Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_004351 21 229 NP_078858 18 1482 NP_001278232 18 1482 NP_001278214 18 1482 NP_005236 17 2528 XP_006714202 17 2528 XP_005262892 17 2528 XP_005262891 17 2528 NP_443132 17 3301 NP_937757 17 3301 NP_937756 17 3301 NP_000205 17 4312 NP_005520 17 4312 XP_006710661 17 4312 XP_005245920 17 4312 XP_006710660 17 4312 XP_006710659 17 4312 XP_006710658 17 4312 XP_006710657 17 4312 NP_694545 16 5631 XP_005255894 16 5631 XP_006721232 16 5631 XP_005255893 16 5631 NP_722579 16 5631 NP_001074295 16 7355 NP_064593 16 7355 NP_001399 16 7355 XP_005272427 16 7355 XP_005272426 16 7355 XP_006710468 16 7355 XP_005270637 16 7355 NP_071800 16 7355 NP_001001563 16 7355 NP_000375 15 9605 NP_689777 15 9605 NP_060360 15 9605 NP_055782 15 9605 NP_001438 15 9605 XP_006725604 15 9605 XP_006725603 15 9605 XP_006725602 15 9605 XP_006725601 15 9605 XP_006725600 15 9605 XP_005254293 15 9605 XP_005254289 15 9605 XP_005254292 15 9605 XP_005254291 15 9605 XP_005254290 15 9605 XP_005250858 15 9605 XP_005250857 15 9605 XP_006714824 15 9605 NP_660156 15 9605 NP_061822 15 9605>NP_004351 Length = 882 Score = 20.8 bits (42), Expect = 229 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 FPAYTLVVQ 9 FP YTLVVQ Sbjct: 338 FPTYTLVVQ 346>NP_078858 Length = 4981 Score = 18.1 bits (35), Expect = 1482 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 PAYTLVVQ 9 PAY+LV+Q Sbjct: 1279 PAYSLVIQ 1286>NP_001278232 Length = 4983 Score = 18.1 bits (35), Expect = 1482 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 PAYTLVVQ 9 PAY+LV+Q Sbjct: 1279 PAYSLVIQ 1286>NP_001278214 Length = 4982 Score = 18.1 bits (35), Expect = 1482 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 PAYTLVVQ 9 PAY+LV+Q Sbjct: 1279 PAYSLVIQ 1286>NP_005236 Length = 4588 Score = 17.3 bits (33), Expect = 2528 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 PAYTLVVQ 9 P YTL++Q Sbjct: 1731 PIYTLIIQ 1738>XP_006714202 Length = 4588 Score = 17.3 bits (33), Expect = 2528 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 PAYTLVVQ 9 P YTL++Q Sbjct: 1731 PIYTLIIQ 1738>XP_005262892 Length = 4600 Score = 17.3 bits (33), Expect = 2528 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 PAYTLVVQ 9 P YTL++Q Sbjct: 1731 PIYTLIIQ 1738>XP_005262891 Length = 4600 Score = 17.3 bits (33), Expect = 2528 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 PAYTLVVQ 9 P YTL++Q Sbjct: 1731 PIYTLIIQ 1738>NP_443132 Length = 3538 Score = 16.9 bits (32), Expect = 3301 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 FPAYTLV 7 FP YTL+ Sbjct: 2147 FPGYTLI 2153>NP_937757 Length = 3667 Score = 16.9 bits (32), Expect = 3301 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 FPAYTLV 7 FP YTL+ Sbjct: 2211 FPGYTLI 2217>NP_937756 Length = 3707 Score = 16.9 bits (32), Expect = 3301 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 FPAYTLV 7 FP YTL+ Sbjct: 2251 FPGYTLI 2257>NP_000205 Length = 1218 Score = 16.5 bits (31), Expect = 4312 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 PAYTLV 7 PAYTLV Sbjct: 1174 PAYTLV 1179>NP_005520 Length = 4391 Score = 16.5 bits (31), Expect = 4312 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 PAYTLV 7 PAYTLV Sbjct: 1800 PAYTLV 1805>XP_006710661 Length = 4057 Score = 16.5 bits (31), Expect = 4312 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 PAYTLV 7 PAYTLV Sbjct: 1983 PAYTLV 1988>XP_005245920 Length = 4392 Score = 16.5 bits (31), Expect = 4312 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 PAYTLV 7 PAYTLV Sbjct: 1801 PAYTLV 1806>XP_006710660 Length = 4397 Score = 16.5 bits (31), Expect = 4312 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 PAYTLV 7 PAYTLV Sbjct: 1800 PAYTLV 1805>XP_006710659 Length = 4556 Score = 16.5 bits (31), Expect = 4312 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 PAYTLV 7 PAYTLV Sbjct: 1959 PAYTLV 1964>XP_006710658 Length = 4563 Score = 16.5 bits (31), Expect = 4312 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 PAYTLV 7 PAYTLV Sbjct: 1966 PAYTLV 1971>XP_006710657 Length = 4579 Score = 16.5 bits (31), Expect = 4312 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 PAYTLV 7 PAYTLV Sbjct: 1982 PAYTLV 1987>NP_694545 Length = 514 Score = 16.2 bits (30), Expect = 5631 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 PAYTLVVQ 9 P YTL+++ Sbjct: 118 PTYTLIIR 125>XP_005255894 Length = 451 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 FPAYTLVVQ 9 FP Y L +Q Sbjct: 61 FPGYNLTLQ 69>XP_006721232 Length = 528 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 FPAYTLVVQ 9 FP Y L +Q Sbjct: 61 FPGYNLTLQ 69>XP_005255893 Length = 528 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 FPAYTLVVQ 9 FP Y L +Q Sbjct: 61 FPGYNLTLQ 69>NP_722579 Length = 528 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 FPAYTLVVQ 9 FP Y L +Q Sbjct: 61 FPGYNLTLQ 69>NP_001074295 Length = 1406 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 PAYTLV 7 PAYT+V Sbjct: 157 PAYTMV 162>NP_064593 Length = 592 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 FPAYTLVV 8 +PAY L V Sbjct: 551 YPAYALAV 558>NP_001399 Length = 2923 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 PAYTLVVQ 9 P Y LV+Q Sbjct: 990 PEYVLVIQ 997>XP_005272427 Length = 1406 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 PAYTLV 7 PAYT+V Sbjct: 157 PAYTMV 162>XP_005272426 Length = 1406 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 PAYTLV 7 PAYT+V Sbjct: 157 PAYTMV 162>XP_006710468 Length = 2916 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 PAYTLVVQ 9 P Y LV+Q Sbjct: 990 PEYVLVIQ 997>XP_005270637 Length = 2921 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 PAYTLVVQ 9 P Y LV+Q Sbjct: 990 PEYVLVIQ 997>NP_071800 Length = 555 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 FPAYTLVV 8 +PAY L V Sbjct: 514 YPAYALAV 521>NP_001001563 Length = 456 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 PAYTLVVQ 9 P YTLV++ Sbjct: 249 PPYTLVLE 256>NP_000375 Length = 4563 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 2 PAYTLVV 8 P+YTL++ Sbjct: 3293 PSYTLIL 3299>NP_689777 Length = 3997 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 PAYTLVVQ 9 P Y++V+Q Sbjct: 2780 PEYSIVIQ 2787>NP_060360 Length = 4022 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 PAYTLVVQ 9 P Y++V+Q Sbjct: 2805 PEYSIVIQ 2812>NP_055782 Length = 1017 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 1 FPAYTL 6 FP+YT+ Sbjct: 584 FPSYTI 589>NP_001438 Length = 4349 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 3 AYTLVVQ 9 +YTL++Q Sbjct: 114 SYTLIIQ 120>XP_006725604 Length = 904 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 1 FPAYTL 6 FP+YT+ Sbjct: 584 FPSYTI 589>XP_006725603 Length = 1017 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 1 FPAYTL 6 FP+YT+ Sbjct: 584 FPSYTI 589>XP_006725602 Length = 1017 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 1 FPAYTL 6 FP+YT+ Sbjct: 584 FPSYTI 589>XP_006725601 Length = 1017 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 1 FPAYTL 6 FP+YT+ Sbjct: 584 FPSYTI 589>XP_006725600 Length = 1017 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 1 FPAYTL 6 FP+YT+ Sbjct: 584 FPSYTI 589>XP_005254293 Length = 904 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 1 FPAYTL 6 FP+YT+ Sbjct: 584 FPSYTI 589>XP_005254289 Length = 1017 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 1 FPAYTL 6 FP+YT+ Sbjct: 584 FPSYTI 589>XP_005254292 Length = 1017 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 1 FPAYTL 6 FP+YT+ Sbjct: 584 FPSYTI 589>XP_005254291 Length = 1017 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 1 FPAYTL 6 FP+YT+ Sbjct: 584 FPSYTI 589>XP_005254290 Length = 1017 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 1 FPAYTL 6 FP+YT+ Sbjct: 584 FPSYTI 589>XP_005250858 Length = 4022 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 PAYTLVVQ 9 P Y++V+Q Sbjct: 2805 PEYSIVIQ 2812>XP_005250857 Length = 4022 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 PAYTLVVQ 9 P Y++V+Q Sbjct: 2805 PEYSIVIQ 2812>XP_006714824 Length = 4349 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 3 AYTLVVQ 9 +YTL++Q Sbjct: 114 SYTLIIQ 120>NP_660156 Length = 198 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 PAYTLVVQ 9 P Y L+VQ Sbjct: 99 PIYKLIVQ 106>NP_061822 Length = 389 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 AYTLVV 8 AYTLVV Sbjct: 70 AYTLVV 75Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.333 0.143 0.436 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 461,745 Number of extensions: 735 Number of successful extensions: 53 Number of sequences better than 10000.0: 53 Number of HSP's gapped: 53 Number of HSP's successfully gapped: 53 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.3 bits) S2: 28 (15.4 bits)
|
CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |