Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_004110 20 509 NP_001243323 18 1482 NP_060418 18 1482 XP_006717236 18 1482 XP_006717235 18 1482 XP_006717234 18 1482 XP_006717233 18 1482 XP_006717232 18 1482 XP_006717231 18 1482 XP_006717230 18 1482 XP_006717229 18 1482 NP_003115 18 1935 NP_001157588 18 1935 NP_065089 18 1935 NP_001157586 18 1935 XP_006723894 18 1935 NP_060220 17 3301 NP_001899 17 4312 NP_680091 17 4312 NP_680093 17 4312 NP_680090 17 4312 NP_680092 17 4312 XP_006716308 17 4312 XP_006716307 17 4312 NP_620706 16 5631 NP_003066 16 5631 NP_001123892 16 5631 NP_001161052 16 5631 NP_055663 16 5631 NP_060506 16 5631 XP_005255055 16 5631 XP_005255054 16 5631 XP_006720250 16 5631 XP_005269161 16 5631 XP_005269160 16 5631 XP_005269159 16 5631 XP_005269158 16 5631 NP_775960 16 7355 NP_003310 16 7355 NP_597676 16 7355 NP_001243779 16 7355 NP_596869 16 7355 NP_620155 16 7355 NP_001157936 16 7355 XP_005251991 16 7355 XP_005246888 16 7355 XP_006712788 16 7355 XP_006712787 16 7355 XP_006712786 16 7355 XP_006712770 16 7355 XP_006712325 16 7355 NP_001254479 16 7355 NP_597681 16 7355 NP_001182657 15 9605 NP_004162 15 9605 NP_446464 15 9605 NP_000041 15 9605 NP_001239581 15 9605 XP_005253124 15 9605 XP_006718340 15 9605 XP_005253123 15 9605 XP_005272257 15 9605 XP_005272256 15 9605>NP_004110 Length = 993 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 FLEFKSGVH 9 FLEFKS VH Sbjct: 801 FLEFKSCVH 809>NP_001243323 Length = 1099 Score = 18.1 bits (35), Expect = 1482 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 EFKSGVH 9 +FKSGVH Sbjct: 272 DFKSGVH 278>NP_060418 Length = 1167 Score = 18.1 bits (35), Expect = 1482 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 EFKSGVH 9 +FKSGVH Sbjct: 340 DFKSGVH 346>XP_006717236 Length = 1041 Score = 18.1 bits (35), Expect = 1482 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 EFKSGVH 9 +FKSGVH Sbjct: 214 DFKSGVH 220>XP_006717235 Length = 1041 Score = 18.1 bits (35), Expect = 1482 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 EFKSGVH 9 +FKSGVH Sbjct: 214 DFKSGVH 220>XP_006717234 Length = 1041 Score = 18.1 bits (35), Expect = 1482 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 EFKSGVH 9 +FKSGVH Sbjct: 214 DFKSGVH 220>XP_006717233 Length = 1099 Score = 18.1 bits (35), Expect = 1482 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 EFKSGVH 9 +FKSGVH Sbjct: 272 DFKSGVH 278>XP_006717232 Length = 1099 Score = 18.1 bits (35), Expect = 1482 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 EFKSGVH 9 +FKSGVH Sbjct: 272 DFKSGVH 278>XP_006717231 Length = 1129 Score = 18.1 bits (35), Expect = 1482 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 EFKSGVH 9 +FKSGVH Sbjct: 340 DFKSGVH 346>XP_006717230 Length = 1167 Score = 18.1 bits (35), Expect = 1482 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 EFKSGVH 9 +FKSGVH Sbjct: 340 DFKSGVH 346>XP_006717229 Length = 1167 Score = 18.1 bits (35), Expect = 1482 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 EFKSGVH 9 +FKSGVH Sbjct: 340 DFKSGVH 346>NP_003115 Length = 261 Score = 17.7 bits (34), Expect = 1935 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 EFKSGVH 9 EFKSG H Sbjct: 249 EFKSGAH 255>NP_001157588 Length = 786 Score = 17.7 bits (34), Expect = 1935 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 FLEFKSGVH 9 FL+F GVH Sbjct: 493 FLDFARGVH 501>NP_065089 Length = 786 Score = 17.7 bits (34), Expect = 1935 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 FLEFKSGVH 9 FL+F GVH Sbjct: 493 FLDFARGVH 501>NP_001157586 Length = 732 Score = 17.7 bits (34), Expect = 1935 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 FLEFKSGVH 9 FL+F GVH Sbjct: 439 FLDFARGVH 447>XP_006723894 Length = 732 Score = 17.7 bits (34), Expect = 1935 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 FLEFKSGVH 9 FL+F GVH Sbjct: 439 FLDFARGVH 447>NP_060220 Length = 610 Score = 16.9 bits (32), Expect = 3301 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 LEFKSGVH 9 LEF +G+H Sbjct: 114 LEFDTGIH 121>NP_001899 Length = 339 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 FLEFKSGVH 9 FL +KSGV+ Sbjct: 259 FLLYKSGVY 267>NP_680091 Length = 339 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 FLEFKSGVH 9 FL +KSGV+ Sbjct: 259 FLLYKSGVY 267>NP_680093 Length = 339 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 FLEFKSGVH 9 FL +KSGV+ Sbjct: 259 FLLYKSGVY 267>NP_680090 Length = 339 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 FLEFKSGVH 9 FL +KSGV+ Sbjct: 259 FLLYKSGVY 267>NP_680092 Length = 339 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 FLEFKSGVH 9 FL +KSGV+ Sbjct: 259 FLLYKSGVY 267>XP_006716308 Length = 339 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 FLEFKSGVH 9 FL +KSGV+ Sbjct: 259 FLLYKSGVY 267>XP_006716307 Length = 339 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 FLEFKSGVH 9 FL +KSGV+ Sbjct: 259 FLLYKSGVY 267>NP_620706 Length = 1130 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 FLEFKSG 7 FL+FK+G Sbjct: 81 FLDFKAG 87>NP_003066 Length = 1214 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 FLEFKSG 7 FL+FK+G Sbjct: 81 FLDFKAG 87>NP_001123892 Length = 1152 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 FLEFKSG 7 FL+FK+G Sbjct: 81 FLDFKAG 87>NP_001161052 Length = 532 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 FLEFKSGVH 9 FLE K G H Sbjct: 368 FLEQKEGCH 376>NP_055663 Length = 683 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 FLEFKSGVH 9 FLE K G H Sbjct: 519 FLEQKEGCH 527>NP_060506 Length = 2078 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 FLEFKSGVH 9 F FKS VH Sbjct: 1003 FSAFKSAVH 1011>XP_005255055 Length = 683 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 FLEFKSGVH 9 FLE K G H Sbjct: 519 FLEQKEGCH 527>XP_005255054 Length = 683 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 FLEFKSGVH 9 FLE K G H Sbjct: 519 FLEQKEGCH 527>XP_006720250 Length = 2077 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 FLEFKSGVH 9 F FKS VH Sbjct: 1002 FSAFKSAVH 1010>XP_005269161 Length = 1151 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 FLEFKSG 7 FL+FK+G Sbjct: 81 FLDFKAG 87>XP_005269160 Length = 1213 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 FLEFKSG 7 FL+FK+G Sbjct: 81 FLDFKAG 87>XP_005269159 Length = 1244 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 FLEFKSG 7 FL+FK+G Sbjct: 81 FLDFKAG 87>XP_005269158 Length = 1245 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 FLEFKSG 7 FL+FK+G Sbjct: 81 FLDFKAG 87>NP_775960 Length = 1285 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 FKSGVH 9 F+SGVH Sbjct: 415 FESGVH 420>NP_003310 Length = 26926 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 5/7 (71%) Query: 3 EFKSGVH 9 EFK G H Sbjct: 24482 EFKGGYH 24488>NP_597676 Length = 27051 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 5/7 (71%) Query: 3 EFKSGVH 9 EFK G H Sbjct: 24607 EFKGGYH 24613>NP_001243779 Length = 34350 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 5/7 (71%) Query: 3 EFKSGVH 9 EFK G H Sbjct: 31906 EFKGGYH 31912>NP_596869 Length = 33423 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 5/7 (71%) Query: 3 EFKSGVH 9 EFK G H Sbjct: 30979 EFKGGYH 30985>NP_620155 Length = 446 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 FLEFKSG 7 FL+F+SG Sbjct: 406 FLDFESG 412>NP_001157936 Length = 446 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 FLEFKSG 7 FL+F+SG Sbjct: 406 FLDFESG 412>XP_005251991 Length = 953 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 FKSGVH 9 F+SGVH Sbjct: 83 FESGVH 88>XP_005246888 Length = 22663 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 5/7 (71%) Query: 3 EFKSGVH 9 EFK G H Sbjct: 20219 EFKGGYH 20225>XP_006712788 Length = 24022 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 5/7 (71%) Query: 3 EFKSGVH 9 EFK G H Sbjct: 21578 EFKGGYH 21584>XP_006712787 Length = 33978 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 5/7 (71%) Query: 3 EFKSGVH 9 EFK G H Sbjct: 31534 EFKGGYH 31540>XP_006712786 Length = 35484 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 5/7 (71%) Query: 3 EFKSGVH 9 EFK G H Sbjct: 33040 EFKGGYH 33046>XP_006712770 Length = 446 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 FLEFKSG 7 FL+F+SG Sbjct: 406 FLDFESG 412>XP_006712325 Length = 446 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 FLEFKSG 7 FL+F+SG Sbjct: 406 FLDFESG 412>NP_001254479 Length = 35991 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 5/7 (71%) Query: 3 EFKSGVH 9 EFK G H Sbjct: 33547 EFKGGYH 33553>NP_597681 Length = 27118 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 5/7 (71%) Query: 3 EFKSGVH 9 EFK G H Sbjct: 24674 EFKGGYH 24680>NP_001182657 Length = 565 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 LEFKSGVH 9 LEFK G++ Sbjct: 225 LEFKDGMN 232>NP_004162 Length = 574 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 LEFKSGVH 9 LEFK G++ Sbjct: 234 LEFKDGMN 241>NP_446464 Length = 412 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 LEFKSGV 8 +EFK GV Sbjct: 225 IEFKKGV 231>NP_000041 Length = 412 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 LEFKSGV 8 +EFK GV Sbjct: 225 IEFKKGV 231>NP_001239581 Length = 565 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 LEFKSGVH 9 LEFK G++ Sbjct: 225 LEFKDGMN 232>XP_005253124 Length = 571 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 LEFKSGVH 9 LEFK G++ Sbjct: 231 LEFKDGMN 238>XP_006718340 Length = 579 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 LEFKSGVH 9 LEFK G++ Sbjct: 239 LEFKDGMN 246>XP_005253123 Length = 590 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 LEFKSGVH 9 LEFK G++ Sbjct: 250 LEFKDGMN 257>XP_005272257 Length = 412 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 LEFKSGV 8 +EFK GV Sbjct: 225 IEFKKGV 231>XP_005272256 Length = 444 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 LEFKSGV 8 +EFK GV Sbjct: 257 IEFKKGV 263Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.331 0.148 0.457 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 556,409 Number of extensions: 931 Number of successful extensions: 63 Number of sequences better than 10000.0: 63 Number of HSP's gapped: 63 Number of HSP's successfully gapped: 63 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.1 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |