Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_001277144 20 390 NP_001277143 20 390 NP_001077383 20 390 NP_001320 20 390 NP_073713 20 390 XP_005269629 20 390 XP_005269628 20 390 XP_005269627 20 390 XP_005269626 20 390 XP_006717706 20 390 XP_005269625 20 390 XP_005269624 20 390 XP_006717705 20 390 XP_005269622 20 390 XP_005269621 20 390 XP_006717704 20 390 XP_005269619 20 390 XP_005269618 20 390 NP_955452 18 1935 XP_006713543 18 1935 NP_065970 17 4312 XP_005250117 17 4312 XP_006712718 17 4312 XP_005246766 17 4312 XP_006712717 17 4312 NP_003583 17 4312 NP_079120 16 5631 XP_005257750 16 5631 XP_005257747 16 5631 XP_006722157 16 5631 NP_001171753 16 7355 NP_061896 16 7355 NP_059509 16 7355 NP_001276947 16 7355 XP_006721262 16 7355 XP_005256050 16 7355 XP_006721261 16 7355 XP_005256049 16 7355 XP_005256046 16 7355 XP_006721259 16 7355 XP_005256045 16 7355 NP_009181 15 9605 NP_001319 15 9605 NP_001012632 15 9605 NP_001266282 15 9605 NP_071938 15 9605 NP_065112 15 9605 NP_001275939 15 9605 NP_001266284 15 9605 NP_009190 15 9605 NP_001266283 15 9605 XP_005262036 15 9605 XP_005262035 15 9605 XP_005262034 15 9605 XP_006724100 15 9605 XP_005255557 15 9605 XP_005272320 15 9605 XP_005272319 15 9605 XP_005272318 15 9605 XP_006711205 15 9605 XP_005246002 15 9605 NP_001400 15 9605>NP_001277144 Length = 445 Score = 20.0 bits (40), Expect = 390 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 LGVQRVYT 9 LGVQRVYT Sbjct: 221 LGVQRVYT 228>NP_001277143 Length = 445 Score = 20.0 bits (40), Expect = 390 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 LGVQRVYT 9 LGVQRVYT Sbjct: 221 LGVQRVYT 228>NP_001077383 Length = 445 Score = 20.0 bits (40), Expect = 390 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 LGVQRVYT 9 LGVQRVYT Sbjct: 221 LGVQRVYT 228>NP_001320 Length = 445 Score = 20.0 bits (40), Expect = 390 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 LGVQRVYT 9 LGVQRVYT Sbjct: 221 LGVQRVYT 228>NP_073713 Length = 985 Score = 20.0 bits (40), Expect = 390 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 LGVQRVYT 9 LGVQRVYT Sbjct: 761 LGVQRVYT 768>XP_005269629 Length = 445 Score = 20.0 bits (40), Expect = 390 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 LGVQRVYT 9 LGVQRVYT Sbjct: 221 LGVQRVYT 228>XP_005269628 Length = 445 Score = 20.0 bits (40), Expect = 390 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 LGVQRVYT 9 LGVQRVYT Sbjct: 221 LGVQRVYT 228>XP_005269627 Length = 445 Score = 20.0 bits (40), Expect = 390 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 LGVQRVYT 9 LGVQRVYT Sbjct: 221 LGVQRVYT 228>XP_005269626 Length = 445 Score = 20.0 bits (40), Expect = 390 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 LGVQRVYT 9 LGVQRVYT Sbjct: 221 LGVQRVYT 228>XP_006717706 Length = 445 Score = 20.0 bits (40), Expect = 390 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 LGVQRVYT 9 LGVQRVYT Sbjct: 221 LGVQRVYT 228>XP_005269625 Length = 445 Score = 20.0 bits (40), Expect = 390 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 LGVQRVYT 9 LGVQRVYT Sbjct: 221 LGVQRVYT 228>XP_005269624 Length = 445 Score = 20.0 bits (40), Expect = 390 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 LGVQRVYT 9 LGVQRVYT Sbjct: 221 LGVQRVYT 228>XP_006717705 Length = 445 Score = 20.0 bits (40), Expect = 390 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 LGVQRVYT 9 LGVQRVYT Sbjct: 221 LGVQRVYT 228>XP_005269622 Length = 445 Score = 20.0 bits (40), Expect = 390 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 LGVQRVYT 9 LGVQRVYT Sbjct: 221 LGVQRVYT 228>XP_005269621 Length = 445 Score = 20.0 bits (40), Expect = 390 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 LGVQRVYT 9 LGVQRVYT Sbjct: 221 LGVQRVYT 228>XP_006717704 Length = 445 Score = 20.0 bits (40), Expect = 390 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 LGVQRVYT 9 LGVQRVYT Sbjct: 221 LGVQRVYT 228>XP_005269619 Length = 445 Score = 20.0 bits (40), Expect = 390 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 LGVQRVYT 9 LGVQRVYT Sbjct: 221 LGVQRVYT 228>XP_005269618 Length = 445 Score = 20.0 bits (40), Expect = 390 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 LGVQRVYT 9 LGVQRVYT Sbjct: 221 LGVQRVYT 228>NP_955452 Length = 2590 Score = 17.7 bits (34), Expect = 1935 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 FLGVQRVY 8 FLG++R+Y Sbjct: 2223 FLGMERIY 2230>XP_006713543 Length = 2591 Score = 17.7 bits (34), Expect = 1935 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 FLGVQRVY 8 FLG++R+Y Sbjct: 2224 FLGMERIY 2231>NP_065970 Length = 1657 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 FLGVQRVY 8 FLGVQR + Sbjct: 1522 FLGVQRKF 1529>XP_005250117 Length = 776 Score = 16.5 bits (31), Expect = 4312 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 GVQRVYT 9 G+Q+VYT Sbjct: 27 GIQQVYT 33>XP_006712718 Length = 969 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 FLGVQRVY 8 FLGVQR + Sbjct: 834 FLGVQRKF 841>XP_005246766 Length = 1656 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 FLGVQRVY 8 FLGVQR + Sbjct: 1521 FLGVQRKF 1528>XP_006712717 Length = 1657 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 FLGVQRVY 8 FLGVQR + Sbjct: 1522 FLGVQRKF 1529>NP_003583 Length = 776 Score = 16.5 bits (31), Expect = 4312 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 GVQRVYT 9 G+Q+VYT Sbjct: 27 GIQQVYT 33>NP_079120 Length = 656 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 FLGVQRV 7 FLG+QR+ Sbjct: 79 FLGLQRI 85>XP_005257750 Length = 330 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 FLGVQRV 7 FLG+QR+ Sbjct: 79 FLGLQRI 85>XP_005257747 Length = 402 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 FLGVQRV 7 FLG+QR+ Sbjct: 79 FLGLQRI 85>XP_006722157 Length = 611 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 FLGVQRV 7 FLG+QR+ Sbjct: 79 FLGLQRI 85>NP_001171753 Length = 642 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 LGVQRVYT 9 LGV++V+T Sbjct: 371 LGVEQVFT 378>NP_061896 Length = 692 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 LGVQRVYT 9 LGV++V+T Sbjct: 421 LGVEQVFT 428>NP_059509 Length = 655 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 FLGVQRVY 8 FLG+ R+Y Sbjct: 336 FLGIIRLY 343>NP_001276947 Length = 692 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 LGVQRVYT 9 LGV++V+T Sbjct: 421 LGVEQVFT 428>XP_006721262 Length = 502 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 LGVQRVYT 9 LGV++V+T Sbjct: 421 LGVEQVFT 428>XP_005256050 Length = 613 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 LGVQRVYT 9 LGV++V+T Sbjct: 342 LGVEQVFT 349>XP_006721261 Length = 613 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 LGVQRVYT 9 LGV++V+T Sbjct: 342 LGVEQVFT 349>XP_005256049 Length = 613 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 LGVQRVYT 9 LGV++V+T Sbjct: 342 LGVEQVFT 349>XP_005256046 Length = 692 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 LGVQRVYT 9 LGV++V+T Sbjct: 421 LGVEQVFT 428>XP_006721259 Length = 692 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 LGVQRVYT 9 LGV++V+T Sbjct: 421 LGVEQVFT 428>XP_005256045 Length = 692 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 LGVQRVYT 9 LGV++V+T Sbjct: 421 LGVEQVFT 428>NP_009181 Length = 359 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 FLGVQRVYT 9 F G +VYT Sbjct: 278 FAGCSKVYT 286>NP_001319 Length = 440 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LGVQRVYT 9 LG+QRV T Sbjct: 215 LGLQRVST 222>NP_001012632 Length = 429 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LGVQRVYT 9 LG+QRV T Sbjct: 204 LGLQRVST 211>NP_001266282 Length = 538 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 GVQRVYT 9 GV+ VYT Sbjct: 353 GVENVYT 359>NP_071938 Length = 476 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 GVQRVYT 9 GVQ +YT Sbjct: 437 GVQELYT 443>NP_065112 Length = 630 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 FLGVQRVYT 9 F G+Q VY+ Sbjct: 562 FSGIQDVYS 570>NP_001275939 Length = 590 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 FLGVQRVYT 9 F G+Q VY+ Sbjct: 562 FSGIQDVYS 570>NP_001266284 Length = 447 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 GVQRVYT 9 GV+ VYT Sbjct: 335 GVENVYT 341>NP_009190 Length = 570 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 GVQRVYT 9 GV+ VYT Sbjct: 458 GVENVYT 464>NP_001266283 Length = 534 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 GVQRVYT 9 GV+ VYT Sbjct: 422 GVENVYT 428>XP_005262036 Length = 359 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 FLGVQRVYT 9 F G +VYT Sbjct: 278 FAGCSKVYT 286>XP_005262035 Length = 359 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 FLGVQRVYT 9 F G +VYT Sbjct: 278 FAGCSKVYT 286>XP_005262034 Length = 359 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 FLGVQRVYT 9 F G +VYT Sbjct: 278 FAGCSKVYT 286>XP_006724100 Length = 305 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 2 LGVQRVY 8 LGV+++Y Sbjct: 299 LGVEKIY 305>XP_005255557 Length = 374 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 GVQRVYT 9 GVQ +YT Sbjct: 335 GVQELYT 341>XP_005272320 Length = 430 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LGVQRVYT 9 LG+QRV T Sbjct: 204 LGLQRVST 211>XP_005272319 Length = 430 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LGVQRVYT 9 LG+QRV T Sbjct: 204 LGLQRVST 211>XP_005272318 Length = 441 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LGVQRVYT 9 LG+QRV T Sbjct: 215 LGLQRVST 222>XP_006711205 Length = 503 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 GVQRVYT 9 GV+ VYT Sbjct: 458 GVENVYT 464>XP_005246002 Length = 387 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 FLGVQRVYT 9 F G+Q VY+ Sbjct: 319 FSGIQDVYS 327>NP_001400 Length = 1541 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 FLGVQRVYT 9 ++G ++VYT Sbjct: 93 YMGYRQVYT 101Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.339 0.153 0.457 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 470,086 Number of extensions: 796 Number of successful extensions: 62 Number of sequences better than 10000.0: 62 Number of HSP's gapped: 62 Number of HSP's successfully gapped: 62 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.4 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |