Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_001013433 20 509 NP_060785 20 509 NP_361014 20 509 NP_003621 17 3301 XP_006710739 17 3301 XP_005270979 17 3301 NP_056972 17 3301 NP_001243092 16 5631 NP_001243095 16 5631 NP_001157 16 5631 NP_001750 16 5631 NP_031382 16 5631 XP_005253870 16 5631 XP_005250289 16 5631 NP_056171 16 7355 NP_874365 16 7355 NP_001165907 16 7355 NP_000284 16 7355 NP_002628 16 7355 NP_001027005 16 7355 NP_000283 16 7355 NP_001116142 16 7355 NP_001191102 16 7355 NP_001364 16 7355 NP_001243779 16 7355 NP_596869 16 7355 NP_733827 16 7355 NP_001028750 16 7355 NP_037389 16 7355 XP_006724724 16 7355 XP_005274607 16 7355 XP_005274605 16 7355 XP_006724560 16 7355 XP_006724559 16 7355 XP_005256041 16 7355 XP_005256040 16 7355 XP_006712787 16 7355 XP_006712786 16 7355 XP_006711798 16 7355 NP_001254479 16 7355 NP_000065 15 9605 NP_598375 15 9605 NP_056993 15 9605 NP_001119580 15 9605 NP_000330 15 9605 NP_001119579 15 9605 NP_694539 15 9605 NP_001180404 15 9605 NP_005151 15 9605 NP_001129101 15 9605 XP_006724221 15 9605 XP_005256176 15 9605 XP_005262773 15 9605 XP_006714140 15 9605 XP_005262771 15 9605 XP_005262770 15 9605 XP_005262769 15 9605 XP_005262768 15 9605 NP_065172 15 9605>NP_001013433 Length = 589 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 FIQNLVTLE 9 FI+NLVTLE Sbjct: 538 FIRNLVTLE 546>NP_060785 Length = 627 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 FIQNLVTLE 9 FI+NLVTLE Sbjct: 576 FIRNLVTLE 584>NP_361014 Length = 707 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 FIQNLVTLE 9 FI+NLVTLE Sbjct: 656 FIRNLVTLE 664>NP_003621 Length = 373 Score = 16.9 bits (32), Expect = 3301 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 FIQNLVTLE 9 F+Q+L+T+E Sbjct: 344 FVQDLLTME 352>XP_006710739 Length = 560 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 IQNLVTLE 9 IQN++TLE Sbjct: 138 IQNIMTLE 145>XP_005270979 Length = 728 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 IQNLVTLE 9 IQN++TLE Sbjct: 138 IQNIMTLE 145>NP_056972 Length = 728 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 IQNLVTLE 9 IQN++TLE Sbjct: 138 IQNIMTLE 145>NP_001243092 Length = 618 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 FIQNLVT 7 FIQNLV+ Sbjct: 112 FIQNLVS 118>NP_001243095 Length = 569 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 FIQNLVT 7 FIQNLV+ Sbjct: 63 FIQNLVS 69>NP_001157 Length = 618 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 FIQNLVT 7 FIQNLV+ Sbjct: 112 FIQNLVS 118>NP_001750 Length = 289 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 IQNLVTLE 9 +QNL+T+E Sbjct: 27 LQNLLTIE 34>NP_031382 Length = 1761 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 FIQNLVTL 8 +IQ+LVTL Sbjct: 216 YIQDLVTL 223>XP_005253870 Length = 217 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 IQNLVTLE 9 +QNL+T+E Sbjct: 27 LQNLLTIE 34>XP_005250289 Length = 1761 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 FIQNLVTL 8 +IQ+LVTL Sbjct: 216 YIQDLVTL 223>NP_056171 Length = 1630 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 IQNLVTLE 9 + NLVTLE Sbjct: 150 LANLVTLE 157>NP_874365 Length = 1655 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 IQNLVTLE 9 + NLVTLE Sbjct: 150 LANLVTLE 157>NP_001165907 Length = 1151 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 FIQNLV 6 FIQNLV Sbjct: 164 FIQNLV 169>NP_000284 Length = 1093 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 FIQNLV 6 FIQNLV Sbjct: 201 FIQNLV 206>NP_002628 Length = 1223 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 FIQNLV 6 FIQNLV Sbjct: 164 FIQNLV 169>NP_001027005 Length = 1086 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 FIQNLV 6 FIQNLV Sbjct: 194 FIQNLV 199>NP_000283 Length = 1235 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 FIQNLV 6 FIQNLV Sbjct: 164 FIQNLV 169>NP_001116142 Length = 1210 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 FIQNLV 6 FIQNLV Sbjct: 164 FIQNLV 169>NP_001191102 Length = 496 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 FIQNLV 6 FIQNLV Sbjct: 97 FIQNLV 102>NP_001364 Length = 4515 Score = 15.8 bits (29), Expect = 7355 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 FIQNLVTLE 9 FI+NL+ ++ Sbjct: 4118 FIENLIAMQ 4126>NP_001243779 Length = 34350 Score = 15.8 bits (29), Expect = 7355 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 FIQNLVTLE 9 F++N+ TL+ Sbjct: 6588 FVENVATLQ 6596>NP_596869 Length = 33423 Score = 15.8 bits (29), Expect = 7355 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 FIQNLVTLE 9 F++N+ TL+ Sbjct: 5661 FVENVATLQ 5669>NP_733827 Length = 464 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 FIQNLV 6 FIQNLV Sbjct: 97 FIQNLV 102>NP_001028750 Length = 496 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 FIQNLV 6 FIQNLV Sbjct: 97 FIQNLV 102>NP_037389 Length = 496 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 FIQNLV 6 FIQNLV Sbjct: 97 FIQNLV 102>XP_006724724 Length = 1164 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 FIQNLV 6 FIQNLV Sbjct: 164 FIQNLV 169>XP_005274607 Length = 1207 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 FIQNLV 6 FIQNLV Sbjct: 164 FIQNLV 169>XP_005274605 Length = 1217 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 FIQNLV 6 FIQNLV Sbjct: 164 FIQNLV 169>XP_006724560 Length = 1225 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 FIQNLV 6 FIQNLV Sbjct: 164 FIQNLV 169>XP_006724559 Length = 1243 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 FIQNLV 6 FIQNLV Sbjct: 164 FIQNLV 169>XP_005256041 Length = 1086 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 FIQNLV 6 FIQNLV Sbjct: 194 FIQNLV 199>XP_005256040 Length = 1093 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 FIQNLV 6 FIQNLV Sbjct: 201 FIQNLV 206>XP_006712787 Length = 33978 Score = 15.8 bits (29), Expect = 7355 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 FIQNLVTLE 9 F++N+ TL+ Sbjct: 6589 FVENVATLQ 6597>XP_006712786 Length = 35484 Score = 15.8 bits (29), Expect = 7355 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 FIQNLVTLE 9 F++N+ TL+ Sbjct: 6589 FVENVATLQ 6597>XP_006711798 Length = 4586 Score = 15.8 bits (29), Expect = 7355 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 FIQNLVTLE 9 FI+NL+ ++ Sbjct: 4189 FIENLIAMQ 4197>NP_001254479 Length = 35991 Score = 15.8 bits (29), Expect = 7355 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 FIQNLVTLE 9 F++N+ TL+ Sbjct: 6905 FVENVATLQ 6913>NP_000065 Length = 261 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 NLVTLE 9 NLVTLE Sbjct: 151 NLVTLE 156>NP_598375 Length = 1101 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 FIQNLVT 7 +IQNL+T Sbjct: 963 YIQNLLT 969>NP_056993 Length = 2371 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 NLVTLE 9 NLVTLE Sbjct: 884 NLVTLE 889>NP_001119580 Length = 1021 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 FIQNLV 6 F+QNLV Sbjct: 325 FVQNLV 330>NP_000330 Length = 1030 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 FIQNLV 6 F+QNLV Sbjct: 325 FVQNLV 330>NP_001119579 Length = 1029 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 FIQNLV 6 F+QNLV Sbjct: 324 FVQNLV 329>NP_694539 Length = 769 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 FIQNLVT 7 F+Q+LVT Sbjct: 262 FVQDLVT 268>NP_001180404 Length = 738 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 FIQNLVT 7 F+Q+LVT Sbjct: 262 FVQDLVT 268>NP_005151 Length = 688 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 QNLVTLE 9 QNL+T+E Sbjct: 598 QNLLTME 604>NP_001129101 Length = 780 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 FIQNLVT 7 F+Q+LVT Sbjct: 262 FVQDLVT 268>XP_006724221 Length = 575 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 QNLVTLE 9 QNL+T+E Sbjct: 485 QNLLTME 491>XP_005256176 Length = 1020 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 FIQNLV 6 F+QNLV Sbjct: 324 FVQNLV 329>XP_005262773 Length = 557 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 FIQNLVT 7 +IQNL+T Sbjct: 419 YIQNLLT 425>XP_006714140 Length = 729 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 FIQNLVT 7 +IQNL+T Sbjct: 591 YIQNLLT 597>XP_005262771 Length = 995 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 FIQNLVT 7 +IQNL+T Sbjct: 857 YIQNLLT 863>XP_005262770 Length = 995 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 FIQNLVT 7 +IQNL+T Sbjct: 857 YIQNLLT 863>XP_005262769 Length = 1034 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 FIQNLVT 7 +IQNL+T Sbjct: 896 YIQNLLT 902>XP_005262768 Length = 1064 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 FIQNLVT 7 +IQNL+T Sbjct: 926 YIQNLLT 932>NP_065172 Length = 476 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 QNLVTLE 9 +N+VTLE Sbjct: 78 ENIVTLE 84Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.330 0.146 0.376 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 359,438 Number of extensions: 648 Number of successful extensions: 59 Number of sequences better than 10000.0: 59 Number of HSP's gapped: 59 Number of HSP's successfully gapped: 59 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.1 bits) S2: 28 (15.4 bits)
|
CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |