Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_001245210 20 390 NP_000242 20 390 XP_005264389 20 390 NP_061883 17 2528 XP_005277849 17 2528 XP_005257521 17 2528 NP_000375 17 3301 NP_002068 17 4312 XP_006717126 17 4312 XP_005251986 17 4312 XP_006717125 17 4312 NP_001367 16 5631 NP_056076 16 5631 NP_001242997 16 7355 NP_001188254 16 7355 NP_002605 16 7355 NP_001242996 16 7355 NP_006638 16 7355 XP_006722001 16 7355 XP_006722000 16 7355 XP_006721999 16 7355 XP_006721998 16 7355 XP_006721997 16 7355 XP_006721996 16 7355 XP_006721995 16 7355 XP_005273027 16 7355 XP_005273026 16 7355 XP_005273025 16 7355 NP_057423 16 7355 NP_940857 16 7355 NP_002462 15 9605 NP_000248 15 9605 NP_001009899 15 9605 NP_683692 15 9605 XP_005267753 15 9605 XP_006720215 15 9605 XP_006720214 15 9605 XP_005267751 15 9605 XP_005248208 15 9605 XP_005248207 15 9605 XP_006714021 15 9605 XP_005247266 15 9605 XP_005247265 15 9605 NP_690862 15 9605>NP_001245210 Length = 868 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 FQRQTANLQ 9 FQRQ ANLQ Sbjct: 328 FQRQAANLQ 336>NP_000242 Length = 934 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 FQRQTANLQ 9 FQRQ ANLQ Sbjct: 394 FQRQAANLQ 402>XP_005264389 Length = 921 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 FQRQTANLQ 9 FQRQ ANLQ Sbjct: 394 FQRQAANLQ 402>NP_061883 Length = 424 Score = 17.3 bits (33), Expect = 2528 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 FQRQTANLQ 9 F+RQTA LQ Sbjct: 261 FERQTAVLQ 269>XP_005277849 Length = 326 Score = 17.3 bits (33), Expect = 2528 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 FQRQTANLQ 9 F+RQTA LQ Sbjct: 261 FERQTAVLQ 269>XP_005257521 Length = 326 Score = 17.3 bits (33), Expect = 2528 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 FQRQTANLQ 9 F+RQTA LQ Sbjct: 261 FERQTAVLQ 269>NP_000375 Length = 4563 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 FQRQTANLQ 9 F +QT NLQ Sbjct: 1779 FYKQTVNLQ 1787>NP_002068 Length = 767 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 FQRQTANL 8 FQ+Q ANL Sbjct: 496 FQQQAANL 503>XP_006717126 Length = 767 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 FQRQTANL 8 FQ+Q ANL Sbjct: 496 FQQQAANL 503>XP_005251986 Length = 767 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 FQRQTANL 8 FQ+Q ANL Sbjct: 496 FQQQAANL 503>XP_006717125 Length = 767 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 FQRQTANL 8 FQ+Q ANL Sbjct: 496 FQQQAANL 503>NP_001367 Length = 4646 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 QRQTANLQ 9 Q+Q ANLQ Sbjct: 1233 QQQVANLQ 1240>NP_056076 Length = 1498 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 FQRQTAN 7 +QRQT+N Sbjct: 512 YQRQTSN 518>NP_001242997 Length = 427 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 FQRQTANLQ 9 FQR AN Q Sbjct: 76 FQRGVANFQ 84>NP_001188254 Length = 519 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 FQRQTANLQ 9 F+R+TA+L+ Sbjct: 227 FKRETASLK 235>NP_002605 Length = 519 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 FQRQTANLQ 9 F+R+TA+L+ Sbjct: 227 FKRETASLK 235>NP_001242996 Length = 476 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 FQRQTANLQ 9 FQR AN Q Sbjct: 76 FQRGVANFQ 84>NP_006638 Length = 483 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 FQRQTANLQ 9 FQR AN Q Sbjct: 76 FQRGVANFQ 84>XP_006722001 Length = 392 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 QRQTANLQ 9 +R+TANL+ Sbjct: 189 RRETANLE 196>XP_006722000 Length = 456 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 QRQTANLQ 9 +R+TANL+ Sbjct: 253 RRETANLE 260>XP_006721999 Length = 493 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 QRQTANLQ 9 +R+TANL+ Sbjct: 290 RRETANLE 297>XP_006721998 Length = 493 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 QRQTANLQ 9 +R+TANL+ Sbjct: 290 RRETANLE 297>XP_006721997 Length = 493 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 QRQTANLQ 9 +R+TANL+ Sbjct: 290 RRETANLE 297>XP_006721996 Length = 511 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 QRQTANLQ 9 +R+TANL+ Sbjct: 308 RRETANLE 315>XP_006721995 Length = 662 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 QRQTANLQ 9 +R+TANL+ Sbjct: 459 RRETANLE 466>XP_005273027 Length = 394 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 FQRQTANLQ 9 F+R+TA+L+ Sbjct: 227 FKRETASLK 235>XP_005273026 Length = 508 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 FQRQTANLQ 9 F+R+TA+L+ Sbjct: 227 FKRETASLK 235>XP_005273025 Length = 508 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 FQRQTANLQ 9 F+R+TA+L+ Sbjct: 227 FKRETASLK 235>NP_057423 Length = 456 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 QRQTANLQ 9 +R+TANL+ Sbjct: 253 RRETANLE 260>NP_940857 Length = 5147 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 QRQTANLQ 9 QRQ NLQ Sbjct: 4806 QRQECNLQ 4813>NP_002462 Length = 1939 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 FQRQTANLQ 9 F+R+ NLQ Sbjct: 1500 FKRENKNLQ 1508>NP_000248 Length = 1935 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 FQRQTANLQ 9 F+R+ NLQ Sbjct: 1498 FKRENKNLQ 1506>NP_001009899 Length = 2245 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 QRQTANL 8 Q+QTAN+ Sbjct: 177 QKQTANV 183>NP_683692 Length = 3051 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 RQTANLQ 9 ++TANLQ Sbjct: 2921 KETANLQ 2927>XP_005267753 Length = 1935 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 FQRQTANLQ 9 F+R+ NLQ Sbjct: 1498 FKRENKNLQ 1506>XP_006720215 Length = 1968 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 FQRQTANLQ 9 F+R+ NLQ Sbjct: 1529 FKRENKNLQ 1537>XP_006720214 Length = 1978 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 FQRQTANLQ 9 F+R+ NLQ Sbjct: 1539 FKRENKNLQ 1547>XP_005267751 Length = 1979 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 FQRQTANLQ 9 F+R+ NLQ Sbjct: 1540 FKRENKNLQ 1548>XP_005248208 Length = 3097 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 RQTANLQ 9 ++TANLQ Sbjct: 2920 KETANLQ 2926>XP_005248207 Length = 3098 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 RQTANLQ 9 ++TANLQ Sbjct: 2921 KETANLQ 2927>XP_006714021 Length = 3112 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 RQTANLQ 9 ++TANLQ Sbjct: 2935 KETANLQ 2941>XP_005247266 Length = 2189 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 QRQTANL 8 Q+QTAN+ Sbjct: 121 QKQTANV 127>XP_005247265 Length = 2211 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 QRQTANL 8 Q+QTAN+ Sbjct: 143 QKQTANV 149>NP_690862 Length = 166 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 QRQTANLQ 9 QRQ AN++ Sbjct: 102 QRQAANIR 109Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.325 0.124 0.328 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 369,415 Number of extensions: 426 Number of successful extensions: 44 Number of sequences better than 10000.0: 44 Number of HSP's gapped: 44 Number of HSP's successfully gapped: 44 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.0 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.1 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |