Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value XP_005255877 17 3301 XP_005255876 17 3301 XP_005255874 17 3301 XP_006721218 17 3301 XP_005255872 17 3301 NP_710155 17 3301 NP_055935 17 4312 NP_004381 17 4312 NP_065856 17 4312 XP_006722575 17 4312 NP_149055 16 5631 NP_689413 16 5631 NP_055241 16 5631 NP_001269383 16 5631 NP_775922 16 5631 NP_001276881 16 5631 NP_001276880 16 5631 NP_001008401 16 5631 XP_005246791 16 5631 XP_005246789 16 5631 NP_055928 16 7355 NP_733751 16 7355 NP_689668 16 7355 NP_001120914 16 7355 NP_612201 16 7355 NP_525124 16 7355 NP_001077422 16 7355 NP_001258573 16 7355 NP_001258572 16 7355 NP_002069 16 7355 NP_071348 16 7355 NP_001166184 16 7355 XP_006721797 16 7355 XP_006721796 16 7355 XP_005256618 16 7355 XP_005256617 16 7355 XP_006720464 16 7355 XP_006716241 16 7355 XP_005250769 16 7355 XP_005250768 16 7355 XP_005250767 16 7355 XP_006716142 16 7355 XP_005250088 16 7355 XP_006716141 16 7355 XP_005250085 16 7355 XP_006716140 16 7355 XP_005250084 16 7355 XP_005250083 16 7355 XP_005250082 16 7355 XP_005265132 16 7355 XP_005265131 16 7355 XP_006713173 16 7355 XP_005265130 16 7355 XP_005265129 16 7355 XP_005265128 16 7355 XP_005265127 16 7355 XP_005265126 16 7355 XP_006712131 16 7355 XP_006712130 16 7355 XP_006712129 16 7355 XP_006712128 16 7355 XP_006712127 16 7355 XP_006712126 16 7355 XP_006712125 16 7355 XP_006712124 16 7355 NP_001139017 16 7355 NP_001120913 16 7355 NP_853514 15 9605 NP_001012999 15 9605 XP_006715469 15 9605 XP_005266931 15 9605>XP_005255877 Length = 352 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 FKSLVSSHR 9 FKSL+ SH+ Sbjct: 140 FKSLLISHK 148>XP_005255876 Length = 352 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 FKSLVSSHR 9 FKSL+ SH+ Sbjct: 140 FKSLLISHK 148>XP_005255874 Length = 407 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 FKSLVSSHR 9 FKSL+ SH+ Sbjct: 195 FKSLLISHK 203>XP_006721218 Length = 407 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 FKSLVSSHR 9 FKSL+ SH+ Sbjct: 195 FKSLLISHK 203>XP_005255872 Length = 430 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 FKSLVSSHR 9 FKSL+ SH+ Sbjct: 218 FKSLLISHK 226>NP_710155 Length = 407 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 FKSLVSSHR 9 FKSL+ SH+ Sbjct: 195 FKSLLISHK 203>NP_055935 Length = 4169 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 FKSLVSSHR 9 FKSL SH+ Sbjct: 3680 FKSLEKSHK 3688>NP_004381 Length = 335 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 FKSLVSSHR 9 FKS +S HR Sbjct: 35 FKSWMSKHR 43>NP_065856 Length = 628 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 FKSLVSSH 8 F+SL SSH Sbjct: 58 FRSLFSSH 65>XP_006722575 Length = 672 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 FKSLVSSH 8 F+SL SSH Sbjct: 102 FRSLFSSH 109>NP_149055 Length = 637 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 FKSLVSSH 8 FK+L+S+H Sbjct: 119 FKALLSAH 126>NP_689413 Length = 404 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 FKSLVSSH 8 FK VSSH Sbjct: 136 FKKTVSSH 143>NP_055241 Length = 404 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 FKSLVSSH 8 FK VSSH Sbjct: 136 FKKTVSSH 143>NP_001269383 Length = 299 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 FKSLVSSH 8 FK VSSH Sbjct: 31 FKKTVSSH 38>NP_775922 Length = 6996 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 FKSLVSSHR 9 +KSL+ HR Sbjct: 5125 YKSLIQIHR 5133>NP_001276881 Length = 746 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 FKSLVSSHR 9 FKS++ HR Sbjct: 309 FKSILERHR 317>NP_001276880 Length = 746 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 FKSLVSSHR 9 FKS++ HR Sbjct: 309 FKSILERHR 317>NP_001008401 Length = 746 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 FKSLVSSHR 9 FKS++ HR Sbjct: 309 FKSILERHR 317>XP_005246791 Length = 593 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 FKSLVSSH 8 FK+L+S+H Sbjct: 119 FKALLSAH 126>XP_005246789 Length = 613 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 FKSLVSSH 8 FK+L+S+H Sbjct: 119 FKALLSAH 126>NP_055928 Length = 2961 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 KSLVSSHR 9 +SLVS HR Sbjct: 70 ESLVSRHR 77>NP_733751 Length = 4911 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 LVSSHR 9 LVSSHR Sbjct: 4126 LVSSHR 4131>NP_689668 Length = 852 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 FKSLVSSHR 9 FKSL +S+R Sbjct: 465 FKSLQTSYR 473>NP_001120914 Length = 403 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 FKSLVSSH 8 FK+L+S H Sbjct: 316 FKALISIH 323>NP_612201 Length = 404 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 FKSLVSSH 8 F+SL+ SH Sbjct: 59 FRSLLESH 66>NP_525124 Length = 436 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 FKSLVSSH 8 FK+L+S H Sbjct: 316 FKALISIH 323>NP_001077422 Length = 1953 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 FKSLVSSHR 9 FK+L+ HR Sbjct: 415 FKNLLQMHR 423>NP_001258573 Length = 894 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 FKSLVSSHR 9 FK+L+ HR Sbjct: 415 FKNLLQMHR 423>NP_001258572 Length = 937 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 FKSLVSSHR 9 FK+L+ HR Sbjct: 415 FKNLLQMHR 423>NP_002069 Length = 2230 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 FKSLVSSH 8 F+SL SSH Sbjct: 1185 FQSLKSSH 1192>NP_071348 Length = 1953 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 FKSLVSSHR 9 FK+L+ HR Sbjct: 415 FKNLLQMHR 423>NP_001166184 Length = 2243 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 FKSLVSSH 8 F+SL SSH Sbjct: 1207 FQSLKSSH 1214>XP_006721797 Length = 362 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 FKSLVSSH 8 F+SL+ SH Sbjct: 17 FRSLLESH 24>XP_006721796 Length = 396 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 FKSLVSSH 8 F+SL+ SH Sbjct: 51 FRSLLESH 58>XP_005256618 Length = 2962 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 KSLVSSHR 9 +SLVS HR Sbjct: 70 ESLVSRHR 77>XP_005256617 Length = 2966 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 KSLVSSHR 9 +SLVS HR Sbjct: 70 ESLVSRHR 77>XP_006720464 Length = 852 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 FKSLVSSHR 9 FKSL +S+R Sbjct: 465 FKSLQTSYR 473>XP_006716241 Length = 403 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 FKSLVSSH 8 FK+L+S H Sbjct: 316 FKALISIH 323>XP_005250769 Length = 436 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 FKSLVSSH 8 FK+L+S H Sbjct: 316 FKALISIH 323>XP_005250768 Length = 436 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 FKSLVSSH 8 FK+L+S H Sbjct: 316 FKALISIH 323>XP_005250767 Length = 436 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 FKSLVSSH 8 FK+L+S H Sbjct: 316 FKALISIH 323>XP_006716142 Length = 4927 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 LVSSHR 9 LVSSHR Sbjct: 4142 LVSSHR 4147>XP_005250088 Length = 4928 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 LVSSHR 9 LVSSHR Sbjct: 4143 LVSSHR 4148>XP_006716141 Length = 4959 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 LVSSHR 9 LVSSHR Sbjct: 4174 LVSSHR 4179>XP_005250085 Length = 4979 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 LVSSHR 9 LVSSHR Sbjct: 4198 LVSSHR 4203>XP_006716140 Length = 4982 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 LVSSHR 9 LVSSHR Sbjct: 4197 LVSSHR 4202>XP_005250084 Length = 4982 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 LVSSHR 9 LVSSHR Sbjct: 4197 LVSSHR 4202>XP_005250083 Length = 4982 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 LVSSHR 9 LVSSHR Sbjct: 4197 LVSSHR 4202>XP_005250082 Length = 4983 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 LVSSHR 9 LVSSHR Sbjct: 4198 LVSSHR 4203>XP_005265132 Length = 2214 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 FKSLVSSH 8 F+SL SSH Sbjct: 1169 FQSLKSSH 1176>XP_005265131 Length = 2245 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 FKSLVSSH 8 F+SL SSH Sbjct: 1207 FQSLKSSH 1214>XP_006713173 Length = 2250 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 FKSLVSSH 8 F+SL SSH Sbjct: 1205 FQSLKSSH 1212>XP_005265130 Length = 2252 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 FKSLVSSH 8 F+SL SSH Sbjct: 1207 FQSLKSSH 1214>XP_005265129 Length = 2269 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 FKSLVSSH 8 F+SL SSH Sbjct: 1224 FQSLKSSH 1231>XP_005265128 Length = 2278 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 FKSLVSSH 8 F+SL SSH Sbjct: 1240 FQSLKSSH 1247>XP_005265127 Length = 2283 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 FKSLVSSH 8 F+SL SSH Sbjct: 1240 FQSLKSSH 1247>XP_005265126 Length = 2285 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 FKSLVSSH 8 F+SL SSH Sbjct: 1240 FQSLKSSH 1247>XP_006712131 Length = 1453 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 FKSLVSSHR 9 FK+L+ HR Sbjct: 415 FKNLLQMHR 423>XP_006712130 Length = 1831 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 FKSLVSSHR 9 FK+L+ HR Sbjct: 415 FKNLLQMHR 423>XP_006712129 Length = 1832 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 FKSLVSSHR 9 FK+L+ HR Sbjct: 415 FKNLLQMHR 423>XP_006712128 Length = 1879 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 FKSLVSSHR 9 FK+L+ HR Sbjct: 415 FKNLLQMHR 423>XP_006712127 Length = 1909 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 FKSLVSSHR 9 FK+L+ HR Sbjct: 415 FKNLLQMHR 423>XP_006712126 Length = 1913 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 FKSLVSSHR 9 FK+L+ HR Sbjct: 375 FKNLLQMHR 383>XP_006712125 Length = 1952 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 FKSLVSSHR 9 FK+L+ HR Sbjct: 415 FKNLLQMHR 423>XP_006712124 Length = 1953 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 FKSLVSSHR 9 FK+L+ HR Sbjct: 415 FKNLLQMHR 423>NP_001139017 Length = 154 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 SLVSSHR 9 SLV SHR Sbjct: 101 SLVGSHR 107>NP_001120913 Length = 436 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 FKSLVSSH 8 FK+L+S H Sbjct: 316 FKALISIH 323>NP_853514 Length = 1732 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 SLVSSH 8 SLVSSH Sbjct: 1042 SLVSSH 1047>NP_001012999 Length = 967 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 FKSLVSSHR 9 FKSL S+R Sbjct: 397 FKSLQKSYR 405Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 FKSLVSSHR 9 FKSL S+R Sbjct: 554 FKSLQKSYR 562>XP_006715469 Length = 1235 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 SLVSSHR 9 SL+SSH+ Sbjct: 71 SLISSHQ 77>XP_005266931 Length = 1283 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 SLVSSHR 9 SL+SSH+ Sbjct: 119 SLISSHQ 125Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.324 0.125 0.337 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 477,564 Number of extensions: 1107 Number of successful extensions: 72 Number of sequences better than 10000.0: 71 Number of HSP's gapped: 72 Number of HSP's successfully gapped: 72 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.0 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.1 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |