Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_689966 18 1482 XP_005249005 18 1482 XP_005249004 18 1482 XP_005249003 18 1482 XP_005249000 18 1482 NP_008862 17 4312 NP_001273164 17 4312 NP_001273166 17 4312 NP_001273163 17 4312 NP_001273162 17 4312 NP_703150 17 4312 NP_001273165 17 4312 NP_001092908 17 4312 NP_001092907 17 4312 NP_919306 17 4312 XP_005253374 17 4312 XP_005253372 17 4312 NP_705834 17 4312 NP_689813 16 5631 NP_001269939 16 7355 NP_001269938 16 7355 NP_116575 16 7355 NP_057518 16 7355 NP_056036 16 7355 NP_570969 16 7355 NP_004810 16 7355 NP_001037853 16 7355 NP_001037852 16 7355 NP_077317 16 7355 XP_006723946 16 7355 XP_005259343 16 7355 XP_006717798 16 7355 XP_005276017 16 7355 NP_000375 15 9605 NP_443128 15 9605 NP_644810 15 9605 NP_056068 15 9605 NP_055692 15 9605 XP_005276647 15 9605 XP_005276648 15 9605 XP_006726767 15 9605 XP_005257947 15 9605 XP_005257946 15 9605 XP_005257945 15 9605 XP_006722277 15 9605 XP_005256630 15 9605 XP_005256629 15 9605>NP_689966 Length = 993 Score = 18.1 bits (35), Expect = 1482 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 RISSFLRP 9 ++SSFLRP Sbjct: 984 KVSSFLRP 991>XP_005249005 Length = 531 Score = 18.1 bits (35), Expect = 1482 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 RISSFLRP 9 ++SSFLRP Sbjct: 522 KVSSFLRP 529>XP_005249004 Length = 955 Score = 18.1 bits (35), Expect = 1482 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 RISSFLRP 9 ++SSFLRP Sbjct: 946 KVSSFLRP 953>XP_005249003 Length = 987 Score = 18.1 bits (35), Expect = 1482 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 RISSFLRP 9 ++SSFLRP Sbjct: 978 KVSSFLRP 985>XP_005249000 Length = 1009 Score = 18.1 bits (35), Expect = 1482 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 RISSFLRP 9 ++SSFLRP Sbjct: 1000 KVSSFLRP 1007>NP_008862 Length = 496 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 FRISSFLRP 9 FR+SS+ +P Sbjct: 261 FRVSSYRQP 269>NP_001273164 Length = 497 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 FRISSFLRP 9 FR+SS+ +P Sbjct: 262 FRVSSYRQP 270>NP_001273166 Length = 535 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 FRISSFLRP 9 FR+SS+ +P Sbjct: 300 FRVSSYRQP 308>NP_001273163 Length = 497 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 FRISSFLRP 9 FR+SS+ +P Sbjct: 262 FRVSSYRQP 270>NP_001273162 Length = 520 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 FRISSFLRP 9 FR+SS+ +P Sbjct: 285 FRVSSYRQP 293>NP_703150 Length = 520 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 FRISSFLRP 9 FR+SS+ +P Sbjct: 285 FRVSSYRQP 293>NP_001273165 Length = 411 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 FRISSFLRP 9 FR+SS+ +P Sbjct: 176 FRVSSYRQP 184>NP_001092908 Length = 624 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 FRISSFL 7 FR+SSFL Sbjct: 354 FRLSSFL 360Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 FRISSFL 7 FR++SFL Sbjct: 578 FRLNSFL 584>NP_001092907 Length = 624 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 FRISSFL 7 FR+SSFL Sbjct: 354 FRLSSFL 360Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 FRISSFL 7 FR++SFL Sbjct: 578 FRLNSFL 584>NP_919306 Length = 623 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 FRISSFL 7 FR+SSFL Sbjct: 353 FRLSSFL 359Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 FRISSFL 7 FR++SFL Sbjct: 577 FRLNSFL 583>XP_005253374 Length = 497 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 FRISSFLRP 9 FR+SS+ +P Sbjct: 262 FRVSSYRQP 270>XP_005253372 Length = 497 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 FRISSFLRP 9 FR+SS+ +P Sbjct: 262 FRVSSYRQP 270>NP_705834 Length = 594 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 RISSFLR 8 R+SSFLR Sbjct: 525 RVSSFLR 531>NP_689813 Length = 562 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 FRISSFLR 8 FR++S+LR Sbjct: 307 FRLASYLR 314>NP_001269939 Length = 996 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 RISSFLR 8 +ISSFLR Sbjct: 957 KISSFLR 963>NP_001269938 Length = 1300 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 RISSFLR 8 +ISSFLR Sbjct: 1180 KISSFLR 1186>NP_116575 Length = 1243 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 RISSFLR 8 +ISSFLR Sbjct: 1204 KISSFLR 1210>NP_057518 Length = 1219 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 RISSFLR 8 +ISSFLR Sbjct: 1180 KISSFLR 1186>NP_056036 Length = 1577 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 FRISSFLRP 9 F SSFL+P Sbjct: 1337 FVYSSFLKP 1345>NP_570969 Length = 605 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 RISSFLR 8 +ISSFLR Sbjct: 533 KISSFLR 539>NP_004810 Length = 1274 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 FRISSFLRP 9 FR+S L+P Sbjct: 544 FRLSDVLKP 552>NP_001037853 Length = 423 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 FRISSFLRP 9 F SS+LRP Sbjct: 238 FSNSSYLRP 246>NP_001037852 Length = 430 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 FRISSFLRP 9 F SS+LRP Sbjct: 245 FSNSSYLRP 253>NP_077317 Length = 430 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 FRISSFLRP 9 F SS+LRP Sbjct: 245 FSNSSYLRP 253>XP_006723946 Length = 1414 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 ISSFLRP 9 ++SFLRP Sbjct: 1386 LASFLRP 1392>XP_005259343 Length = 1274 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 FRISSFLRP 9 FR+S L+P Sbjct: 544 FRLSDVLKP 552>XP_006717798 Length = 1534 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 FRISSFLRP 9 F SSFL+P Sbjct: 1294 FVYSSFLKP 1302>XP_005276017 Length = 610 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 ISSFLRP 9 ++SFLRP Sbjct: 571 LASFLRP 577>NP_000375 Length = 4563 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 FRISSF 6 FR+SSF Sbjct: 1490 FRVSSF 1495>NP_443128 Length = 3487 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 RISSFLR 8 +ISSFLR Sbjct: 2081 QISSFLR 2087>NP_644810 Length = 951 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 FRISSFLRP 9 F+IS+ L P Sbjct: 205 FKISAILHP 213>NP_056068 Length = 575 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 FRISSFLR 8 FR+ FLR Sbjct: 6 FRLQKFLR 13>NP_055692 Length = 1942 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 FRISSFLR 8 +RI+SFL+ Sbjct: 62 YRIASFLQ 69>XP_005276647 Length = 596 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 ISSFLRP 9 +SS+LRP Sbjct: 119 VSSWLRP 125Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 ISSFLRP 9 +SS+LRP Sbjct: 252 VSSWLRP 258Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 ISSFLRP 9 +SS+LRP Sbjct: 404 VSSWLRP 410>XP_005276648 Length = 596 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 ISSFLRP 9 +SS+LRP Sbjct: 119 VSSWLRP 125Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 ISSFLRP 9 +SS+LRP Sbjct: 252 VSSWLRP 258Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 ISSFLRP 9 +SS+LRP Sbjct: 404 VSSWLRP 410>XP_006726767 Length = 615 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 ISSFLRP 9 +SS+LRP Sbjct: 119 VSSWLRP 125Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 ISSFLRP 9 +SS+LRP Sbjct: 252 VSSWLRP 258Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 ISSFLRP 9 +SS+LRP Sbjct: 404 VSSWLRP 410>XP_005257947 Length = 1935 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 FRISSFLR 8 +RI+SFL+ Sbjct: 62 YRIASFLQ 69>XP_005257946 Length = 1943 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 FRISSFLR 8 +RI+SFL+ Sbjct: 62 YRIASFLQ 69>XP_005257945 Length = 1969 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 FRISSFLR 8 +RI+SFL+ Sbjct: 62 YRIASFLQ 69>XP_006722277 Length = 1970 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 FRISSFLR 8 +RI+SFL+ Sbjct: 62 YRIASFLQ 69>XP_005256630 Length = 575 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 FRISSFLR 8 FR+ FLR Sbjct: 6 FRLQKFLR 13>XP_005256629 Length = 575 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 FRISSFLR 8 FR+ FLR Sbjct: 6 FRLQKFLR 13Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.346 0.154 0.473 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 434,703 Number of extensions: 827 Number of successful extensions: 56 Number of sequences better than 10000.0: 47 Number of HSP's gapped: 56 Number of HSP's successfully gapped: 56 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.5 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.7 bits) S2: 28 (15.4 bits)
CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |