Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_004324 18 1482 NP_002871 18 1482 XP_005250103 18 1482 XP_005250102 18 1482 XP_005265416 18 1482 XP_005265415 18 1482 XP_005265414 18 1482 XP_005265412 18 1482 NP_001243125 17 3301 NP_001645 17 3301 XP_006724592 17 3301 NP_775859 17 4312 NP_001254542 16 5631 NP_001254539 16 5631 NP_001254543 16 5631 NP_722561 16 5631 NP_001254538 16 5631 NP_001254540 16 5631 NP_001254541 16 5631 XP_006711316 16 5631 XP_005245114 16 5631 XP_005245113 16 5631 XP_006711315 16 5631 XP_005245112 16 5631 XP_006711314 16 5631 NP_004450 16 7355 NP_872579 16 7355 XP_005257219 16 7355 XP_005257218 16 7355 XP_005257217 16 7355 XP_005257216 16 7355 XP_005257215 16 7355 XP_005257214 16 7355 XP_005257213 16 7355 XP_005257212 16 7355 XP_006721834 16 7355 XP_005257211 16 7355 XP_005257210 16 7355 XP_005257209 16 7355 XP_005257208 16 7355 XP_006721833 16 7355 XP_005257207 16 7355 XP_006719085 16 7355 XP_006719083 16 7355 NP_036204 15 9605 NP_005277 15 9605>NP_004324 Length = 766 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 FRLATVKSR 9 F LATVKSR Sbjct: 595 FGLATVKSR 603>NP_002871 Length = 648 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 FRLATVKSR 9 F LATVKSR Sbjct: 487 FGLATVKSR 495>XP_005250103 Length = 758 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 FRLATVKSR 9 F LATVKSR Sbjct: 595 FGLATVKSR 603>XP_005250102 Length = 767 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 FRLATVKSR 9 F LATVKSR Sbjct: 595 FGLATVKSR 603>XP_005265416 Length = 534 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 FRLATVKSR 9 F LATVKSR Sbjct: 373 FGLATVKSR 381>XP_005265415 Length = 567 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 FRLATVKSR 9 F LATVKSR Sbjct: 406 FGLATVKSR 414>XP_005265414 Length = 615 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 FRLATVKSR 9 F LATVKSR Sbjct: 454 FGLATVKSR 462>XP_005265412 Length = 648 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 FRLATVKSR 9 F LATVKSR Sbjct: 487 FGLATVKSR 495>NP_001243125 Length = 609 Score = 16.9 bits (32), Expect = 3301 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 FRLATVKSR 9 F LATVK+R Sbjct: 451 FGLATVKTR 459>NP_001645 Length = 606 Score = 16.9 bits (32), Expect = 3301 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 FRLATVKSR 9 F LATVK+R Sbjct: 448 FGLATVKTR 456>XP_006724592 Length = 611 Score = 16.9 bits (32), Expect = 3301 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 FRLATVKSR 9 F LATVK+R Sbjct: 453 FGLATVKTR 461>NP_775859 Length = 1326 Score = 16.5 bits (31), Expect = 4312 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 2 RLATVKS 8 RLATVKS Sbjct: 512 RLATVKS 518>NP_001254542 Length = 451 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 FRLATVKSR 9 FR+A VK+R Sbjct: 134 FRVARVKAR 142>NP_001254539 Length = 529 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 FRLATVKSR 9 FR+A VK+R Sbjct: 212 FRVARVKAR 220>NP_001254543 Length = 415 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 FRLATVKSR 9 FR+A VK+R Sbjct: 98 FRVARVKAR 106>NP_722561 Length = 529 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 FRLATVKSR 9 FR+A VK+R Sbjct: 212 FRVARVKAR 220>NP_001254538 Length = 549 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 FRLATVKSR 9 FR+A VK+R Sbjct: 232 FRVARVKAR 240>NP_001254540 Length = 546 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 FRLATVKSR 9 FR+A VK+R Sbjct: 229 FRVARVKAR 237>NP_001254541 Length = 397 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 FRLATVKSR 9 FR+A VK+R Sbjct: 80 FRVARVKAR 88>XP_006711316 Length = 529 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 FRLATVKSR 9 FR+A VK+R Sbjct: 212 FRVARVKAR 220>XP_005245114 Length = 529 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 FRLATVKSR 9 FR+A VK+R Sbjct: 212 FRVARVKAR 220>XP_005245113 Length = 529 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 FRLATVKSR 9 FR+A VK+R Sbjct: 212 FRVARVKAR 220>XP_006711315 Length = 529 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 FRLATVKSR 9 FR+A VK+R Sbjct: 212 FRVARVKAR 220>XP_005245112 Length = 549 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 FRLATVKSR 9 FR+A VK+R Sbjct: 232 FRVARVKAR 240>XP_006711314 Length = 552 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 FRLATVKSR 9 FR+A VK+R Sbjct: 235 FRVARVKAR 243>NP_004450 Length = 2903 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 FRLATVKS 8 +RL TVKS Sbjct: 1895 YRLQTVKS 1902>NP_872579 Length = 2920 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 FRLATVKS 8 +RL TVKS Sbjct: 1769 YRLQTVKS 1776>XP_005257219 Length = 2038 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 FRLATVKS 8 +RL TVKS Sbjct: 1895 YRLQTVKS 1902>XP_005257218 Length = 2957 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 FRLATVKS 8 +RL TVKS Sbjct: 1895 YRLQTVKS 1902>XP_005257217 Length = 2961 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 FRLATVKS 8 +RL TVKS Sbjct: 1895 YRLQTVKS 1902>XP_005257216 Length = 3015 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 FRLATVKS 8 +RL TVKS Sbjct: 1895 YRLQTVKS 1902>XP_005257215 Length = 3032 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 FRLATVKS 8 +RL TVKS Sbjct: 1769 YRLQTVKS 1776>XP_005257214 Length = 3094 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 FRLATVKS 8 +RL TVKS Sbjct: 1831 YRLQTVKS 1838>XP_005257213 Length = 3095 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 FRLATVKS 8 +RL TVKS Sbjct: 1832 YRLQTVKS 1839>XP_005257212 Length = 3095 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 FRLATVKS 8 +RL TVKS Sbjct: 1832 YRLQTVKS 1839>XP_006721834 Length = 3100 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 FRLATVKS 8 +RL TVKS Sbjct: 1895 YRLQTVKS 1902>XP_005257211 Length = 3100 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 FRLATVKS 8 +RL TVKS Sbjct: 1895 YRLQTVKS 1902>XP_005257210 Length = 3104 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 FRLATVKS 8 +RL TVKS Sbjct: 1895 YRLQTVKS 1902>XP_005257209 Length = 3148 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 FRLATVKS 8 +RL TVKS Sbjct: 1895 YRLQTVKS 1902>XP_005257208 Length = 3157 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 FRLATVKS 8 +RL TVKS Sbjct: 1894 YRLQTVKS 1901>XP_006721833 Length = 3158 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 FRLATVKS 8 +RL TVKS Sbjct: 1895 YRLQTVKS 1902>XP_005257207 Length = 3158 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 FRLATVKS 8 +RL TVKS Sbjct: 1895 YRLQTVKS 1902>XP_006719085 Length = 684 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 RLATVKSR 9 +LATVKS+ Sbjct: 625 QLATVKSK 632>XP_006719083 Length = 735 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 RLATVKSR 9 +LATVKS+ Sbjct: 676 QLATVKSK 683>NP_036204 Length = 652 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 LATVKSR 9 LATVKS+ Sbjct: 60 LATVKSK 66>NP_005277 Length = 333 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 LATVKSR 9 LATV+SR Sbjct: 147 LATVRSR 153Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.337 0.135 0.350 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 240,192 Number of extensions: 314 Number of successful extensions: 46 Number of sequences better than 10000.0: 46 Number of HSP's gapped: 46 Number of HSP's successfully gapped: 46 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.5 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |