Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_000537 20 509 NP_001263689 20 509 NP_001119584 20 509 NP_001119586 20 509 NP_001263625 20 509 NP_001119590 20 509 NP_001263690 20 509 NP_001119585 20 509 NP_001263624 20 509 NP_001119588 20 509 NP_001119587 20 509 NP_001119589 20 509 NP_055448 18 1135 NP_001263627 16 5631 NP_001263628 16 5631 NP_001263626 16 5631 NP_001108451 16 7355 NP_001108454 16 7355 NP_003713 16 7355 NP_001108450 16 7355 NP_001108452 16 7355 NP_001108453 16 7355 NP_001191121 16 7355 NP_001119713 16 7355 NP_001191117 16 7355 NP_001119712 16 7355 NP_001119714 16 7355 NP_005418 16 7355 NP_001191116 16 7355 NP_001191115 16 7355 NP_001191119 16 7355 NP_001191113 16 7355 NP_001191118 16 7355 NP_001191120 16 7355 NP_001191114 16 7355 NP_065759 16 7355 NP_001128243 16 7355 XP_005247903 16 7355 XP_005247901 16 7355 XP_005247900 16 7355 NP_003310 15 9605 NP_597676 15 9605 NP_001013758 15 9605 NP_001243779 15 9605 NP_596869 15 9605 XP_005246888 15 9605 XP_006712788 15 9605 XP_006712787 15 9605 XP_006712786 15 9605 NP_001254479 15 9605 NP_597681 15 9605>NP_000537 Length = 393 Score = 19.6 bits (39), Expect = 509 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 RAMAIYKQ 9 RAMAIYKQ Sbjct: 158 RAMAIYKQ 165>NP_001263689 Length = 354 Score = 19.6 bits (39), Expect = 509 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 RAMAIYKQ 9 RAMAIYKQ Sbjct: 119 RAMAIYKQ 126>NP_001119584 Length = 393 Score = 19.6 bits (39), Expect = 509 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 RAMAIYKQ 9 RAMAIYKQ Sbjct: 158 RAMAIYKQ 165>NP_001119586 Length = 341 Score = 19.6 bits (39), Expect = 509 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 RAMAIYKQ 9 RAMAIYKQ Sbjct: 158 RAMAIYKQ 165>NP_001263625 Length = 302 Score = 19.6 bits (39), Expect = 509 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 RAMAIYKQ 9 RAMAIYKQ Sbjct: 119 RAMAIYKQ 126>NP_001119590 Length = 354 Score = 19.6 bits (39), Expect = 509 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 RAMAIYKQ 9 RAMAIYKQ Sbjct: 119 RAMAIYKQ 126>NP_001263690 Length = 354 Score = 19.6 bits (39), Expect = 509 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 RAMAIYKQ 9 RAMAIYKQ Sbjct: 119 RAMAIYKQ 126>NP_001119585 Length = 346 Score = 19.6 bits (39), Expect = 509 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 RAMAIYKQ 9 RAMAIYKQ Sbjct: 158 RAMAIYKQ 165>NP_001263624 Length = 307 Score = 19.6 bits (39), Expect = 509 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 RAMAIYKQ 9 RAMAIYKQ Sbjct: 119 RAMAIYKQ 126>NP_001119588 Length = 209 Score = 19.6 bits (39), Expect = 509 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 RAMAIYKQ 9 RAMAIYKQ Sbjct: 26 RAMAIYKQ 33>NP_001119587 Length = 261 Score = 19.6 bits (39), Expect = 509 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 RAMAIYKQ 9 RAMAIYKQ Sbjct: 26 RAMAIYKQ 33>NP_001119589 Length = 214 Score = 19.6 bits (39), Expect = 509 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 RAMAIYKQ 9 RAMAIYKQ Sbjct: 26 RAMAIYKQ 33>NP_055448 Length = 1173 Score = 18.5 bits (36), Expect = 1135 Identities = 7/8 (87%), Positives = 8/8 (100%) Query: 2 RAMAIYKQ 9 RA+AIYKQ Sbjct: 631 RALAIYKQ 638>NP_001263627 Length = 182 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 MAIYKQ 9 MAIYKQ Sbjct: 1 MAIYKQ 6>NP_001263628 Length = 187 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 MAIYKQ 9 MAIYKQ Sbjct: 1 MAIYKQ 6>NP_001263626 Length = 234 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 MAIYKQ 9 MAIYKQ Sbjct: 1 MAIYKQ 6>NP_001108451 Length = 487 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 RAMAIYKQ 9 RAM +YK+ Sbjct: 226 RAMPVYKK 233>NP_001108454 Length = 393 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 RAMAIYKQ 9 RAM +YK+ Sbjct: 132 RAMPVYKK 139>NP_003713 Length = 680 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 RAMAIYKQ 9 RAM +YK+ Sbjct: 226 RAMPVYKK 233>NP_001108450 Length = 555 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 RAMAIYKQ 9 RAM +YK+ Sbjct: 226 RAMPVYKK 233>NP_001108452 Length = 586 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 RAMAIYKQ 9 RAM +YK+ Sbjct: 132 RAMPVYKK 139>NP_001108453 Length = 461 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 RAMAIYKQ 9 RAM +YK+ Sbjct: 132 RAMPVYKK 139>NP_001191121 Length = 565 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 RAMAIYKQ 9 RAM +YK+ Sbjct: 105 RAMPVYKK 112>NP_001119713 Length = 450 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 RAMAIYKQ 9 RAM +YK+ Sbjct: 127 RAMPVYKK 134>NP_001191117 Length = 540 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 RAMAIYKQ 9 RAM +YK+ Sbjct: 176 RAMPVYKK 183>NP_001119712 Length = 587 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 RAMAIYKQ 9 RAM +YK+ Sbjct: 127 RAMPVYKK 134>NP_001119714 Length = 426 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 RAMAIYKQ 9 RAM +YK+ Sbjct: 127 RAMPVYKK 134>NP_005418 Length = 636 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 RAMAIYKQ 9 RAM +YK+ Sbjct: 176 RAMPVYKK 183>NP_001191116 Length = 555 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 RAMAIYKQ 9 RAM +YK+ Sbjct: 176 RAMPVYKK 183>NP_001191115 Length = 403 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 RAMAIYKQ 9 RAM +YK+ Sbjct: 176 RAMPVYKK 183>NP_001191119 Length = 506 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 RAMAIYKQ 9 RAM +YK+ Sbjct: 127 RAMPVYKK 134>NP_001191113 Length = 499 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 RAMAIYKQ 9 RAM +YK+ Sbjct: 176 RAMPVYKK 183>NP_001191118 Length = 354 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 RAMAIYKQ 9 RAM +YK+ Sbjct: 127 RAMPVYKK 134>NP_001191120 Length = 491 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 RAMAIYKQ 9 RAM +YK+ Sbjct: 127 RAMPVYKK 134>NP_001191114 Length = 475 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 RAMAIYKQ 9 RAM +YK+ Sbjct: 176 RAMPVYKK 183>NP_065759 Length = 1116 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 FRAMAIYK 8 F AMAI+K Sbjct: 208 FPAMAIFK 215>NP_001128243 Length = 1139 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 FRAMAIYK 8 F AMAI+K Sbjct: 231 FPAMAIFK 238>XP_005247903 Length = 483 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 RAMAIYKQ 9 RAM +YK+ Sbjct: 226 RAMPVYKK 233>XP_005247901 Length = 663 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 RAMAIYKQ 9 RAM +YK+ Sbjct: 209 RAMPVYKK 216>XP_005247900 Length = 676 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 RAMAIYKQ 9 RAM +YK+ Sbjct: 226 RAMPVYKK 233>NP_003310 Length = 26926 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 FRAMAI 6 FRAMAI Sbjct: 9179 FRAMAI 9184>NP_597676 Length = 27051 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 FRAMAI 6 FRAMAI Sbjct: 9304 FRAMAI 9309>NP_001013758 Length = 1035 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 RAMAIYK 8 RAM +YK Sbjct: 1017 RAMQVYK 1023>NP_001243779 Length = 34350 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 FRAMAI 6 FRAMAI Sbjct: 16603 FRAMAI 16608>NP_596869 Length = 33423 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 FRAMAI 6 FRAMAI Sbjct: 15676 FRAMAI 15681>XP_005246888 Length = 22663 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 FRAMAI 6 FRAMAI Sbjct: 4916 FRAMAI 4921>XP_006712788 Length = 24022 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 FRAMAI 6 FRAMAI Sbjct: 6275 FRAMAI 6280>XP_006712787 Length = 33978 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 FRAMAI 6 FRAMAI Sbjct: 16231 FRAMAI 16236>XP_006712786 Length = 35484 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 FRAMAI 6 FRAMAI Sbjct: 17737 FRAMAI 17742>NP_001254479 Length = 35991 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 FRAMAI 6 FRAMAI Sbjct: 18244 FRAMAI 18249>NP_597681 Length = 27118 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 FRAMAI 6 FRAMAI Sbjct: 9371 FRAMAI 9376Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.345 0.140 0.397 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 320,103 Number of extensions: 378 Number of successful extensions: 51 Number of sequences better than 10000.0: 51 Number of HSP's gapped: 51 Number of HSP's successfully gapped: 51 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.5 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.8 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |