Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_000042 18 1135 XP_006718907 18 1135 XP_006718906 18 1135 XP_005271619 18 1135 XP_005271618 18 1135 NP_055192 17 2528 NP_001123359 17 2528 XP_006720708 17 2528 XP_006720707 17 2528 NP_997716 16 7355 NP_001130015 16 7355 NP_001275648 16 7355 NP_001275647 16 7355 NP_001275649 16 7355 NP_003143 16 7355 NP_803879 16 7355 NP_803881 16 7355 NP_001258992 16 7355 NP_110428 16 7355 NP_001229291 16 7355 NP_001258991 16 7355 NP_001092270 16 7355 NP_001258990 16 7355 XP_006726908 16 7355 XP_005276770 16 7355 XP_006724671 16 7355 XP_006724670 16 7355 XP_005257681 16 7355 NP_000731 15 9605 NP_001107578 15 9605 NP_001245271 15 9605 NP_001245269 15 9605 NP_689582 15 9605 NP_001245270 15 9605 NP_001245272 15 9605 NP_001077362 15 9605 XP_005273091 15 9605 XP_005273090 15 9605 XP_006711795 15 9605 XP_005273089 15 9605 XP_005270500 15 9605 XP_005270499 15 9605 XP_005270498 15 9605 XP_005270497 15 9605>NP_000042 Length = 3056 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 FIKRANRRA 9 FIK ANRRA Sbjct: 104 FIKCANRRA 112>XP_006718907 Length = 3050 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 FIKRANRRA 9 FIK ANRRA Sbjct: 104 FIKCANRRA 112>XP_006718906 Length = 3056 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 FIKRANRRA 9 FIK ANRRA Sbjct: 104 FIKCANRRA 112>XP_005271619 Length = 3056 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 FIKRANRRA 9 FIK ANRRA Sbjct: 104 FIKCANRRA 112>XP_005271618 Length = 3056 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 FIKRANRRA 9 FIK ANRRA Sbjct: 104 FIKCANRRA 112>NP_055192 Length = 621 Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 FIKRANRRA 9 F+KR NR A Sbjct: 38 FVKRRNRNA 46>NP_001123359 Length = 568 Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 FIKRANRRA 9 F+KR NR A Sbjct: 38 FVKRRNRNA 46>XP_006720708 Length = 367 Score = 17.3 bits (33), Expect = 2528 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 IKRANRRA 9 ++RANRRA Sbjct: 63 VQRANRRA 70>XP_006720707 Length = 445 Score = 17.3 bits (33), Expect = 2528 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 IKRANRRA 9 ++RANRRA Sbjct: 63 VQRANRRA 70>NP_997716 Length = 227 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 IKRANR 7 IKRANR Sbjct: 64 IKRANR 69>NP_001130015 Length = 179 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 IKRANR 7 IKRANR Sbjct: 16 IKRANR 21>NP_001275648 Length = 764 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 IKRANRR 8 IKRA+RR Sbjct: 394 IKRADRR 400>NP_001275647 Length = 794 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 IKRANRR 8 IKRA+RR Sbjct: 424 IKRADRR 430>NP_001275649 Length = 763 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 IKRANRR 8 IKRA+RR Sbjct: 424 IKRADRR 430>NP_003143 Length = 794 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 IKRANRR 8 IKRA+RR Sbjct: 424 IKRADRR 430>NP_803879 Length = 741 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 RANRRA 9 RANRRA Sbjct: 689 RANRRA 694>NP_803881 Length = 739 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 RANRRA 9 RANRRA Sbjct: 689 RANRRA 694>NP_001258992 Length = 741 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 RANRRA 9 RANRRA Sbjct: 689 RANRRA 694>NP_110428 Length = 741 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 RANRRA 9 RANRRA Sbjct: 689 RANRRA 694>NP_001229291 Length = 757 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 RANRRA 9 RANRRA Sbjct: 705 RANRRA 710>NP_001258991 Length = 741 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 RANRRA 9 RANRRA Sbjct: 689 RANRRA 694>NP_001092270 Length = 739 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 RANRRA 9 RANRRA Sbjct: 689 RANRRA 694>NP_001258990 Length = 757 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 RANRRA 9 RANRRA Sbjct: 705 RANRRA 710>XP_006726908 Length = 185 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 RANRRA 9 RANRRA Sbjct: 135 RANRRA 140>XP_005276770 Length = 187 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 RANRRA 9 RANRRA Sbjct: 135 RANRRA 140>XP_006724671 Length = 741 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 RANRRA 9 RANRRA Sbjct: 689 RANRRA 694>XP_006724670 Length = 741 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 RANRRA 9 RANRRA Sbjct: 689 RANRRA 694>XP_005257681 Length = 761 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 IKRANRR 8 IKRA+RR Sbjct: 424 IKRADRR 430>NP_000731 Length = 590 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 IKRANRR 8 +KR+NRR Sbjct: 300 MKRSNRR 306>NP_001107578 Length = 653 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 1 FIKRANR 7 F+KR+N+ Sbjct: 621 FVKRSNK 627>NP_001245271 Length = 617 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 1 FIKRANR 7 F+KR+N+ Sbjct: 585 FVKRSNK 591>NP_001245269 Length = 652 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 1 FIKRANR 7 F+KR+N+ Sbjct: 620 FVKRSNK 626>NP_689582 Length = 605 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 1 FIKRANR 7 F+KR+N+ Sbjct: 573 FVKRSNK 579>NP_001245270 Length = 620 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 1 FIKRANR 7 F+KR+N+ Sbjct: 588 FVKRSNK 594>NP_001245272 Length = 585 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 1 FIKRANR 7 F+KR+N+ Sbjct: 553 FVKRSNK 559>NP_001077362 Length = 797 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 IKRANR 7 +KRANR Sbjct: 365 VKRANR 370>XP_005273091 Length = 590 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 IKRANRR 8 +KR+NRR Sbjct: 300 MKRSNRR 306>XP_005273090 Length = 590 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 IKRANRR 8 +KR+NRR Sbjct: 300 MKRSNRR 306>XP_006711795 Length = 590 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 IKRANRR 8 +KR+NRR Sbjct: 300 MKRSNRR 306>XP_005273089 Length = 590 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 IKRANRR 8 +KR+NRR Sbjct: 300 MKRSNRR 306>XP_005270500 Length = 573 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 1 FIKRANR 7 F+KR+N+ Sbjct: 541 FVKRSNK 547>XP_005270499 Length = 574 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 1 FIKRANR 7 F+KR+N+ Sbjct: 542 FVKRSNK 548>XP_005270498 Length = 605 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 1 FIKRANR 7 F+KR+N+ Sbjct: 573 FVKRSNK 579>XP_005270497 Length = 621 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 1 FIKRANR 7 F+KR+N+ Sbjct: 589 FVKRSNK 595Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.343 0.142 0.395 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 346,018 Number of extensions: 530 Number of successful extensions: 44 Number of sequences better than 10000.0: 44 Number of HSP's gapped: 44 Number of HSP's successfully gapped: 44 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.7 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |