Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_064450 21 229 XP_005273257 21 229 NP_003117 18 1135 XP_005260978 18 1135 NP_079046 17 2528 XP_006712828 17 2528 XP_006712827 17 2528 XP_006712826 17 2528 XP_006712825 17 2528 NP_612450 17 4312 XP_006715390 17 4312 NP_689609 16 5631 XP_006713034 16 5631 XP_006713033 16 5631 XP_006713032 16 5631 XP_005264924 16 5631 YP_003024028 16 5631 NP_036413 16 7355 NP_000304 16 7355 NP_006721 16 7355 NP_001009932 16 7355 NP_001009933 16 7355 NP_001009934 16 7355 NP_001269512 16 7355 NP_001269514 16 7355 NP_001269511 16 7355 NP_001269513 16 7355 NP_115724 16 7355 XP_005277886 16 7355 XP_005250379 16 7355 XP_005247683 16 7355 XP_006710765 16 7355 XP_005244815 16 7355 NP_000234 15 9605 NP_001185465 15 9605 NP_067675 15 9605 NP_079471 15 9605 NP_071400 15 9605 NP_055947 15 9605 XP_006724655 15 9605 XP_005257947 15 9605 XP_006720942 15 9605 XP_006716559 15 9605 XP_005249729 15 9605>NP_064450 Length = 1722 Score = 20.8 bits (42), Expect = 229 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 FLETRAYFF 9 FLET AYFF Sbjct: 1638 FLETTAYFF 1646>XP_005273257 Length = 1726 Score = 20.8 bits (42), Expect = 229 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 FLETRAYFF 9 FLET AYFF Sbjct: 1642 FLETTAYFF 1650>NP_003117 Length = 2419 Score = 18.5 bits (36), Expect = 1135 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 2 LETRAYF 8 LETRAYF Sbjct: 2174 LETRAYF 2180>XP_005260978 Length = 483 Score = 18.5 bits (36), Expect = 1135 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 FLETRAYFF 9 FL+T AY+F Sbjct: 354 FLDTSAYYF 362>NP_079046 Length = 407 Score = 17.3 bits (33), Expect = 2528 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 TRAYFF 9 TRAYFF Sbjct: 337 TRAYFF 342>XP_006712828 Length = 357 Score = 17.3 bits (33), Expect = 2528 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 TRAYFF 9 TRAYFF Sbjct: 287 TRAYFF 292>XP_006712827 Length = 362 Score = 17.3 bits (33), Expect = 2528 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 TRAYFF 9 TRAYFF Sbjct: 292 TRAYFF 297>XP_006712826 Length = 407 Score = 17.3 bits (33), Expect = 2528 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 TRAYFF 9 TRAYFF Sbjct: 337 TRAYFF 342>XP_006712825 Length = 455 Score = 17.3 bits (33), Expect = 2528 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 TRAYFF 9 TRAYFF Sbjct: 385 TRAYFF 390>NP_612450 Length = 522 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 FLETRAYFF 9 + TRAY+F Sbjct: 242 YSNTRAYYF 250>XP_006715390 Length = 445 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 FLETRAYFF 9 + TRAY+F Sbjct: 242 YSNTRAYYF 250>NP_689609 Length = 284 Score = 16.2 bits (30), Expect = 5631 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 TRAYFF 9 TR+YFF Sbjct: 217 TRSYFF 222>XP_006713034 Length = 239 Score = 16.2 bits (30), Expect = 5631 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 TRAYFF 9 TR+YFF Sbjct: 172 TRSYFF 177>XP_006713033 Length = 284 Score = 16.2 bits (30), Expect = 5631 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 TRAYFF 9 TR+YFF Sbjct: 217 TRSYFF 222>XP_006713032 Length = 284 Score = 16.2 bits (30), Expect = 5631 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 TRAYFF 9 TR+YFF Sbjct: 217 TRSYFF 222>XP_005264924 Length = 284 Score = 16.2 bits (30), Expect = 5631 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 TRAYFF 9 TR+YFF Sbjct: 217 TRSYFF 222>YP_003024028 Length = 513 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 LETRAYF 8 ++TRAYF Sbjct: 299 VDTRAYF 305>NP_036413 Length = 630 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 ETRAYFF 9 ET+ YFF Sbjct: 79 ETQQYFF 85>NP_000304 Length = 676 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 LETRAYF 8 LET+ YF Sbjct: 421 LETKVYF 427>NP_006721 Length = 302 Score = 15.8 bits (29), Expect = 7355 Identities = 4/9 (44%), Positives = 7/9 (77%) Query: 1 FLETRAYFF 9 ++ET YF+ Sbjct: 95 YMETYVYFY 103>NP_001009932 Length = 302 Score = 15.8 bits (29), Expect = 7355 Identities = 4/9 (44%), Positives = 7/9 (77%) Query: 1 FLETRAYFF 9 ++ET YF+ Sbjct: 95 YMETYVYFY 103>NP_001009933 Length = 302 Score = 15.8 bits (29), Expect = 7355 Identities = 4/9 (44%), Positives = 7/9 (77%) Query: 1 FLETRAYFF 9 ++ET YF+ Sbjct: 95 YMETYVYFY 103>NP_001009934 Length = 302 Score = 15.8 bits (29), Expect = 7355 Identities = 4/9 (44%), Positives = 7/9 (77%) Query: 1 FLETRAYFF 9 ++ET YF+ Sbjct: 95 YMETYVYFY 103>NP_001269512 Length = 433 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 ETRAYFF 9 E+RA+FF Sbjct: 324 ESRAHFF 330>NP_001269514 Length = 450 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 ETRAYFF 9 E+RA+FF Sbjct: 333 ESRAHFF 339>NP_001269511 Length = 442 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 ETRAYFF 9 E+RA+FF Sbjct: 333 ESRAHFF 339>NP_001269513 Length = 341 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 ETRAYFF 9 E+RA+FF Sbjct: 232 ESRAHFF 238>NP_115724 Length = 442 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 ETRAYFF 9 E+RA+FF Sbjct: 333 ESRAHFF 339>XP_005277886 Length = 302 Score = 15.8 bits (29), Expect = 7355 Identities = 4/9 (44%), Positives = 7/9 (77%) Query: 1 FLETRAYFF 9 ++ET YF+ Sbjct: 95 YMETYVYFY 103>XP_005250379 Length = 372 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 ETRAYFF 9 ET+ YFF Sbjct: 79 ETQQYFF 85>XP_005247683 Length = 708 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 LETRAYF 8 LET+ YF Sbjct: 453 LETKVYF 459>XP_006710765 Length = 343 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 ETRAYFF 9 E+RA+FF Sbjct: 232 ESRAHFF 238>XP_005244815 Length = 444 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 ETRAYFF 9 E+RA+FF Sbjct: 333 ESRAHFF 339>NP_000234 Length = 781 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 FLETRAYFF 9 FLE + +FF Sbjct: 472 FLEQQEHFF 480>NP_001185465 Length = 445 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 FLETRAYFF 9 FLE + +FF Sbjct: 261 FLEQQEHFF 269>NP_067675 Length = 343 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 ETRAYFF 9 ET+AY F Sbjct: 123 ETKAYVF 129>NP_079471 Length = 372 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 ETRAYFF 9 ET+AY F Sbjct: 153 ETKAYVF 159>NP_071400 Length = 693 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 FLETRAYF 8 F+ET YF Sbjct: 455 FMETTDYF 462>NP_055947 Length = 957 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 FLETRAY 7 FLE +AY Sbjct: 672 FLENKAY 678>XP_006724655 Length = 694 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 FLETRAYF 8 F+ET YF Sbjct: 455 FMETTDYF 462>XP_005257947 Length = 1935 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 5/6 (83%) Query: 3 ETRAYF 8 ETR YF Sbjct: 717 ETRVYF 722>XP_006720942 Length = 780 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 FLETRAYFF 9 FLE + +FF Sbjct: 471 FLEQQEHFF 479>XP_006716559 Length = 262 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 ETRAYFF 9 ET+AY F Sbjct: 43 ETKAYVF 49>XP_005249729 Length = 968 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 FLETRAY 7 FLE +AY Sbjct: 683 FLENKAY 689Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.353 0.159 0.511 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 453,845 Number of extensions: 663 Number of successful extensions: 44 Number of sequences better than 10000.0: 44 Number of HSP's gapped: 44 Number of HSP's successfully gapped: 44 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 14 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.9 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |