Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_115927 19 665 XP_006715292 19 665 NP_002418 17 3301 NP_002413 17 3301 NP_002416 17 3301 NP_001093869 17 3301 XP_005262709 17 3301 NP_003038 17 4312 NP_071405 17 4312 NP_001106964 16 5631 NP_001106963 16 5631 NP_001106965 16 5631 NP_006631 16 5631 NP_001106968 16 5631 NP_001106967 16 5631 NP_001106966 16 5631 NP_008973 16 5631 NP_001275925 16 5631 NP_001108479 16 5631 NP_001108480 16 5631 NP_001275926 16 5631 NP_919258 16 5631 NP_653206 16 5631 NP_001147930 16 5631 XP_005276585 16 5631 XP_006721707 16 5631 XP_005257019 16 5631 XP_005257018 16 5631 XP_005257017 16 5631 XP_005257016 16 5631 XP_006721706 16 5631 XP_370934 16 5631 XP_006720909 16 5631 XP_005262809 16 5631 XP_006714144 16 5631 XP_005262807 16 5631 XP_005262806 16 5631 XP_001716413 16 5631 NP_001092253 16 5631 NP_000544 16 7355 NP_004786 16 7355 NP_055791 16 7355 NP_689669 16 7355 NP_001166242 16 7355 NP_001166243 16 7355 NP_002896 16 7355 NP_001186700 16 7355 XP_006719958 16 7355 XP_005269704 16 7355 NP_848551 16 7355 NP_001244336 15 9605 NP_000409 15 9605 NP_001018865 15 9605 NP_001018864 15 9605 NP_619639 15 9605 NP_733842 15 9605 NP_112192 15 9605 NP_001244335 15 9605 NP_001240605 15 9605 NP_006090 15 9605 NP_004856 15 9605 NP_631902 15 9605 NP_001276922 15 9605 NP_001120863 15 9605 XP_005255366 15 9605 XP_005255362 15 9605 XP_005247970 15 9605 XP_005247968 15 9605 XP_006712336 15 9605>NP_115927 Length = 1321 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 FRVVNVTPV 9 F VVNVTPV Sbjct: 338 FGVVNVTPV 346>XP_006715292 Length = 759 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 FRVVNVTPV 9 F VVNVTPV Sbjct: 325 FGVVNVTPV 333>NP_002418 Length = 471 Score = 16.9 bits (32), Expect = 3301 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 FRVVNVTP 8 +R+VN TP Sbjct: 120 YRIVNYTP 127>NP_002413 Length = 477 Score = 16.9 bits (32), Expect = 3301 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 FRVVNVTP 8 +R+VN TP Sbjct: 116 YRIVNYTP 123>NP_002416 Length = 476 Score = 16.9 bits (32), Expect = 3301 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 FRVVNVTP 8 +R+VN TP Sbjct: 115 YRIVNYTP 122>NP_001093869 Length = 1337 Score = 16.9 bits (32), Expect = 3301 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 RVVNVTPV 9 R+++VTPV Sbjct: 1203 RIISVTPV 1210>XP_005262709 Length = 1337 Score = 16.9 bits (32), Expect = 3301 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 RVVNVTPV 9 R+++VTPV Sbjct: 1203 RIISVTPV 1210>NP_003038 Length = 815 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 FRVVNVTP 8 FR+V +TP Sbjct: 439 FRIVKLTP 446>NP_071405 Length = 513 Score = 16.5 bits (31), Expect = 4312 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 FRVVNVTP 8 +R++N TP Sbjct: 113 YRIINYTP 120>NP_001106964 Length = 422 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 RVVNVTPV 9 +VVN+ PV Sbjct: 271 KVVNIVPV 278>NP_001106963 Length = 586 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 RVVNVTPV 9 +VVN+ PV Sbjct: 435 KVVNIVPV 442>NP_001106965 Length = 579 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 RVVNVTPV 9 +VVN+ PV Sbjct: 428 KVVNIVPV 435>NP_006631 Length = 568 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 RVVNVTPV 9 +VVN+ PV Sbjct: 417 KVVNIVPV 424>NP_001106968 Length = 335 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 RVVNVTPV 9 +VVN+ PV Sbjct: 184 KVVNIVPV 191>NP_001106967 Length = 474 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 RVVNVTPV 9 +VVN+ PV Sbjct: 323 KVVNIVPV 330>NP_001106966 Length = 422 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 RVVNVTPV 9 +VVN+ PV Sbjct: 271 KVVNIVPV 278>NP_008973 Length = 124 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 FRVVNVTP 8 FRV+ V+P Sbjct: 102 FRVIQVSP 109>NP_001275925 Length = 660 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 VVNVTPV 9 VVN TPV Sbjct: 305 VVNTTPV 311>NP_001108479 Length = 528 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 VVNVTPV 9 VVN TPV Sbjct: 173 VVNTTPV 179>NP_001108480 Length = 528 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 VVNVTPV 9 VVN TPV Sbjct: 173 VVNTTPV 179>NP_001275926 Length = 528 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 VVNVTPV 9 VVN TPV Sbjct: 173 VVNTTPV 179>NP_919258 Length = 749 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 VVNVTPV 9 VVN TPV Sbjct: 394 VVNTTPV 400>NP_653206 Length = 358 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 RVVNVTPV 9 R VNV PV Sbjct: 185 RTVNVVPV 192>NP_001147930 Length = 312 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 RVVNVTPV 9 R VNV PV Sbjct: 139 RTVNVVPV 146>XP_005276585 Length = 741 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 FRVVNVTP 8 FRVV+ TP Sbjct: 691 FRVVDPTP 698>XP_006721707 Length = 335 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 RVVNVTPV 9 +VVN+ PV Sbjct: 184 KVVNIVPV 191>XP_005257019 Length = 335 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 RVVNVTPV 9 +VVN+ PV Sbjct: 184 KVVNIVPV 191>XP_005257018 Length = 335 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 RVVNVTPV 9 +VVN+ PV Sbjct: 184 KVVNIVPV 191>XP_005257017 Length = 335 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 RVVNVTPV 9 +VVN+ PV Sbjct: 184 KVVNIVPV 191>XP_005257016 Length = 362 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 RVVNVTPV 9 +VVN+ PV Sbjct: 211 KVVNIVPV 218>XP_006721706 Length = 422 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 RVVNVTPV 9 +VVN+ PV Sbjct: 271 KVVNIVPV 278>XP_370934 Length = 741 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 FRVVNVTP 8 FRVV+ TP Sbjct: 691 FRVVDPTP 698>XP_006720909 Length = 358 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 RVVNVTPV 9 R VNV PV Sbjct: 185 RTVNVVPV 192>XP_005262809 Length = 546 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 VVNVTPV 9 VVN TPV Sbjct: 191 VVNTTPV 197>XP_006714144 Length = 749 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 VVNVTPV 9 VVN TPV Sbjct: 394 VVNTTPV 400>XP_005262807 Length = 749 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 VVNVTPV 9 VVN TPV Sbjct: 394 VVNTTPV 400>XP_005262806 Length = 767 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 VVNVTPV 9 VVN TPV Sbjct: 412 VVNTTPV 418>XP_001716413 Length = 764 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 FRVVNVTP 8 FRVV+ TP Sbjct: 714 FRVVDPTP 721>NP_001092253 Length = 124 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 FRVVNVTP 8 FRV+ V+P Sbjct: 102 FRVIQVSP 109>NP_000544 Length = 1432 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 FRVVNVTP 8 +R+V VTP Sbjct: 636 YRIVYVTP 643>NP_004786 Length = 1012 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 VNVTPV 9 VN+TPV Sbjct: 629 VNITPV 634>NP_055791 Length = 1871 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 RVVNVTP 8 RVV VTP Sbjct: 1236 RVVKVTP 1242>NP_689669 Length = 242 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 FRVVNVT 7 FR+ NVT Sbjct: 72 FRIANVT 78>NP_001166242 Length = 241 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 FRVVNVT 7 FR+ NVT Sbjct: 72 FRIANVT 78>NP_001166243 Length = 242 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 FRVVNVT 7 FR+ NVT Sbjct: 72 FRIANVT 78>NP_002896 Length = 318 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 RVVNVTPV 9 RV+N+T V Sbjct: 157 RVINITSV 164>NP_001186700 Length = 318 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 RVVNVTPV 9 RV+N+T V Sbjct: 157 RVINITSV 164>XP_006719958 Length = 705 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 VNVTPV 9 VN+TPV Sbjct: 322 VNITPV 327>XP_005269704 Length = 1872 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 RVVNVTP 8 RVV VTP Sbjct: 1236 RVVKVTP 1242>NP_848551 Length = 137 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 FRVVNVTPV 9 FR+ VTPV Sbjct: 71 FRIRPVTPV 79>NP_001244336 Length = 810 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 FRVVNVT 7 FR+ NVT Sbjct: 157 FRIYNVT 163>NP_000409 Length = 825 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 FRVVNVT 7 FR+ NVT Sbjct: 172 FRIYNVT 178>NP_001018865 Length = 465 Score = 15.4 bits (28), Expect = 9605 Identities = 3/7 (42%), Positives = 7/7 (100%) Query: 3 VVNVTPV 9 ++N+TP+ Sbjct: 35 IINITPL 41>NP_001018864 Length = 598 Score = 15.4 bits (28), Expect = 9605 Identities = 3/7 (42%), Positives = 7/7 (100%) Query: 3 VVNVTPV 9 ++N+TP+ Sbjct: 35 IINITPL 41>NP_619639 Length = 4074 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 RVVNVTPV 9 R+VNVT + Sbjct: 1081 RIVNVTVI 1088>NP_733842 Length = 3396 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 RVVNVTPV 9 R+VNVT + Sbjct: 1081 RIVNVTVI 1088>NP_112192 Length = 597 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 4 VNVTPV 9 +NVTP+ Sbjct: 115 INVTPI 120>NP_001244335 Length = 825 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 FRVVNVT 7 FR+ NVT Sbjct: 172 FRIYNVT 178>NP_001240605 Length = 186 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 FRVVNVTPV 9 F+VVNV V Sbjct: 100 FKVVNVLAV 108>NP_006090 Length = 628 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 RVVNVTPV 9 R +N+TP+ Sbjct: 240 RPINITPL 247>NP_004856 Length = 186 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 FRVVNVTPV 9 F+VVNV V Sbjct: 100 FKVVNVLAV 108>NP_631902 Length = 445 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 FRVVNVTP 8 + V+NV+P Sbjct: 78 YEVINVSP 85>NP_001276922 Length = 422 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 FRVVNVTP 8 + V+NV+P Sbjct: 78 YEVINVSP 85>NP_001120863 Length = 422 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 FRVVNVTP 8 + V+NV+P Sbjct: 78 YEVINVSP 85>XP_005255366 Length = 364 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 FRVVNVT 7 FR+ NVT Sbjct: 232 FRIYNVT 238>XP_005255362 Length = 885 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 FRVVNVT 7 FR+ NVT Sbjct: 232 FRIYNVT 238>XP_005247970 Length = 378 Score = 15.4 bits (28), Expect = 9605 Identities = 3/7 (42%), Positives = 7/7 (100%) Query: 3 VVNVTPV 9 ++N+TP+ Sbjct: 35 IINITPL 41>XP_005247968 Length = 474 Score = 15.4 bits (28), Expect = 9605 Identities = 3/7 (42%), Positives = 7/7 (100%) Query: 3 VVNVTPV 9 ++N+TP+ Sbjct: 35 IINITPL 41>XP_006712336 Length = 262 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 FRVVNVTP 8 + V+NV+P Sbjct: 78 YEVINVSP 85Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.335 0.146 0.433 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 459,508 Number of extensions: 808 Number of successful extensions: 69 Number of sequences better than 10000.0: 69 Number of HSP's gapped: 69 Number of HSP's successfully gapped: 69 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.3 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |