Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_775771 20 390 NP_115927 20 390 XP_006720466 20 390 XP_005254230 20 390 XP_006720465 20 390 XP_005254228 20 390 XP_006715292 20 390 NP_001274523 16 5631 NP_001274522 16 5631 NP_001279 16 5631 NP_004268 16 5631 NP_001190981 16 5631 NP_001190980 16 5631 NP_002370 16 5631 NP_660295 16 5631 XP_006715337 16 5631 XP_005249541 16 5631 XP_005249540 16 5631 NP_001243342 15 9605 NP_001035196 15 9605 NP_115745 15 9605 NP_004808 15 9605 NP_001164101 15 9605 NP_963923 15 9605 NP_005525 15 9605 NP_001163886 15 9605 NP_055455 15 9605 NP_079461 15 9605 NP_004409 15 9605 NP_001154879 15 9605 XP_005261026 15 9605 XP_005257260 15 9605 XP_005257258 15 9605 XP_006721872 15 9605 XP_006721871 15 9605 XP_006721870 15 9605 XP_006721869 15 9605 XP_006719903 15 9605 XP_006719703 15 9605 XP_005254005 15 9605 XP_005252372 15 9605 XP_006717387 15 9605 XP_005252371 15 9605 XP_005252370 15 9605 XP_005252369 15 9605 XP_005252368 15 9605 XP_005247035 15 9605 XP_006712939 15 9605 XP_006712938 15 9605 XP_006712937 15 9605 XP_006712936 15 9605 XP_005247034 15 9605 NP_061953 15 9605 NP_001163885 15 9605 NP_001163887 15 9605>NP_775771 Length = 1244 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 FRGMVRYAS 9 FRG VRYAS Sbjct: 186 FRGTVRYAS 194>NP_115927 Length = 1321 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 FRGMVRYAS 9 FRG VRYAS Sbjct: 199 FRGTVRYAS 207>XP_006720466 Length = 1175 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 FRGMVRYAS 9 FRG VRYAS Sbjct: 117 FRGTVRYAS 125>XP_005254230 Length = 1175 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 FRGMVRYAS 9 FRG VRYAS Sbjct: 117 FRGTVRYAS 125>XP_006720465 Length = 1239 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 FRGMVRYAS 9 FRG VRYAS Sbjct: 181 FRGTVRYAS 189>XP_005254228 Length = 1250 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 FRGMVRYAS 9 FRG VRYAS Sbjct: 192 FRGTVRYAS 200>XP_006715292 Length = 759 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 FRGMVRYAS 9 FRG VRYAS Sbjct: 186 FRGTVRYAS 194>NP_001274523 Length = 241 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 FRGMVRYAS 9 FRG+ RY S Sbjct: 203 FRGVHRYLS 211>NP_001274522 Length = 241 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 FRGMVRYAS 9 FRG+ RY S Sbjct: 203 FRGVHRYLS 211>NP_001279 Length = 241 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 FRGMVRYAS 9 FRG+ RY S Sbjct: 203 FRGVHRYLS 211>NP_004268 Length = 323 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 FRGMVRYA 8 +RGMVR A Sbjct: 68 YRGMVRTA 75>NP_001190981 Length = 245 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 FRGMVRYA 8 +RGMVR A Sbjct: 68 YRGMVRTA 75>NP_001190980 Length = 300 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 FRGMVRYA 8 +RGMVR A Sbjct: 68 YRGMVRTA 75>NP_002370 Length = 496 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 GMVRYAS 9 GMV YAS Sbjct: 81 GMVNYAS 87>NP_660295 Length = 208 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 RGMVRYAS 9 RGMV Y S Sbjct: 131 RGMVMYTS 138>XP_006715337 Length = 266 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 FRGMVRYA 8 +RGMVR A Sbjct: 68 YRGMVRTA 75>XP_005249541 Length = 275 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 FRGMVRYA 8 +RGMVR A Sbjct: 20 YRGMVRTA 27>XP_005249540 Length = 310 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 FRGMVRYA 8 +RGMVR A Sbjct: 68 YRGMVRTA 75>NP_001243342 Length = 253 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 FRGMVR 6 FRGM+R Sbjct: 68 FRGMLR 73>NP_001035196 Length = 273 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 FRGMVR 6 FRGM+R Sbjct: 88 FRGMLR 93>NP_115745 Length = 273 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 FRGMVR 6 FRGM+R Sbjct: 88 FRGMLR 93>NP_004808 Length = 1190 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 FRGMVR 6 FRG+VR Sbjct: 563 FRGLVR 568>NP_001164101 Length = 993 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 FRGMVR 6 FRG+VR Sbjct: 563 FRGLVR 568>NP_963923 Length = 1043 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 FRGMVR 6 FRG+VR Sbjct: 563 FRGLVR 568>NP_005525 Length = 337 Score = 15.4 bits (28), Expect = 9605 Identities = 3/7 (42%), Positives = 7/7 (100%) Query: 1 FRGMVRY 7 +RG+++Y Sbjct: 273 YRGLIKY 279>NP_001163886 Length = 1157 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 FRGMVR 6 FRG+VR Sbjct: 567 FRGLVR 572>NP_055455 Length = 1199 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 GMVRYAS 9 G+VR+AS Sbjct: 785 GLVRFAS 791>NP_079461 Length = 1990 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 FRGMVRYA 8 +RG VRY+ Sbjct: 1705 YRGGVRYS 1712>NP_004409 Length = 314 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 FRGMVRYAS 9 F G+ RY S Sbjct: 213 FEGLFRYKS 221>NP_001154879 Length = 316 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 5/7 (71%) Query: 1 FRGMVRY 7 FRG V Y Sbjct: 288 FRGFVNY 294>XP_005261026 Length = 356 Score = 15.4 bits (28), Expect = 9605 Identities = 3/7 (42%), Positives = 7/7 (100%) Query: 1 FRGMVRY 7 +RG+++Y Sbjct: 292 YRGLIKY 298>XP_005257260 Length = 1990 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 FRGMVRYA 8 +RG VRY+ Sbjct: 1705 YRGGVRYS 1712>XP_005257258 Length = 2000 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 FRGMVRYA 8 +RG VRY+ Sbjct: 1715 YRGGVRYS 1722>XP_006721872 Length = 2037 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 FRGMVRYA 8 +RG VRY+ Sbjct: 1752 YRGGVRYS 1759>XP_006721871 Length = 2037 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 FRGMVRYA 8 +RG VRY+ Sbjct: 1752 YRGGVRYS 1759>XP_006721870 Length = 2064 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 FRGMVRYA 8 +RG VRY+ Sbjct: 1779 YRGGVRYS 1786>XP_006721869 Length = 2074 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 FRGMVRYA 8 +RG VRY+ Sbjct: 1789 YRGGVRYS 1796>XP_006719903 Length = 335 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 5/7 (71%) Query: 1 FRGMVRY 7 FRG V Y Sbjct: 307 FRGFVNY 313>XP_006719703 Length = 273 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 FRGMVR 6 FRGM+R Sbjct: 88 FRGMLR 93>XP_005254005 Length = 273 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 FRGMVR 6 FRGM+R Sbjct: 88 FRGMLR 93>XP_005252372 Length = 1102 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 FRGMVR 6 FRG+VR Sbjct: 622 FRGLVR 627>XP_006717387 Length = 1188 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 FRGMVR 6 FRG+VR Sbjct: 561 FRGLVR 566>XP_005252371 Length = 1194 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 FRGMVR 6 FRG+VR Sbjct: 567 FRGLVR 572>XP_005252370 Length = 1212 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 FRGMVR 6 FRG+VR Sbjct: 622 FRGLVR 627>XP_005252369 Length = 1213 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 FRGMVR 6 FRG+VR Sbjct: 586 FRGLVR 591>XP_005252368 Length = 1249 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 FRGMVR 6 FRG+VR Sbjct: 622 FRGLVR 627>XP_005247035 Length = 971 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 GMVRYAS 9 G+VR+AS Sbjct: 785 GLVRFAS 791>XP_006712939 Length = 972 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 GMVRYAS 9 G+VR+AS Sbjct: 785 GLVRFAS 791>XP_006712938 Length = 1138 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 GMVRYAS 9 G+VR+AS Sbjct: 785 GLVRFAS 791>XP_006712937 Length = 1199 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 GMVRYAS 9 G+VR+AS Sbjct: 785 GLVRFAS 791>XP_006712936 Length = 1199 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 GMVRYAS 9 G+VR+AS Sbjct: 785 GLVRFAS 791>XP_005247034 Length = 1199 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 GMVRYAS 9 G+VR+AS Sbjct: 785 GLVRFAS 791>NP_061953 Length = 336 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 5/7 (71%) Query: 1 FRGMVRY 7 FRG V Y Sbjct: 308 FRGFVNY 314>NP_001163885 Length = 1020 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 FRGMVR 6 FRG+VR Sbjct: 540 FRGLVR 545>NP_001163887 Length = 1221 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 FRGMVR 6 FRG+VR Sbjct: 594 FRGLVR 599Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.342 0.144 0.435 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 446,774 Number of extensions: 877 Number of successful extensions: 55 Number of sequences better than 10000.0: 55 Number of HSP's gapped: 55 Number of HSP's successfully gapped: 55 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.6 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |