Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_000042 20 509 XP_006718908 20 509 XP_005271621 20 509 XP_006718907 20 509 XP_006718906 20 509 XP_005271619 20 509 XP_005271618 20 509 NP_848658 18 1482 XP_006716026 18 1482 XP_006716025 18 1482 XP_006716024 18 1482 NP_001155130 17 4312 NP_001155128 17 4312 NP_001123645 17 4312 NP_001325 17 4312 XP_006717822 17 4312 XP_006717821 17 4312 XP_005269749 17 4312 XP_006717820 17 4312 NP_065081 17 4312 NP_002155 16 5631 NP_001035830 16 5631 NP_000087 16 7355 NP_115935 16 7355 NP_912730 16 7355 XP_006726609 16 7355 XP_006719787 16 7355 XP_006713565 16 7355 XP_006713564 16 7355 XP_006713563 16 7355 XP_006713562 16 7355 XP_005264492 16 7355 XP_006710027 16 7355 NP_078853 15 9605 NP_000325 15 9605 NP_008853 15 9605 NP_001035232 15 9605 NP_066287 15 9605 NP_001075145 15 9605 NP_001075146 15 9605 NP_001035233 15 9605 NP_001171455 15 9605 NP_055006 15 9605 NP_001124436 15 9605 NP_056075 15 9605 NP_078948 15 9605 NP_003787 15 9605 XP_005259419 15 9605 XP_006722767 15 9605 XP_005259889 15 9605 XP_005257623 15 9605 XP_006719619 15 9605 XP_006715729 15 9605 XP_006715728 15 9605 XP_006715727 15 9605 XP_006715726 15 9605 XP_005263278 15 9605 XP_005263277 15 9605 XP_006712742 15 9605 XP_005246813 15 9605 XP_005246812 15 9605 XP_005246811 15 9605 XP_005246810 15 9605 XP_005246808 15 9605 XP_005246807 15 9605 NP_872352 15 9605>NP_000042 Length = 3056 Score = 19.6 bits (39), Expect = 509 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 KALYLQQR 9 KALYLQQR Sbjct: 2966 KALYLQQR 2973>XP_006718908 Length = 1708 Score = 19.6 bits (39), Expect = 509 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 KALYLQQR 9 KALYLQQR Sbjct: 1618 KALYLQQR 1625>XP_005271621 Length = 2708 Score = 19.6 bits (39), Expect = 509 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 KALYLQQR 9 KALYLQQR Sbjct: 2618 KALYLQQR 2625>XP_006718907 Length = 3050 Score = 19.6 bits (39), Expect = 509 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 KALYLQQR 9 KALYLQQR Sbjct: 2960 KALYLQQR 2967>XP_006718906 Length = 3056 Score = 19.6 bits (39), Expect = 509 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 KALYLQQR 9 KALYLQQR Sbjct: 2966 KALYLQQR 2973>XP_005271619 Length = 3056 Score = 19.6 bits (39), Expect = 509 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 KALYLQQR 9 KALYLQQR Sbjct: 2966 KALYLQQR 2973>XP_005271618 Length = 3056 Score = 19.6 bits (39), Expect = 509 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 KALYLQQR 9 KALYLQQR Sbjct: 2966 KALYLQQR 2973>NP_848658 Length = 920 Score = 18.1 bits (35), Expect = 1482 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 KALYLQQR 9 K LYLQQR Sbjct: 480 KTLYLQQR 487>XP_006716026 Length = 859 Score = 18.1 bits (35), Expect = 1482 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 KALYLQQR 9 K LYLQQR Sbjct: 480 KTLYLQQR 487>XP_006716025 Length = 920 Score = 18.1 bits (35), Expect = 1482 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 KALYLQQR 9 K LYLQQR Sbjct: 480 KTLYLQQR 487>XP_006716024 Length = 920 Score = 18.1 bits (35), Expect = 1482 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 KALYLQQR 9 K LYLQQR Sbjct: 480 KTLYLQQR 487>NP_001155130 Length = 745 Score = 16.5 bits (31), Expect = 4312 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 KALYLQQR 9 KAL LQQR Sbjct: 413 KALQLQQR 420>NP_001155128 Length = 758 Score = 16.5 bits (31), Expect = 4312 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 KALYLQQR 9 KAL LQQR Sbjct: 426 KALQLQQR 433>NP_001123645 Length = 761 Score = 16.5 bits (31), Expect = 4312 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 KALYLQQR 9 KAL LQQR Sbjct: 429 KALQLQQR 436>NP_001325 Length = 321 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 FKALYLQQR 9 FKA+YL+ + Sbjct: 80 FKAIYLRSK 88>XP_006717822 Length = 810 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 FKALYLQQR 9 FK+LYL ++ Sbjct: 624 FKSLYLSEK 632>XP_006717821 Length = 846 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 FKALYLQQR 9 FK+LYL ++ Sbjct: 624 FKSLYLSEK 632>XP_005269749 Length = 901 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 FKALYLQQR 9 FK+LYL ++ Sbjct: 624 FKSLYLSEK 632>XP_006717820 Length = 949 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 FKALYLQQR 9 FK+LYL ++ Sbjct: 624 FKSLYLSEK 632>NP_065081 Length = 951 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 FKALYLQQR 9 FK+LYL ++ Sbjct: 624 FKSLYLSEK 632>NP_002155 Length = 403 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 FKALYLQQR 9 FKA+ +Q+R Sbjct: 185 FKAMQMQER 193>NP_001035830 Length = 321 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 ALYLQQR 9 ALYL+QR Sbjct: 106 ALYLRQR 112>NP_000087 Length = 1065 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 KALYLQ 7 KALYLQ Sbjct: 69 KALYLQ 74>NP_115935 Length = 400 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 ALYLQQ 8 ALYLQQ Sbjct: 319 ALYLQQ 324>NP_912730 Length = 358 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 ALYLQQ 8 ALYLQQ Sbjct: 277 ALYLQQ 282>XP_006726609 Length = 2838 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 KALYLQQR 9 KA+YL Q+ Sbjct: 848 KAIYLMQK 855>XP_006719787 Length = 2838 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 KALYLQQR 9 KA+YL Q+ Sbjct: 848 KAIYLMQK 855>XP_006713565 Length = 901 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 KALYLQ 7 KALYLQ Sbjct: 69 KALYLQ 74>XP_006713564 Length = 1065 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 KALYLQ 7 KALYLQ Sbjct: 69 KALYLQ 74>XP_006713563 Length = 1069 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 KALYLQ 7 KALYLQ Sbjct: 69 KALYLQ 74>XP_006713562 Length = 1090 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 KALYLQ 7 KALYLQ Sbjct: 69 KALYLQ 74>XP_005264492 Length = 326 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 ALYLQQ 8 ALYLQQ Sbjct: 245 ALYLQQ 250>XP_006710027 Length = 2837 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 KALYLQQR 9 KA+YL Q+ Sbjct: 847 KAIYLMQK 854>NP_078853 Length = 1288 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 ALYLQQR 9 A+YL+QR Sbjct: 577 AIYLKQR 583>NP_000325 Length = 1836 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 FKALYLQQR 9 F+ +Y++QR Sbjct: 1050 FEDIYIEQR 1058>NP_008853 Length = 2000 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 FKALYLQQR 9 F+ +Y++QR Sbjct: 1225 FEDIYIEQR 1233>NP_001035232 Length = 2005 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 FKALYLQQR 9 F+ +Y++QR Sbjct: 1227 FEDIYIEQR 1235>NP_066287 Length = 2005 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 FKALYLQQR 9 F+ +Y++QR Sbjct: 1227 FEDIYIEQR 1235>NP_001075145 Length = 1951 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 FKALYLQQR 9 F+ +Y++QR Sbjct: 1176 FEDIYIEQR 1184>NP_001075146 Length = 1951 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 FKALYLQQR 9 F+ +Y++QR Sbjct: 1176 FEDIYIEQR 1184>NP_001035233 Length = 2005 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 FKALYLQQR 9 F+ +Y++QR Sbjct: 1227 FEDIYIEQR 1235>NP_001171455 Length = 1939 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 FKALYLQQR 9 F+ +Y++QR Sbjct: 1217 FEDIYIEQR 1225>NP_055006 Length = 1980 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 FKALYLQQR 9 F+ +Y++QR Sbjct: 1217 FEDIYIEQR 1225>NP_001124436 Length = 777 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 KALYLQQR 9 + LYLQ+R Sbjct: 13 RELYLQER 20>NP_056075 Length = 1162 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 FKALYLQQR 9 FK ++LQ++ Sbjct: 953 FKVMFLQRK 961>NP_078948 Length = 903 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 KALYLQQR 9 + LYLQQ+ Sbjct: 795 RELYLQQK 802>NP_003787 Length = 535 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 FKALYLQQR 9 FKA LQQ+ Sbjct: 526 FKAARLQQK 534>XP_005259419 Length = 517 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 FKALYLQQR 9 FKA LQQ+ Sbjct: 508 FKAARLQQK 516>XP_006722767 Length = 645 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 FKALYLQQR 9 FK ++LQ++ Sbjct: 436 FKVMFLQRK 444>XP_005259889 Length = 1130 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 FKALYLQQR 9 FK ++LQ++ Sbjct: 921 FKVMFLQRK 929>XP_005257623 Length = 1836 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 FKALYLQQR 9 F+ +Y++QR Sbjct: 1050 FEDIYIEQR 1058>XP_006719619 Length = 1980 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 FKALYLQQR 9 F+ +Y++QR Sbjct: 1217 FEDIYIEQR 1225>XP_006715729 Length = 226 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 FKALYLQQ 8 F LY+QQ Sbjct: 14 FSVLYVQQ 21>XP_006715728 Length = 228 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 FKALYLQQ 8 F LY+QQ Sbjct: 14 FSVLYVQQ 21>XP_006715727 Length = 240 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 FKALYLQQ 8 F LY+QQ Sbjct: 14 FSVLYVQQ 21>XP_006715726 Length = 309 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 FKALYLQQ 8 F LY+QQ Sbjct: 14 FSVLYVQQ 21>XP_005263278 Length = 620 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 KALYLQQR 9 + LYLQQ+ Sbjct: 512 RELYLQQK 519>XP_005263277 Length = 759 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 KALYLQQR 9 + LYLQQ+ Sbjct: 651 RELYLQQK 658>XP_006712742 Length = 2000 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 FKALYLQQR 9 F+ +Y++QR Sbjct: 1225 FEDIYIEQR 1233>XP_005246813 Length = 1271 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 FKALYLQQR 9 F+ +Y++QR Sbjct: 493 FEDIYIEQR 501>XP_005246812 Length = 1754 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 FKALYLQQR 9 F+ +Y++QR Sbjct: 976 FEDIYIEQR 984>XP_005246811 Length = 1995 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 FKALYLQQR 9 F+ +Y++QR Sbjct: 1217 FEDIYIEQR 1225>XP_005246810 Length = 2005 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 FKALYLQQR 9 F+ +Y++QR Sbjct: 1227 FEDIYIEQR 1235>XP_005246808 Length = 2005 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 FKALYLQQR 9 F+ +Y++QR Sbjct: 1227 FEDIYIEQR 1235>XP_005246807 Length = 2005 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 FKALYLQQR 9 F+ +Y++QR Sbjct: 1227 FEDIYIEQR 1235>NP_872352 Length = 236 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 FKALYLQQ 8 F LY+QQ Sbjct: 14 FSVLYVQQ 21Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.340 0.145 0.406 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 487,938 Number of extensions: 659 Number of successful extensions: 66 Number of sequences better than 10000.0: 66 Number of HSP's gapped: 66 Number of HSP's successfully gapped: 66 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.5 bits) S2: 28 (15.4 bits)
|
CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |