Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_001683 17 2528 NP_006412 17 2528 XP_006716481 17 2528 XP_005251193 17 2528 XP_005251192 17 2528 XP_005251191 17 2528 XP_005264425 17 2528 NP_443117 17 3301 XP_005268673 17 3301 NP_004688 17 4312 NP_001231855 17 4312 NP_004037 16 5631 NP_001001937 16 5631 NP_001244264 16 5631 NP_001001935 16 5631 NP_001684 16 5631 NP_001244263 16 5631 NP_001177951 16 7355 NP_006556 16 7355 NP_060352 16 7355 NP_001257880 16 7355 NP_001257879 16 7355 NP_003830 16 7355 NP_001265197 16 7355 NP_758424 16 7355 NP_061142 16 7355 NP_001265354 16 7355 NP_076418 16 7355 NP_001255979 16 7355 NP_001255983 16 7355 NP_001255971 16 7355 NP_001255970 16 7355 NP_001255978 16 7355 NP_001255972 16 7355 NP_001255981 16 7355 NP_542185 16 7355 NP_001264074 16 7355 NP_001255976 16 7355 NP_001255975 16 7355 NP_001255974 16 7355 NP_001255973 16 7355 NP_001255969 16 7355 NP_001255984 16 7355 NP_001255977 16 7355 NP_001255980 16 7355 NP_443124 16 7355 NP_001157915 16 7355 NP_001099009 16 7355 NP_116045 16 7355 XP_005255832 16 7355 XP_005253647 16 7355 XP_005251344 16 7355 NP_009128 16 7355 NP_003631 15 9605 NP_114409 15 9605 NP_001269869 15 9605 NP_001034934 15 9605 XP_005252342 15 9605 XP_005246372 15 9605 XP_005271295 15 9605 NP_112227 15 9605>NP_001683 Length = 513 Score = 17.3 bits (33), Expect = 2528 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 FITSGQIF 8 FIT GQI+ Sbjct: 365 FITEGQIY 372>NP_006412 Length = 1849 Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 FITSGQIFK 9 F+TS Q+FK Sbjct: 1673 FLTSQQLFK 1681>XP_006716481 Length = 1649 Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 FITSGQIFK 9 F+TS Q+FK Sbjct: 1473 FLTSQQLFK 1481>XP_005251193 Length = 1800 Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 FITSGQIFK 9 F+TS Q+FK Sbjct: 1673 FLTSQQLFK 1681>XP_005251192 Length = 1843 Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 FITSGQIFK 9 F+TS Q+FK Sbjct: 1667 FLTSQQLFK 1675>XP_005251191 Length = 1849 Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 FITSGQIFK 9 F+TS Q+FK Sbjct: 1673 FLTSQQLFK 1681>XP_005264425 Length = 471 Score = 17.3 bits (33), Expect = 2528 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 FITSGQIF 8 FIT GQI+ Sbjct: 323 FITEGQIY 330>NP_443117 Length = 648 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 FITSGQIF 8 FIT GQ F Sbjct: 215 FITGGQFF 222>XP_005268673 Length = 555 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 FITSGQIF 8 FIT GQ F Sbjct: 215 FITGGQFF 222>NP_004688 Length = 522 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 ITSGQIFK 9 ITSG++F+ Sbjct: 67 ITSGEVFE 74>NP_001231855 Length = 521 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 ITSGQIFK 9 ITSG++F+ Sbjct: 66 ITSGEVFE 73>NP_004037 Length = 553 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 ITSGQIF 8 IT GQIF Sbjct: 388 ITDGQIF 394>NP_001001937 Length = 553 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 ITSGQIF 8 IT GQIF Sbjct: 388 ITDGQIF 394>NP_001244264 Length = 503 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 ITSGQIF 8 IT GQIF Sbjct: 338 ITDGQIF 344>NP_001001935 Length = 503 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 ITSGQIF 8 IT GQIF Sbjct: 338 ITDGQIF 344>NP_001684 Length = 511 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 FITSGQIF 8 +IT GQI+ Sbjct: 371 YITEGQIY 378>NP_001244263 Length = 531 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 ITSGQIF 8 IT GQIF Sbjct: 366 ITDGQIF 372>NP_001177951 Length = 399 Score = 15.8 bits (29), Expect = 7355 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 FITSGQIFK 9 F+TSG++ + Sbjct: 3 FVTSGELVR 11>NP_006556 Length = 727 Score = 15.8 bits (29), Expect = 7355 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 FITSGQIFK 9 F+TSG++ + Sbjct: 331 FVTSGELVR 339>NP_060352 Length = 311 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 ITSGQIF 8 +T GQIF Sbjct: 225 VTEGQIF 231>NP_001257880 Length = 299 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 FITSGQI 7 FI+SGQ+ Sbjct: 216 FISSGQV 222>NP_001257879 Length = 337 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 FITSGQI 7 FI+SGQ+ Sbjct: 254 FISSGQV 260>NP_003830 Length = 616 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 FITSGQI 7 FI+SGQ+ Sbjct: 533 FISSGQV 539>NP_001265197 Length = 602 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 FITSGQI 7 FI+SGQ+ Sbjct: 519 FISSGQV 525>NP_758424 Length = 1642 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 TSGQIF 8 TSGQ+F Sbjct: 1353 TSGQVF 1358>NP_061142 Length = 1642 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 TSGQIF 8 TSGQ+F Sbjct: 1353 TSGQVF 1358>NP_001265354 Length = 1774 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 TSGQIF 8 TSGQ+F Sbjct: 1018 TSGQVF 1023>NP_076418 Length = 847 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 ITSGQIFK 9 + SG+IFK Sbjct: 369 VVSGKIFK 376>NP_001255979 Length = 422 Score = 15.8 bits (29), Expect = 7355 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 FITSGQIFK 9 F+TSG++ + Sbjct: 117 FVTSGELVR 125>NP_001255983 Length = 403 Score = 15.8 bits (29), Expect = 7355 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 FITSGQIFK 9 F+TSG++ + Sbjct: 60 FVTSGELVR 68>NP_001255971 Length = 662 Score = 15.8 bits (29), Expect = 7355 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 FITSGQIFK 9 F+TSG++ + Sbjct: 322 FVTSGELVR 330>NP_001255970 Length = 663 Score = 15.8 bits (29), Expect = 7355 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 FITSGQIFK 9 F+TSG++ + Sbjct: 322 FVTSGELVR 330>NP_001255978 Length = 460 Score = 15.8 bits (29), Expect = 7355 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 FITSGQIFK 9 F+TSG++ + Sbjct: 117 FVTSGELVR 125>NP_001255972 Length = 700 Score = 15.8 bits (29), Expect = 7355 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 FITSGQIFK 9 F+TSG++ + Sbjct: 322 FVTSGELVR 330>NP_001255981 Length = 404 Score = 15.8 bits (29), Expect = 7355 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 FITSGQIFK 9 F+TSG++ + Sbjct: 322 FVTSGELVR 330>NP_542185 Length = 663 Score = 15.8 bits (29), Expect = 7355 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 FITSGQIFK 9 F+TSG++ + Sbjct: 322 FVTSGELVR 330>NP_001264074 Length = 579 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 ITSGQIFK 9 + SG+IFK Sbjct: 77 VVSGKIFK 84>NP_001255976 Length = 573 Score = 15.8 bits (29), Expect = 7355 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 FITSGQIFK 9 F+TSG++ + Sbjct: 322 FVTSGELVR 330>NP_001255975 Length = 613 Score = 15.8 bits (29), Expect = 7355 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 FITSGQIFK 9 F+TSG++ + Sbjct: 322 FVTSGELVR 330>NP_001255974 Length = 627 Score = 15.8 bits (29), Expect = 7355 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 FITSGQIFK 9 F+TSG++ + Sbjct: 322 FVTSGELVR 330>NP_001255973 Length = 665 Score = 15.8 bits (29), Expect = 7355 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 FITSGQIFK 9 F+TSG++ + Sbjct: 322 FVTSGELVR 330>NP_001255969 Length = 663 Score = 15.8 bits (29), Expect = 7355 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 FITSGQIFK 9 F+TSG++ + Sbjct: 322 FVTSGELVR 330>NP_001255984 Length = 299 Score = 15.8 bits (29), Expect = 7355 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 FITSGQIFK 9 F+TSG++ + Sbjct: 60 FVTSGELVR 68>NP_001255977 Length = 483 Score = 15.8 bits (29), Expect = 7355 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 FITSGQIFK 9 F+TSG++ + Sbjct: 322 FVTSGELVR 330>NP_001255980 Length = 404 Score = 15.8 bits (29), Expect = 7355 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 FITSGQIFK 9 F+TSG++ + Sbjct: 322 FVTSGELVR 330>NP_443124 Length = 2459 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 TSGQIF 8 TSGQ+F Sbjct: 1703 TSGQVF 1708>NP_001157915 Length = 1873 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 ITSGQIFK 9 + SGQI+K Sbjct: 1736 VESGQIYK 1743>NP_001099009 Length = 871 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 ITSGQIFK 9 + SG+IFK Sbjct: 369 VVSGKIFK 376>NP_116045 Length = 1157 Score = 15.8 bits (29), Expect = 7355 Identities = 4/9 (44%), Positives = 7/9 (77%) Query: 1 FITSGQIFK 9 F+ GQ+F+ Sbjct: 1067 FLLEGQVFR 1075>XP_005255832 Length = 725 Score = 15.8 bits (29), Expect = 7355 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 FITSGQIFK 9 F+TSG++ + Sbjct: 331 FVTSGELVR 339>XP_005253647 Length = 1175 Score = 15.8 bits (29), Expect = 7355 Identities = 4/9 (44%), Positives = 7/9 (77%) Query: 1 FITSGQIFK 9 F+ GQ+F+ Sbjct: 1067 FLLEGQVFR 1075>XP_005251344 Length = 859 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 ITSGQIFK 9 + SG+IFK Sbjct: 369 VVSGKIFK 376>NP_009128 Length = 581 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 ITSGQIFK 9 ITSG I+K Sbjct: 551 ITSGGIYK 558>NP_003631 Length = 1332 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 ITSGQIFK 9 + GQIFK Sbjct: 573 LADGQIFK 580>NP_114409 Length = 467 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 TSGQIF 8 TSGQ+F Sbjct: 404 TSGQLF 409>NP_001269869 Length = 517 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 2 ITSGQIF 8 +TSG++F Sbjct: 151 LTSGEVF 157>NP_001034934 Length = 518 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 2 ITSGQIF 8 +TSG++F Sbjct: 151 LTSGEVF 157>XP_005252342 Length = 1218 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 ITSGQIFK 9 + GQIFK Sbjct: 459 LADGQIFK 466>XP_005246372 Length = 420 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 2 ITSGQIF 8 +TSG++F Sbjct: 53 LTSGEVF 59>XP_005271295 Length = 300 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 FITSGQIFK 9 FIT ++FK Sbjct: 261 FITEKRVFK 269>NP_112227 Length = 336 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 FITSGQIFK 9 FIT ++FK Sbjct: 297 FITEKRVFK 305Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.336 0.149 0.426 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 474,621 Number of extensions: 648 Number of successful extensions: 61 Number of sequences better than 10000.0: 61 Number of HSP's gapped: 61 Number of HSP's successfully gapped: 61 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.3 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |