Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_004351 20 299 NP_001091102 17 4312 XP_006717115 17 4312 NP_001091105 17 4312 NP_001481 17 4312 NP_001091103 17 4312 NP_001091104 17 4312 NP_063945 16 7355 NP_004414 16 7355 NP_004412 16 7355 NP_001127928 16 7355 NP_659474 16 7355 NP_004413 16 7355 XP_006721532 16 7355 XP_005256559 16 7355 XP_006717250 16 7355 XP_005266151 16 7355 XP_005247229 16 7355 XP_005244790 16 7355 XP_005244789 16 7355 XP_005244788 16 7355 NP_001229825 15 9605 NP_001229826 15 9605 NP_055477 15 9605 NP_001129501 15 9605 NP_722523 15 9605 NP_065201 15 9605 XP_005261924 15 9605 XP_006724450 15 9605 XP_006724449 15 9605 XP_005261923 15 9605 XP_006724448 15 9605 XP_006724447 15 9605 XP_005261922 15 9605 XP_005261921 15 9605 XP_005261920 15 9605 XP_005261919 15 9605 XP_005248797 15 9605 XP_005248796 15 9605 XP_005248795 15 9605>NP_004351 Length = 882 Score = 20.4 bits (41), Expect = 299 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 FKGSVMKGA 9 FKGSVM+GA Sbjct: 267 FKGSVMEGA 275>NP_001091102 Length = 428 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 FKGSVMKGA 9 F+G V KGA Sbjct: 359 FEGDVSKGA 367>XP_006717115 Length = 428 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 FKGSVMKGA 9 F+G V KGA Sbjct: 359 FEGDVSKGA 367>NP_001091105 Length = 428 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 FKGSVMKGA 9 F+G V KGA Sbjct: 359 FEGDVSKGA 367>NP_001481 Length = 428 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 FKGSVMKGA 9 F+G V KGA Sbjct: 359 FEGDVSKGA 367>NP_001091103 Length = 428 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 FKGSVMKGA 9 F+G V KGA Sbjct: 359 FEGDVSKGA 367>NP_001091104 Length = 428 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 FKGSVMKGA 9 F+G V KGA Sbjct: 359 FEGDVSKGA 367>NP_063945 Length = 644 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 KGSVMKG 8 KGS+ KG Sbjct: 516 KGSIFKG 522>NP_004414 Length = 716 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 GSVMKG 8 GS+MKG Sbjct: 279 GSIMKG 284>NP_004412 Length = 670 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 GSVMKG 8 GS+MKG Sbjct: 281 GSIMKG 286>NP_001127928 Length = 559 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 FKGSVMKG 8 FKG +KG Sbjct: 264 FKGGYLKG 271>NP_659474 Length = 559 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 FKGSVMKG 8 FKG +KG Sbjct: 264 FKGGYLKG 271>NP_004413 Length = 736 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 GSVMKG 8 GS+MKG Sbjct: 297 GSIMKG 302>XP_006721532 Length = 523 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 GSVMKG 8 GS+MKG Sbjct: 297 GSIMKG 302>XP_005256559 Length = 732 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 GSVMKG 8 GS+MKG Sbjct: 293 GSIMKG 298>XP_006717250 Length = 610 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 KGSVMKG 8 KGS+ KG Sbjct: 482 KGSIFKG 488>XP_005266151 Length = 643 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 KGSVMKG 8 KGS+ KG Sbjct: 515 KGSIFKG 521>XP_005247229 Length = 718 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 GSVMKG 8 GS+MKG Sbjct: 279 GSIMKG 284>XP_005244790 Length = 549 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 GSVMKG 8 GS+MKG Sbjct: 281 GSIMKG 286>XP_005244789 Length = 574 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 GSVMKG 8 GS+MKG Sbjct: 281 GSIMKG 286>XP_005244788 Length = 695 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 GSVMKG 8 GS+MKG Sbjct: 281 GSIMKG 286>NP_001229825 Length = 1603 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 KGSVMKG 8 KG+ MKG Sbjct: 1008 KGTAMKG 1014>NP_001229826 Length = 1503 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 KGSVMKG 8 KG+ MKG Sbjct: 930 KGTAMKG 936>NP_055477 Length = 1572 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 KGSVMKG 8 KG+ MKG Sbjct: 999 KGTAMKG 1005>NP_001129501 Length = 1594 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 KGSVMKG 8 KG+ MKG Sbjct: 999 KGTAMKG 1005>NP_722523 Length = 946 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 FKGSVMKGA 9 FK + M+GA Sbjct: 514 FKSTTMEGA 522>NP_065201 Length = 893 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 FKGSVMKGA 9 FK + M+GA Sbjct: 461 FKSTTMEGA 469>XP_005261924 Length = 1176 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 KGSVMKG 8 KG+ MKG Sbjct: 1008 KGTAMKG 1014>XP_006724450 Length = 1187 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 KGSVMKG 8 KG+ MKG Sbjct: 1008 KGTAMKG 1014>XP_006724449 Length = 1198 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 KGSVMKG 8 KG+ MKG Sbjct: 1008 KGTAMKG 1014>XP_005261923 Length = 1307 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 KGSVMKG 8 KG+ MKG Sbjct: 1008 KGTAMKG 1014>XP_006724448 Length = 1490 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 KGSVMKG 8 KG+ MKG Sbjct: 895 KGTAMKG 901>XP_006724447 Length = 1516 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 KGSVMKG 8 KG+ MKG Sbjct: 921 KGTAMKG 927>XP_005261922 Length = 1525 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 KGSVMKG 8 KG+ MKG Sbjct: 930 KGTAMKG 936>XP_005261921 Length = 1581 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 KGSVMKG 8 KG+ MKG Sbjct: 1008 KGTAMKG 1014>XP_005261920 Length = 1594 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 KGSVMKG 8 KG+ MKG Sbjct: 999 KGTAMKG 1005>XP_005261919 Length = 1603 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 KGSVMKG 8 KG+ MKG Sbjct: 1008 KGTAMKG 1014>XP_005248797 Length = 902 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 FKGSVMKGA 9 FK + M+GA Sbjct: 470 FKSTTMEGA 478>XP_005248796 Length = 937 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 FKGSVMKGA 9 FK + M+GA Sbjct: 505 FKSTTMEGA 513>XP_005248795 Length = 945 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 FKGSVMKGA 9 FK + M+GA Sbjct: 513 FKSTTMEGA 521Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.319 0.134 0.372 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 499,946 Number of extensions: 1240 Number of successful extensions: 40 Number of sequences better than 10000.0: 40 Number of HSP's gapped: 40 Number of HSP's successfully gapped: 40 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.8 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |