Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_001167558 22 134 NP_858045 22 134 NP_006525 22 134 NP_001167559 22 134 NP_071347 17 3301 NP_037396 17 3301 XP_006713348 17 3301 NP_001153682 17 4312 NP_055066 17 4312 NP_003696 17 4312 NP_542376 17 4312 NP_004361 17 4312 XP_006715896 17 4312 XP_006715895 17 4312 XP_006715894 17 4312 XP_006715893 17 4312 XP_006715397 17 4312 XP_005246980 17 4312 NP_003296 16 5631 NP_001124170 16 5631 NP_077017 16 5631 NP_001175 16 7355 NP_036441 16 7355 NP_573573 16 7355 NP_068817 16 7355 NP_001239160 16 7355 XP_005277989 16 7355 XP_006718541 16 7355 XP_006718540 16 7355 XP_005277987 16 7355 XP_005271911 16 7355 NP_002309 15 9605 NP_065188 15 9605 NP_001027566 15 9605 NP_001027567 15 9605 NP_940971 15 9605 NP_849189 15 9605 NP_002541 15 9605 NP_542388 15 9605 NP_002542 15 9605 NP_055950 15 9605 NP_001273028 15 9605 NP_057422 15 9605 NP_055797 15 9605 NP_005272 15 9605 NP_005275 15 9605 XP_005267486 15 9605 XP_006720145 15 9605 XP_005267485 15 9605 XP_005267483 15 9605 XP_005267482 15 9605 XP_005267481 15 9605 XP_005267480 15 9605 XP_005267479 15 9605 XP_005267478 15 9605 XP_005267477 15 9605 XP_005269574 15 9605 XP_006717681 15 9605 XP_005250292 15 9605 XP_005267118 15 9605 XP_006715581 15 9605 XP_006715580 15 9605 XP_006715579 15 9605 NP_001128251 15 9605>NP_001167558 Length = 1423 Score = 21.6 bits (44), Expect = 134 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 FNSMINQMN 9 FNSM+NQMN Sbjct: 1135 FNSMMNQMN 1143>NP_858045 Length = 1424 Score = 21.6 bits (44), Expect = 134 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 FNSMINQMN 9 FNSM+NQMN Sbjct: 1135 FNSMMNQMN 1143>NP_006525 Length = 1420 Score = 21.6 bits (44), Expect = 134 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 FNSMINQMN 9 FNSM+NQMN Sbjct: 1135 FNSMMNQMN 1143>NP_001167559 Length = 1415 Score = 21.6 bits (44), Expect = 134 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 FNSMINQMN 9 FNSM+NQMN Sbjct: 1130 FNSMMNQMN 1138>NP_071347 Length = 1314 Score = 16.9 bits (32), Expect = 3301 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 NSMINQMN 9 NS++NQ+N Sbjct: 1031 NSVLNQLN 1038>NP_037396 Length = 483 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 FNSMINQMN 9 FNS I Q+N Sbjct: 463 FNSSIKQLN 471>XP_006713348 Length = 1314 Score = 16.9 bits (32), Expect = 3301 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 NSMINQMN 9 NS++NQ+N Sbjct: 1031 NSVLNQLN 1038>NP_001153682 Length = 676 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 FNSMINQM 8 FNS++N M Sbjct: 223 FNSLLNNM 230>NP_055066 Length = 675 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 FNSMINQM 8 FNS++N M Sbjct: 223 FNSLLNNM 230>NP_003696 Length = 678 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 FNSMINQM 8 FNS++N M Sbjct: 222 FNSLLNNM 229>NP_542376 Length = 1899 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 FNSMINQM 8 FN M+NQ+ Sbjct: 1759 FNQMLNQI 1766>NP_004361 Length = 3063 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 FNSMINQM 8 FN M+NQ+ Sbjct: 2923 FNQMLNQI 2930>XP_006715896 Length = 457 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 FNSMINQM 8 FNS++N M Sbjct: 234 FNSLLNNM 241>XP_006715895 Length = 568 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 FNSMINQM 8 FNS++N M Sbjct: 115 FNSLLNNM 122>XP_006715894 Length = 686 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 FNSMINQM 8 FNS++N M Sbjct: 234 FNSLLNNM 241>XP_006715893 Length = 687 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 FNSMINQM 8 FNS++N M Sbjct: 234 FNSLLNNM 241>XP_006715397 Length = 2972 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 FNSMINQM 8 FN M+NQ+ Sbjct: 2832 FNQMLNQI 2839>XP_005246980 Length = 661 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 FNSMINQM 8 FNS++N M Sbjct: 205 FNSLLNNM 212>NP_003296 Length = 848 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 FNSMINQ 7 FNS++NQ Sbjct: 765 FNSILNQ 771>NP_001124170 Length = 921 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 FNSMINQ 7 FNS++NQ Sbjct: 838 FNSILNQ 844>NP_077017 Length = 83 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 NSMINQMN 9 NSM++Q+N Sbjct: 32 NSMLDQIN 39>NP_001175 Length = 2644 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 FNSMINQ 7 FNS+IN+ Sbjct: 2341 FNSLINK 2347>NP_036441 Length = 1849 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 NSMINQMN 9 NS++ QMN Sbjct: 1628 NSILQQMN 1635>NP_573573 Length = 1261 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 NSMINQMN 9 NS++ QMN Sbjct: 1040 NSILQQMN 1047>NP_068817 Length = 1093 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 FNSMINQ 7 FNS +NQ Sbjct: 239 FNSAVNQ 245>NP_001239160 Length = 613 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 FNSMINQ 7 FNS +NQ Sbjct: 239 FNSAVNQ 245>XP_005277989 Length = 1470 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 NSMINQMN 9 NS++ QMN Sbjct: 1249 NSILQQMN 1256>XP_006718541 Length = 1839 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 NSMINQMN 9 NS++ QMN Sbjct: 1618 NSILQQMN 1625>XP_006718540 Length = 1842 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 NSMINQMN 9 NS++ QMN Sbjct: 1621 NSILQQMN 1628>XP_005277987 Length = 1849 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 NSMINQMN 9 NS++ QMN Sbjct: 1628 NSILQQMN 1635>XP_005271911 Length = 613 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 FNSMINQ 7 FNS +NQ Sbjct: 239 FNSAVNQ 245>NP_002309 Length = 774 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 NSMINQM 8 NS+INQ+ Sbjct: 170 NSLINQI 176>NP_065188 Length = 1221 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 FNSMINQMN 9 FNS N+M+ Sbjct: 120 FNSSANEMH 128>NP_001027566 Length = 1193 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 FNSMINQMN 9 FNS N+M+ Sbjct: 120 FNSSANEMH 128>NP_001027567 Length = 1222 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 FNSMINQMN 9 FNS N+M+ Sbjct: 120 FNSSANEMH 128>NP_940971 Length = 1250 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 FNSMINQMN 9 FNS N+M+ Sbjct: 120 FNSSANEMH 128>NP_849189 Length = 322 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 7/9 (77%) Query: 1 FNSMINQMN 9 FN+++N N Sbjct: 126 FNALVNYTN 134>NP_002541 Length = 315 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 FNSMINQM 8 FN++IN M Sbjct: 280 FNTVINPM 287>NP_542388 Length = 361 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 NSMINQMN 9 NS+IN+ N Sbjct: 221 NSVINRFN 228>NP_002542 Length = 321 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 FNSMINQM 8 FN++IN M Sbjct: 286 FNTVINPM 293>NP_055950 Length = 2012 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 SMINQMN 9 SM+NQM+ Sbjct: 1108 SMLNQMS 1114>NP_001273028 Length = 377 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 FNSMIN 6 +NSMIN Sbjct: 335 YNSMIN 340>NP_057422 Length = 975 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 FNSMINQM 8 F+S++N+M Sbjct: 806 FSSLLNEM 813>NP_055797 Length = 2341 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 SMINQM 8 SM+NQM Sbjct: 2170 SMVNQM 2175>NP_005272 Length = 330 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 FNSMIN 6 +NSMIN Sbjct: 288 YNSMIN 293>NP_005275 Length = 362 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 FNSMIN 6 +NSMIN Sbjct: 320 YNSMIN 325>XP_005267486 Length = 1421 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 SMINQM 8 SM+NQM Sbjct: 1250 SMVNQM 1255>XP_006720145 Length = 1423 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 SMINQM 8 SM+NQM Sbjct: 1252 SMVNQM 1257>XP_005267485 Length = 1459 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 SMINQM 8 SM+NQM Sbjct: 1288 SMVNQM 1293>XP_005267483 Length = 2230 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 SMINQM 8 SM+NQM Sbjct: 2059 SMVNQM 2064>XP_005267482 Length = 2243 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 SMINQM 8 SM+NQM Sbjct: 2072 SMVNQM 2077>XP_005267481 Length = 2293 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 SMINQM 8 SM+NQM Sbjct: 2122 SMVNQM 2127>XP_005267480 Length = 2336 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 SMINQM 8 SM+NQM Sbjct: 2165 SMVNQM 2170>XP_005267479 Length = 2344 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 SMINQM 8 SM+NQM Sbjct: 2173 SMVNQM 2178>XP_005267478 Length = 2348 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 SMINQM 8 SM+NQM Sbjct: 2177 SMVNQM 2182>XP_005267477 Length = 2349 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 SMINQM 8 SM+NQM Sbjct: 2178 SMVNQM 2183>XP_005269574 Length = 334 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 7/9 (77%) Query: 1 FNSMINQMN 9 FN+++N N Sbjct: 138 FNALVNYTN 146>XP_006717681 Length = 340 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 7/9 (77%) Query: 1 FNSMINQMN 9 FN+++N N Sbjct: 144 FNALVNYTN 152>XP_005250292 Length = 1654 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 SMINQMN 9 SM+NQM+ Sbjct: 750 SMLNQMS 756>XP_005267118 Length = 1222 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 FNSMINQMN 9 FNS N+M+ Sbjct: 121 FNSSANEMH 129>XP_006715581 Length = 1223 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 FNSMINQMN 9 FNS N+M+ Sbjct: 121 FNSSANEMH 129>XP_006715580 Length = 1249 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 FNSMINQMN 9 FNS N+M+ Sbjct: 119 FNSSANEMH 127>XP_006715579 Length = 1251 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 FNSMINQMN 9 FNS N+M+ Sbjct: 121 FNSSANEMH 129>NP_001128251 Length = 1015 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 FNSMINQM 8 F+S++N+M Sbjct: 846 FSSLLNEM 853Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.324 0.124 0.338 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 310,203 Number of extensions: 533 Number of successful extensions: 64 Number of sequences better than 10000.0: 64 Number of HSP's gapped: 64 Number of HSP's successfully gapped: 64 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.0 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.1 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |