Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_055068 17 3301 NP_001156750 17 3301 NP_001156751 17 3301 NP_009224 17 4312 NP_001239133 17 4312 NP_001002029 17 4312 NP_001229752 17 4312 NP_001258875 16 5631 NP_003053 16 5631 NP_644807 16 5631 NP_003774 16 5631 NP_004629 16 7355 NP_542417 16 7355 NP_003639 16 7355 NP_690618 16 7355 NP_001138899 16 7355 NP_001096045 16 7355 NP_443102 16 7355 XP_006726175 16 7355 XP_006726174 16 7355 XP_006726087 16 7355 XP_006726086 16 7355 XP_006725985 16 7355 XP_006725897 16 7355 XP_006725896 16 7355 XP_006725787 16 7355 XP_006725786 16 7355 XP_006725571 16 7355 XP_006725570 16 7355 XP_006715254 16 7355 XP_005246167 16 7355 XP_005246165 16 7355 XP_005246164 16 7355 NP_005088 15 9605 NP_060606 15 9605 NP_000179 15 9605 NP_277033 15 9605 NP_277032 15 9605 NP_277035 15 9605 NP_277031 15 9605 NP_001245380 15 9605 NP_872629 15 9605 NP_001245379 15 9605 XP_006721039 15 9605 XP_005255732 15 9605 XP_005270329 15 9605 XP_005269794 15 9605 XP_005269793 15 9605 XP_005269792 15 9605 XP_005266846 15 9605 XP_005266845 15 9605 XP_005266844 15 9605 NP_004194 15 9605>NP_055068 Length = 2725 Score = 16.9 bits (32), Expect = 3301 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 RGMKSETS 9 RGMKSE S Sbjct: 126 RGMKSEHS 133>NP_001156750 Length = 2732 Score = 16.9 bits (32), Expect = 3301 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 RGMKSETS 9 RGMKSE S Sbjct: 126 RGMKSEHS 133>NP_001156751 Length = 2731 Score = 16.9 bits (32), Expect = 3301 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 RGMKSETS 9 RGMKSE S Sbjct: 126 RGMKSEHS 133>NP_009224 Length = 1744 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 FRGMKSET 8 FRG++S+T Sbjct: 296 FRGLESQT 303>NP_001239133 Length = 1698 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 FRGMKSET 8 FRG++S+T Sbjct: 296 FRGLESQT 303>NP_001002029 Length = 1744 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 FRGMKSET 8 FRG++S+T Sbjct: 296 FRGLESQT 303>NP_001229752 Length = 1744 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 FRGMKSET 8 FRG++S+T Sbjct: 296 FRGLESQT 303>NP_001258875 Length = 1530 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 FRGMKSETS 9 F+G+KS TS Sbjct: 351 FQGLKSLTS 359>NP_003053 Length = 1523 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 FRGMKSETS 9 F+G+KS TS Sbjct: 351 FQGLKSLTS 359>NP_644807 Length = 548 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 FRGMKSET 8 FRG+KS T Sbjct: 132 FRGLKSLT 139>NP_003774 Length = 422 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 FRGMKSETS 9 FR KSET+ Sbjct: 67 FRSTKSETN 75>NP_004629 Length = 2157 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 RGMKSET 8 +GM+SET Sbjct: 819 KGMRSET 825>NP_542417 Length = 2157 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 RGMKSET 8 +GM+SET Sbjct: 819 KGMRSET 825>NP_003639 Length = 1170 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 FRGMKSET 8 FR ++SET Sbjct: 1001 FRALRSET 1008>NP_690618 Length = 1214 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 FRGMKSET 8 FR ++SET Sbjct: 1045 FRALRSET 1052>NP_001138899 Length = 591 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 FRGMKSETS 9 F+GMKS S Sbjct: 289 FKGMKSYIS 297>NP_001096045 Length = 624 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 FRGMKSETS 9 F+GMKS S Sbjct: 289 FKGMKSYIS 297>NP_443102 Length = 628 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 FRGMKSETS 9 F+GMKS S Sbjct: 289 FKGMKSYIS 297>XP_006726175 Length = 2086 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 RGMKSET 8 +GM+SET Sbjct: 819 KGMRSET 825>XP_006726174 Length = 2156 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 RGMKSET 8 +GM+SET Sbjct: 818 KGMRSET 824>XP_006726087 Length = 2086 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 RGMKSET 8 +GM+SET Sbjct: 819 KGMRSET 825>XP_006726086 Length = 2156 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 RGMKSET 8 +GM+SET Sbjct: 818 KGMRSET 824>XP_006725985 Length = 2156 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 RGMKSET 8 +GM+SET Sbjct: 818 KGMRSET 824>XP_006725897 Length = 2086 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 RGMKSET 8 +GM+SET Sbjct: 819 KGMRSET 825>XP_006725896 Length = 2156 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 RGMKSET 8 +GM+SET Sbjct: 818 KGMRSET 824>XP_006725787 Length = 2086 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 RGMKSET 8 +GM+SET Sbjct: 819 KGMRSET 825>XP_006725786 Length = 2156 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 RGMKSET 8 +GM+SET Sbjct: 818 KGMRSET 824>XP_006725571 Length = 2086 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 RGMKSET 8 +GM+SET Sbjct: 819 KGMRSET 825>XP_006725570 Length = 2156 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 RGMKSET 8 +GM+SET Sbjct: 818 KGMRSET 824>XP_006715254 Length = 2086 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 RGMKSET 8 +GM+SET Sbjct: 819 KGMRSET 825>XP_005246167 Length = 680 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 FRGMKSET 8 FR ++SET Sbjct: 511 FRALRSET 518>XP_005246165 Length = 1081 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 FRGMKSET 8 FR ++SET Sbjct: 912 FRALRSET 919>XP_005246164 Length = 1102 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 FRGMKSET 8 FR ++SET Sbjct: 933 FRALRSET 940>NP_005088 Length = 557 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 FRGMKS 6 FRG+KS Sbjct: 135 FRGLKS 140>NP_060606 Length = 3477 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 FRGMKS 6 FRGMK+ Sbjct: 2395 FRGMKT 2400>NP_000179 Length = 917 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 FRGMKSET 8 FRG SET Sbjct: 768 FRGQISET 775>NP_277033 Length = 921 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 FRGMKSET 8 FRG SET Sbjct: 772 FRGQISET 779>NP_277032 Length = 921 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 FRGMKSET 8 FRG SET Sbjct: 772 FRGQISET 779>NP_277035 Length = 905 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 FRGMKSET 8 FRG SET Sbjct: 756 FRGQISET 763>NP_277031 Length = 916 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 FRGMKSET 8 FRG SET Sbjct: 767 FRGQISET 774>NP_001245380 Length = 490 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 FRGMKSET 8 FRG SET Sbjct: 75 FRGEASET 82>NP_872629 Length = 480 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 FRGMKSET 8 FRG SET Sbjct: 84 FRGEASET 91>NP_001245379 Length = 430 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 FRGMKSET 8 FRG SET Sbjct: 15 FRGEASET 22>XP_006721039 Length = 499 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 FRGMKSET 8 FRG SET Sbjct: 84 FRGEASET 91>XP_005255732 Length = 508 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 FRGMKSET 8 FRG SET Sbjct: 93 FRGEASET 100>XP_005270329 Length = 291 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 FRGMKS 6 FRG+KS Sbjct: 135 FRGLKS 140>XP_005269794 Length = 889 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 FRGMKSET 8 FRG SET Sbjct: 740 FRGQISET 747>XP_005269793 Length = 921 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 FRGMKSET 8 FRG SET Sbjct: 772 FRGQISET 779>XP_005269792 Length = 960 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 FRGMKSET 8 FRG SET Sbjct: 811 FRGQISET 818>XP_005266846 Length = 135 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 FRGMKSE 7 +RGMK+E Sbjct: 8 WRGMKNE 14>XP_005266845 Length = 170 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 FRGMKSE 7 +RGMK+E Sbjct: 43 WRGMKNE 49>XP_005266844 Length = 179 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 FRGMKSE 7 +RGMK+E Sbjct: 52 WRGMKNE 58>NP_004194 Length = 499 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 FRGMKSET 8 FRG SET Sbjct: 84 FRGEASET 91Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.311 0.120 0.312 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 439,747 Number of extensions: 737 Number of successful extensions: 53 Number of sequences better than 10000.0: 53 Number of HSP's gapped: 53 Number of HSP's successfully gapped: 53 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.6 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |