Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_443179 18 1482 XP_005266703 18 1482 NP_003271 16 5631 NP_001714 16 7355 XP_005249383 16 7355 NP_003310 15 9605 NP_597676 15 9605 NP_001243779 15 9605 NP_596869 15 9605 NP_001073276 15 9605 NP_001073275 15 9605 NP_055039 15 9605 NP_036434 15 9605 XP_005276461 15 9605 XP_006722424 15 9605 XP_005258217 15 9605 XP_005246888 15 9605 XP_006712788 15 9605 XP_006712787 15 9605 XP_006712786 15 9605 XP_005270731 15 9605 XP_005270730 15 9605 XP_006710560 15 9605 XP_006710559 15 9605 XP_006710558 15 9605 XP_006710557 15 9605 XP_006710556 15 9605 XP_006710555 15 9605 XP_005270727 15 9605 XP_006710554 15 9605 XP_005270725 15 9605 XP_005270724 15 9605 XP_006710553 15 9605 XP_005270723 15 9605 XP_006710552 15 9605 XP_006710551 15 9605 XP_006710550 15 9605 XP_006710549 15 9605 XP_006710548 15 9605 NP_001254479 15 9605 NP_597681 15 9605>NP_443179 Length = 2170 Score = 18.1 bits (35), Expect = 1482 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 1 FQATRET 7 FQATRET Sbjct: 999 FQATRET 1005>XP_005266703 Length = 1501 Score = 18.1 bits (35), Expect = 1482 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 1 FQATRET 7 FQATRET Sbjct: 330 FQATRET 336>NP_003271 Length = 161 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 QATRETVT 9 QAT ET+T Sbjct: 122 QATGETIT 129>NP_001714 Length = 2649 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 FQATRETVT 9 FQ R TVT Sbjct: 2089 FQGLRHTVT 2097>XP_005249383 Length = 3186 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 FQATRETVT 9 FQ R TVT Sbjct: 2626 FQGLRHTVT 2634>NP_003310 Length = 26926 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 TRETVT 9 TRET+T Sbjct: 21370 TRETIT 21375>NP_597676 Length = 27051 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 TRETVT 9 TRET+T Sbjct: 21495 TRETIT 21500>NP_001243779 Length = 34350 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 TRETVT 9 TRET+T Sbjct: 28794 TRETIT 28799>NP_596869 Length = 33423 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 TRETVT 9 TRET+T Sbjct: 27867 TRETIT 27872>NP_001073276 Length = 388 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 FQATRETVT 9 +Q+T ETV+ Sbjct: 126 YQSTSETVS 134>NP_001073275 Length = 388 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 FQATRETVT 9 +Q+T ETV+ Sbjct: 126 YQSTSETVS 134>NP_055039 Length = 388 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 FQATRETVT 9 +Q+T ETV+ Sbjct: 126 YQSTSETVS 134>NP_036434 Length = 1403 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 FQATRETV 8 F+AT ETV Sbjct: 298 FEATWETV 305>XP_005276461 Length = 388 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 FQATRETVT 9 +Q+T ETV+ Sbjct: 126 YQSTSETVS 134>XP_006722424 Length = 504 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 FQATRETVT 9 ++ATR TVT Sbjct: 461 WEATRLTVT 469>XP_005258217 Length = 504 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 FQATRETVT 9 ++ATR TVT Sbjct: 461 WEATRLTVT 469>XP_005246888 Length = 22663 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 TRETVT 9 TRET+T Sbjct: 17107 TRETIT 17112>XP_006712788 Length = 24022 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 TRETVT 9 TRET+T Sbjct: 18466 TRETIT 18471>XP_006712787 Length = 33978 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 TRETVT 9 TRET+T Sbjct: 28422 TRETIT 28427>XP_006712786 Length = 35484 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 TRETVT 9 TRET+T Sbjct: 29928 TRETIT 29933>XP_005270731 Length = 1177 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 FQATRETV 8 F+AT ETV Sbjct: 298 FEATWETV 305>XP_005270730 Length = 1177 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 FQATRETV 8 F+AT ETV Sbjct: 298 FEATWETV 305>XP_006710560 Length = 1181 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 FQATRETV 8 F+AT ETV Sbjct: 303 FEATWETV 310>XP_006710559 Length = 1188 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 FQATRETV 8 F+AT ETV Sbjct: 303 FEATWETV 310>XP_006710558 Length = 1191 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 FQATRETV 8 F+AT ETV Sbjct: 303 FEATWETV 310>XP_006710557 Length = 1191 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 FQATRETV 8 F+AT ETV Sbjct: 303 FEATWETV 310>XP_006710556 Length = 1195 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 FQATRETV 8 F+AT ETV Sbjct: 303 FEATWETV 310>XP_006710555 Length = 1403 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 FQATRETV 8 F+AT ETV Sbjct: 298 FEATWETV 305>XP_005270727 Length = 1403 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 FQATRETV 8 F+AT ETV Sbjct: 298 FEATWETV 305>XP_006710554 Length = 1421 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 FQATRETV 8 F+AT ETV Sbjct: 303 FEATWETV 310>XP_005270725 Length = 1446 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 FQATRETV 8 F+AT ETV Sbjct: 298 FEATWETV 305>XP_005270724 Length = 1446 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 FQATRETV 8 F+AT ETV Sbjct: 298 FEATWETV 305>XP_006710553 Length = 1451 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 FQATRETV 8 F+AT ETV Sbjct: 303 FEATWETV 310>XP_005270723 Length = 1459 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 FQATRETV 8 F+AT ETV Sbjct: 298 FEATWETV 305>XP_006710552 Length = 1464 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 FQATRETV 8 F+AT ETV Sbjct: 303 FEATWETV 310>XP_006710551 Length = 1464 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 FQATRETV 8 F+AT ETV Sbjct: 303 FEATWETV 310>XP_006710550 Length = 1464 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 FQATRETV 8 F+AT ETV Sbjct: 303 FEATWETV 310>XP_006710549 Length = 1464 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 FQATRETV 8 F+AT ETV Sbjct: 303 FEATWETV 310>XP_006710548 Length = 1464 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 FQATRETV 8 F+AT ETV Sbjct: 303 FEATWETV 310>NP_001254479 Length = 35991 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 TRETVT 9 TRET+T Sbjct: 30435 TRETIT 30440>NP_597681 Length = 27118 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 TRETVT 9 TRET+T Sbjct: 21562 TRETIT 21567Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.318 0.118 0.301 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 316,167 Number of extensions: 514 Number of successful extensions: 41 Number of sequences better than 10000.0: 41 Number of HSP's gapped: 41 Number of HSP's successfully gapped: 41 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.9 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |