ETTTMKC 9 ET+++KC Sbjct: 668 ETSSLKC 674>NP_001136077 Length = 937 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 3 ETTTMKC 9 ET+++KC Sbjct: 633 ETSSLKC 639>NP_001099003 Length = 783 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 FSETTTM 7 FSET+T+ Sbjct: 341 FSETSTL 347>NP_443159 Length = 560 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 FSETTTMKC 9 F E T +KC Sbjct: 225 FQEGTEVKC 233>NP_079189 Length = 1026 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 FSETTTM 7 FSET+T+ Sbjct: 341 FSETSTL 347>NP_001253964 Length = 520 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 FSETTTMKC 9 F E T +KC Sbjct: 225 FQEGTEVKC 233>XP_005257340 Length = 224 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 5/9 (55%) Query: 1 FSETTTMKC 9 F ET KC Sbjct: 115 FGETEEQKC 123>XP_006721919 Length = 224 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 5/9 (55%) Query: 1 FSETTTMKC 9 F ET KC Sbjct: 115 FGETEEQKC 123>XP_005257341 Length = 224 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 5/9 (55%) Query: 1 FSETTTMKC 9 F ET KC Sbjct: 115 FGETEEQKC 123>XP_005265867 Length = 538 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 FSETTTMKC 9 F E T +KC Sbjct: 8 FQEGTEVKC 16>XP_005265868 Length = 538 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 FSETTTMKC 9 F E T +KC Sbjct: 8 FQEGTEVKC 16>XP_005265869 Length = 538 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 FSETTTMKC 9 F E T +KC Sbjct: 8 FQEGTEVKC 16>XP_005265866 Length = 538 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 FSETTTMKC 9 F E T +KC Sbjct: 8 FQEGTEVKC 16>XP_005265865 Length = 538 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 FSETTTMKC 9 F E T +KC Sbjct: 8 FQEGTEVKC 16>XP_005265864 Length = 538 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 FSETTTMKC 9 F E T +KC Sbjct: 8 FQEGTEVKC 16>NP_001124336 Length = 755 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 FSETTTMKC 9 F E T +KC Sbjct: 225 FQEGTEVKC 233Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.320 0.116 0.357 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 468,064 Number of extensions: 963 Number of successful extensions: 39 Number of sequences better than 10000.0: 39 Number of HSP's gapped: 39 Number of HSP's successfully gapped: 39 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.0 bits) S2: 28 (15.4 bits)
|
CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |