Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_000236 18 1135 NP_001120972 18 1135 XP_006716054 18 1135 XP_006716053 18 1135 XP_006716052 18 1135 XP_006716051 18 1135 NP_003649 18 1135 NP_001002811 16 5631 NP_954854 16 5631 XP_005276195 16 5631 XP_006711712 16 5631 XP_006711711 16 5631 XP_005277503 16 5631 XP_005273038 16 5631 XP_006711708 16 5631 XP_005277500 16 5631 XP_006711707 16 5631 XP_005277499 16 5631 XP_006711706 16 5631 XP_006711705 16 5631 XP_005277559 16 5631 XP_006710144 16 5631 NP_036336 16 5631 NP_004051 16 5631 NP_001122318 16 7355 NP_001122320 16 7355 NP_001122321 16 7355 NP_001122317 16 7355 NP_003063 16 7355 NP_001122319 16 7355 NP_001122316 16 7355 NP_003061 16 7355 NP_001276325 16 7355 NP_620614 16 7355 NP_001276326 16 7355 NP_061028 16 7355 NP_001096068 16 7355 NP_001096067 16 7355 NP_001096069 16 7355 NP_001096070 16 7355 XP_005260092 16 7355 XP_005260091 16 7355 XP_005260090 16 7355 XP_005260089 16 7355 XP_005260088 16 7355 XP_005260087 16 7355 XP_005260085 16 7355 XP_006722910 16 7355 XP_006722909 16 7355 XP_006722908 16 7355 XP_006721104 16 7355 XP_005255321 16 7355 NP_775889 16 7355 NP_733793 15 9605 NP_689856 15 9605 NP_068777 15 9605 XP_006722199 15 9605 XP_005257785 15 9605 NP_115510 15 9605>NP_000236 Length = 1390 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 FMLDRILSK 9 FMLD ILSK Sbjct: 821 FMLDGILSK 829>NP_001120972 Length = 1408 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 FMLDRILSK 9 FMLD ILSK Sbjct: 839 FMLDGILSK 847>XP_006716054 Length = 960 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 FMLDRILSK 9 FMLD ILSK Sbjct: 391 FMLDGILSK 399>XP_006716053 Length = 960 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 FMLDRILSK 9 FMLD ILSK Sbjct: 391 FMLDGILSK 399>XP_006716052 Length = 1409 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 FMLDRILSK 9 FMLD ILSK Sbjct: 840 FMLDGILSK 848>XP_006716051 Length = 1427 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 FMLDRILSK 9 FMLD ILSK Sbjct: 858 FMLDGILSK 866>NP_003649 Length = 279 Score = 18.5 bits (36), Expect = 1135 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 FMLDRILSK 9 FM+D ILSK Sbjct: 25 FMIDEILSK 33>NP_001002811 Length = 1132 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 FMLDRI 6 FMLDRI Sbjct: 56 FMLDRI 61>NP_954854 Length = 295 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 MLDRILSK 9 +LDR LSK Sbjct: 79 LLDRFLSK 86>XP_005276195 Length = 381 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 FMLDRI 6 FMLDRI Sbjct: 56 FMLDRI 61>XP_006711712 Length = 2473 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 FMLDRI 6 FMLDRI Sbjct: 56 FMLDRI 61>XP_006711711 Length = 2482 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 FMLDRI 6 FMLDRI Sbjct: 56 FMLDRI 61>XP_005277503 Length = 2498 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 FMLDRI 6 FMLDRI Sbjct: 56 FMLDRI 61>XP_005273038 Length = 2509 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 FMLDRI 6 FMLDRI Sbjct: 56 FMLDRI 61>XP_006711708 Length = 2512 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 FMLDRI 6 FMLDRI Sbjct: 56 FMLDRI 61>XP_005277500 Length = 2525 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 FMLDRI 6 FMLDRI Sbjct: 56 FMLDRI 61>XP_006711707 Length = 2553 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 FMLDRI 6 FMLDRI Sbjct: 56 FMLDRI 61>XP_005277499 Length = 2561 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 FMLDRI 6 FMLDRI Sbjct: 56 FMLDRI 61>XP_006711706 Length = 2591 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 FMLDRI 6 FMLDRI Sbjct: 56 FMLDRI 61>XP_006711705 Length = 2592 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 FMLDRI 6 FMLDRI Sbjct: 56 FMLDRI 61>XP_005277559 Length = 381 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 FMLDRI 6 FMLDRI Sbjct: 56 FMLDRI 61>XP_006710144 Length = 564 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 FMLDRI 6 FMLDRI Sbjct: 56 FMLDRI 61>NP_036336 Length = 822 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 FMLDRILS 8 FMLDR+ + Sbjct: 145 FMLDRVFN 152>NP_004051 Length = 295 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 MLDRILSK 9 +LDR LSK Sbjct: 79 LLDRFLSK 86>NP_001122318 Length = 1616 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 MLDRILSK 9 +LDRIL K Sbjct: 1084 LLDRILPK 1091>NP_001122320 Length = 1613 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 MLDRILSK 9 +LDRIL K Sbjct: 1084 LLDRILPK 1091>NP_001122321 Length = 1679 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 MLDRILSK 9 +LDRIL K Sbjct: 1084 LLDRILPK 1091>NP_001122317 Length = 1617 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 MLDRILSK 9 +LDRIL K Sbjct: 1084 LLDRILPK 1091>NP_003063 Length = 1647 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 MLDRILSK 9 +LDRIL K Sbjct: 1084 LLDRILPK 1091>NP_001122319 Length = 1614 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 MLDRILSK 9 +LDRIL K Sbjct: 1084 LLDRILPK 1091>NP_001122316 Length = 1647 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 MLDRILSK 9 +LDRIL K Sbjct: 1084 LLDRILPK 1091>NP_003061 Length = 1590 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 MLDRILSK 9 +LDRIL K Sbjct: 1054 LLDRILPK 1061>NP_001276325 Length = 1590 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 MLDRILSK 9 +LDRIL K Sbjct: 1054 LLDRILPK 1061>NP_620614 Length = 1572 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 MLDRILSK 9 +LDRIL K Sbjct: 1054 LLDRILPK 1061>NP_001276326 Length = 1514 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 MLDRILSK 9 +LDRIL K Sbjct: 996 LLDRILPK 1003>NP_061028 Length = 632 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 MLDRILSK 9 +LDR+LS+ Sbjct: 62 ILDRVLSR 69>NP_001096068 Length = 491 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 FMLDRILS 8 F+LD ILS Sbjct: 202 FLLDSILS 209>NP_001096067 Length = 596 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 FMLDRILS 8 F+LD ILS Sbjct: 202 FLLDSILS 209>NP_001096069 Length = 503 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 FMLDRILS 8 F+LD ILS Sbjct: 202 FLLDSILS 209>NP_001096070 Length = 584 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 FMLDRILS 8 F+LD ILS Sbjct: 202 FLLDSILS 209>XP_005260092 Length = 1613 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 MLDRILSK 9 +LDRIL K Sbjct: 1084 LLDRILPK 1091>XP_005260091 Length = 1614 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 MLDRILSK 9 +LDRIL K Sbjct: 1084 LLDRILPK 1091>XP_005260090 Length = 1616 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 MLDRILSK 9 +LDRIL K Sbjct: 1084 LLDRILPK 1091>XP_005260089 Length = 1617 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 MLDRILSK 9 +LDRIL K Sbjct: 1084 LLDRILPK 1091>XP_005260088 Length = 1646 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 MLDRILSK 9 +LDRIL K Sbjct: 1084 LLDRILPK 1091>XP_005260087 Length = 1646 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 MLDRILSK 9 +LDRIL K Sbjct: 1084 LLDRILPK 1091>XP_005260085 Length = 1650 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 MLDRILSK 9 +LDRIL K Sbjct: 1084 LLDRILPK 1091>XP_006722910 Length = 1678 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 MLDRILSK 9 +LDRIL K Sbjct: 1084 LLDRILPK 1091>XP_006722909 Length = 1679 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 MLDRILSK 9 +LDRIL K Sbjct: 1084 LLDRILPK 1091>XP_006722908 Length = 1679 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 MLDRILSK 9 +LDRIL K Sbjct: 1084 LLDRILPK 1091>XP_006721104 Length = 193 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 FMLDRIL 7 F+LDR+L Sbjct: 52 FLLDRLL 58>XP_005255321 Length = 205 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 FMLDRIL 7 F+LDR+L Sbjct: 52 FLLDRLL 58>NP_775889 Length = 244 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 FMLDRIL 7 F+LDR+L Sbjct: 52 FLLDRLL 58>NP_733793 Length = 1280 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 MLDRIL 7 MLDRIL Sbjct: 48 MLDRIL 53>NP_689856 Length = 1749 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 FMLDRILS 8 F+LDRI S Sbjct: 1292 FLLDRINS 1299>NP_068777 Length = 488 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 FMLDRILS 8 F +DRILS Sbjct: 176 FGIDRILS 183>XP_006722199 Length = 641 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 MLDRILSK 9 MLDR+L++ Sbjct: 285 MLDRLLTE 292>XP_005257785 Length = 1887 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 MLDRILSK 9 MLDR+L++ Sbjct: 1531 MLDRLLTE 1538>NP_115510 Length = 1663 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 MLDRILSK 9 MLDR+L++ Sbjct: 1365 MLDRLLTE 1372Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.344 0.154 0.412 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 384,596 Number of extensions: 497 Number of successful extensions: 59 Number of sequences better than 10000.0: 59 Number of HSP's gapped: 59 Number of HSP's successfully gapped: 59 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.6 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |