Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_001121619 19 665 NP_000258 19 665 NP_001035957 19 665 XP_006721991 19 665 XP_006721990 19 665 XP_006721989 19 665 XP_005258041 19 665 XP_006721988 19 665 XP_006721987 19 665 XP_006721986 19 665 XP_005258040 19 665 XP_006721985 19 665 NP_008987 18 1935 NP_001265368 18 1935 XP_006723054 18 1935 NP_004256 16 7355 NP_001268430 16 7355 NP_001268431 16 7355 NP_055952 16 7355 XP_005250906 16 7355 NP_000676 15 9605 NP_033611 15 9605 NP_114438 15 9605 NP_004826 15 9605 NP_114038 15 9605 NP_001127891 15 9605 XP_005271302 15 9605 XP_005271301 15 9605 XP_005271298 15 9605 NP_001127892 15 9605 NP_003494 15 9605>NP_001121619 Length = 593 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 FKALKKAAQ 9 FKALKK AQ Sbjct: 201 FKALKKVAQ 209>NP_000258 Length = 2818 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 FKALKKAAQ 9 FKALKK AQ Sbjct: 201 FKALKKVAQ 209>NP_001035957 Length = 2839 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 FKALKKAAQ 9 FKALKK AQ Sbjct: 201 FKALKKVAQ 209>XP_006721991 Length = 1632 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 FKALKKAAQ 9 FKALKK AQ Sbjct: 201 FKALKKVAQ 209>XP_006721990 Length = 2823 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 FKALKKAAQ 9 FKALKK AQ Sbjct: 201 FKALKKVAQ 209>XP_006721989 Length = 2823 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 FKALKKAAQ 9 FKALKK AQ Sbjct: 201 FKALKKVAQ 209>XP_005258041 Length = 2836 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 FKALKKAAQ 9 FKALKK AQ Sbjct: 201 FKALKKVAQ 209>XP_006721988 Length = 2846 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 FKALKKAAQ 9 FKALKK AQ Sbjct: 201 FKALKKVAQ 209>XP_006721987 Length = 2849 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 FKALKKAAQ 9 FKALKK AQ Sbjct: 201 FKALKKVAQ 209>XP_006721986 Length = 2854 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 FKALKKAAQ 9 FKALKK AQ Sbjct: 188 FKALKKVAQ 196>XP_005258040 Length = 2857 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 FKALKKAAQ 9 FKALKK AQ Sbjct: 201 FKALKKVAQ 209>XP_006721985 Length = 2867 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 FKALKKAAQ 9 FKALKK AQ Sbjct: 201 FKALKKVAQ 209>NP_008987 Length = 674 Score = 17.7 bits (34), Expect = 1935 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 FKALKKAAQ 9 FKA KKAAQ Sbjct: 590 FKADKKAAQ 598>NP_001265368 Length = 612 Score = 17.7 bits (34), Expect = 1935 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 FKALKKAAQ 9 FKA KKAAQ Sbjct: 528 FKADKKAAQ 536>XP_006723054 Length = 445 Score = 17.7 bits (34), Expect = 1935 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 FKALKKAAQ 9 FKA KKAAQ Sbjct: 361 FKADKKAAQ 369>NP_004256 Length = 444 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 FKALKKAAQ 9 F+AL+K A+ Sbjct: 113 FRALRKTAE 121>NP_001268430 Length = 422 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 FKALKKAAQ 9 F+AL+K A+ Sbjct: 91 FRALRKTAE 99>NP_001268431 Length = 413 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 FKALKKAAQ 9 F+AL+K A+ Sbjct: 82 FRALRKTAE 90>NP_055952 Length = 821 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 FKALKKA 7 F+ALKKA Sbjct: 728 FEALKKA 734>XP_005250906 Length = 785 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 FKALKKA 7 F+ALKKA Sbjct: 692 FEALKKA 698>NP_000676 Length = 359 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 FKALKKA 7 +KALKKA Sbjct: 219 WKALKKA 225>NP_033611 Length = 359 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 FKALKKA 7 +KALKKA Sbjct: 219 WKALKKA 225>NP_114438 Length = 388 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 FKALKKA 7 +KALKKA Sbjct: 248 WKALKKA 254>NP_004826 Length = 394 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 FKALKKA 7 +KALKKA Sbjct: 254 WKALKKA 260>NP_114038 Length = 394 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 FKALKKA 7 +KALKKA Sbjct: 254 WKALKKA 260>NP_001127891 Length = 574 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 FKALKKAAQ 9 FKALK+ Q Sbjct: 162 FKALKRIHQ 170>XP_005271302 Length = 368 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 FKALKKAAQ 9 FKALK+ Q Sbjct: 162 FKALKRIHQ 170>XP_005271301 Length = 542 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 FKALKKAAQ 9 FKALK+ Q Sbjct: 162 FKALKRIHQ 170>XP_005271298 Length = 574 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 FKALKKAAQ 9 FKALK+ Q Sbjct: 162 FKALKRIHQ 170>NP_001127892 Length = 574 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 FKALKKAAQ 9 FKALK+ Q Sbjct: 162 FKALKRIHQ 170>NP_003494 Length = 574 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 FKALKKAAQ 9 FKALK+ Q Sbjct: 162 FKALKRIHQ 170Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.320 0.121 0.297 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 272,712 Number of extensions: 371 Number of successful extensions: 31 Number of sequences better than 10000.0: 31 Number of HSP's gapped: 31 Number of HSP's successfully gapped: 31 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.0 bits) S2: 28 (15.4 bits)
CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |