Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_000042 19 869 XP_005271621 19 869 XP_006718907 19 869 XP_006718906 19 869 XP_005271619 19 869 XP_005271618 19 869 NP_001020015 17 2528 NP_002222 17 2528 NP_001091949 17 2528 XP_006726155 17 2528 XP_006726154 17 2528 XP_006726153 17 2528 XP_006726152 17 2528 XP_006718286 17 2528 XP_006718285 17 2528 NP_149991 17 3301 NP_057390 17 4312 NP_005189 16 5631 NP_002107 16 5631 NP_775759 16 5631 NP_001275931 16 5631 NP_775860 16 5631 NP_653267 16 5631 NP_976222 16 5631 XP_005271931 16 5631 NP_001229687 16 5631 NP_001136025 16 7355 NP_001136024 16 7355 NP_060261 16 7355 NP_001096619 16 7355 NP_001182212 16 7355 NP_006090 16 7355 NP_115947 16 7355 NP_001007541 16 7355 NP_003250 16 7355 XP_006717368 16 7355 XP_005271175 16 7355 NP_149044 16 7355 NP_060685 16 7355 NP_055064 15 9605 NP_057430 15 9605 NP_001129575 15 9605 NP_997186 15 9605 NP_004426 15 9605 NP_060415 15 9605 NP_078904 15 9605 NP_001182412 15 9605>NP_000042 Length = 3056 Score = 18.9 bits (37), Expect = 869 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 LLGAIIQG 9 LLGAIIQG Sbjct: 507 LLGAIIQG 514>XP_005271621 Length = 2708 Score = 18.9 bits (37), Expect = 869 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 LLGAIIQG 9 LLGAIIQG Sbjct: 159 LLGAIIQG 166>XP_006718907 Length = 3050 Score = 18.9 bits (37), Expect = 869 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 LLGAIIQG 9 LLGAIIQG Sbjct: 507 LLGAIIQG 514>XP_006718906 Length = 3056 Score = 18.9 bits (37), Expect = 869 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 LLGAIIQG 9 LLGAIIQG Sbjct: 507 LLGAIIQG 514>XP_005271619 Length = 3056 Score = 18.9 bits (37), Expect = 869 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 LLGAIIQG 9 LLGAIIQG Sbjct: 507 LLGAIIQG 514>XP_005271618 Length = 3056 Score = 18.9 bits (37), Expect = 869 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 LLGAIIQG 9 LLGAIIQG Sbjct: 507 LLGAIIQG 514>NP_001020015 Length = 242 Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 FLLGAIIQG 9 F+LGA+I G Sbjct: 21 FILGAVILG 29>NP_002222 Length = 267 Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 FLLGAIIQG 9 F+LGA+I G Sbjct: 21 FILGAVILG 29>NP_001091949 Length = 442 Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 FLLGAIIQG 9 FLLG + QG Sbjct: 363 FLLGVLFQG 371>XP_006726155 Length = 394 Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 FLLGAIIQG 9 FLLG + QG Sbjct: 369 FLLGVLFQG 377>XP_006726154 Length = 431 Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 FLLGAIIQG 9 FLLG + QG Sbjct: 352 FLLGVLFQG 360>XP_006726153 Length = 435 Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 FLLGAIIQG 9 FLLG + QG Sbjct: 363 FLLGVLFQG 371>XP_006726152 Length = 448 Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 FLLGAIIQG 9 FLLG + QG Sbjct: 369 FLLGVLFQG 377>XP_006718286 Length = 267 Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 FLLGAIIQG 9 F+LGA+I G Sbjct: 21 FILGAVILG 29>XP_006718285 Length = 308 Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 FLLGAIIQG 9 F+LGA+I G Sbjct: 62 FILGAVILG 70>NP_149991 Length = 553 Score = 16.9 bits (32), Expect = 3301 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 LLGAIIQG 9 L+GA++QG Sbjct: 12 LVGAVVQG 19>NP_057390 Length = 358 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 FLLGAIIQG 9 +L+GA+I G Sbjct: 15 YLIGAVIAG 23>NP_005189 Length = 395 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LLGAIIQG 9 L GAI+QG Sbjct: 105 LYGAILQG 112>NP_002107 Length = 365 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LLGAIIQG 9 LLGA+I G Sbjct: 317 LLGAVITG 324>NP_775759 Length = 719 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 FLLGAIIQG 9 F+LG +QG Sbjct: 232 FILGQTVQG 240>NP_001275931 Length = 719 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 FLLGAIIQG 9 F+LG +QG Sbjct: 232 FILGQTVQG 240>NP_775860 Length = 597 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 LLGAIIQ 8 LLGAI+Q Sbjct: 126 LLGAIVQ 132>NP_653267 Length = 4753 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 LLGAIIQ 8 LLGAI+Q Sbjct: 126 LLGAIVQ 132>NP_976222 Length = 184 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 FLLGAII 7 FLLGAI+ Sbjct: 4 FLLGAIL 10>XP_005271931 Length = 719 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 FLLGAIIQG 9 F+LG +QG Sbjct: 232 FILGQTVQG 240>NP_001229687 Length = 365 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LLGAIIQG 9 LLGA+I G Sbjct: 317 LLGAVITG 324>NP_001136025 Length = 709 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 LLGAIIQ 8 LLGA++Q Sbjct: 146 LLGAVVQ 152>NP_001136024 Length = 1369 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 LLGAIIQ 8 LLGA++Q Sbjct: 146 LLGAVVQ 152>NP_060261 Length = 526 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 LLGAIIQG 9 +LGA+I G Sbjct: 358 MLGAVISG 365>NP_001096619 Length = 378 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 LLGAIIQ 8 LLGA++Q Sbjct: 153 LLGAVVQ 159>NP_001182212 Length = 321 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 LLGAIIQG 9 +LGA+I G Sbjct: 153 MLGAVISG 160>NP_006090 Length = 628 Score = 15.8 bits (29), Expect = 7355 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 FLLGAIIQG 9 F LGA IQG Sbjct: 520 FPLGADIQG 528>NP_115947 Length = 506 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 FLLGAIIQG 9 FL+ +IQG Sbjct: 79 FLMNGLIQG 87>NP_001007541 Length = 788 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 FLLGAIIQG 9 +LLG ++QG Sbjct: 705 WLLGRLLQG 713>NP_003250 Length = 924 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 LGAIIQG 9 LGA+I+G Sbjct: 532 LGAVIEG 538>XP_006717368 Length = 376 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 FLLGAIIQG 9 FL+ +IQG Sbjct: 79 FLMNGLIQG 87>XP_005271175 Length = 468 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 FLLGAIIQG 9 FL+ +IQG Sbjct: 49 FLMNGLIQG 57>NP_149044 Length = 490 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 FLLGAIIQG 9 FL+ +IQG Sbjct: 71 FLMNGLIQG 79>NP_060685 Length = 439 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 LLGAIIQ 8 LLGA++Q Sbjct: 153 LLGAVVQ 159>NP_055064 Length = 410 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 FLLGAI 6 FLLGAI Sbjct: 261 FLLGAI 266>NP_057430 Length = 367 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 FLLGAI 6 FLLGAI Sbjct: 261 FLLGAI 266>NP_001129575 Length = 1108 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 LLGAIIQG 9 LLG +I+G Sbjct: 25 LLGKVIEG 32>NP_997186 Length = 1379 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 GAIIQG 9 GAI+QG Sbjct: 461 GAIVQG 466>NP_004426 Length = 297 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 3 LGAIIQG 9 LGA+++G Sbjct: 16 LGAVVEG 22>NP_060415 Length = 424 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 FLLGAI 6 FLLGAI Sbjct: 20 FLLGAI 25>NP_078904 Length = 714 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 FLLGAI 6 FLLGAI Sbjct: 284 FLLGAI 289>NP_001182412 Length = 714 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 FLLGAI 6 FLLGAI Sbjct: 284 FLLGAI 289Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.339 0.165 0.475 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 409,921 Number of extensions: 875 Number of successful extensions: 47 Number of sequences better than 10000.0: 47 Number of HSP's gapped: 47 Number of HSP's successfully gapped: 47 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.3 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |