Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_004976 20 509 NP_203524 20 509 NP_002515 20 509 XP_006719132 20 509 NP_853510 19 665 NP_789765 18 1135 NP_001123914 18 1135 NP_005334 18 1135 XP_006725199 18 1135 XP_006718280 18 1135 NP_005393 18 1482 NP_002872 18 1482 XP_006715826 18 1482 XP_006715825 18 1482 XP_005263786 18 1482 XP_005263785 18 1482 XP_005263784 18 1482 XP_005263781 18 1482 NP_060680 17 2528 NP_001180461 17 3301 NP_689517 17 3301 NP_001361 17 3301 XP_006712019 17 3301 NP_065802 17 4312 NP_001138551 17 4312 NP_001002858 16 5631 NP_001129487 16 5631 NP_004030 16 5631 NP_001002857 16 5631 NP_001033794 16 7355 NP_001138501 15 9605 NP_065792 15 9605 NP_064502 15 9605 XP_006722388 15 9605 XP_005255224 15 9605 XP_006721087 15 9605 XP_006720993 15 9605 XP_005247726 15 9605 XP_005247725 15 9605 XP_005247724 15 9605 NP_777584 15 9605>NP_004976 Length = 188 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 FIETSVKTR 9 FIETS KTR Sbjct: 141 FIETSAKTR 149>NP_203524 Length = 189 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 FIETSVKTR 9 FIETS KTR Sbjct: 141 FIETSAKTR 149>NP_002515 Length = 189 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 FIETSVKTR 9 FIETS KTR Sbjct: 141 FIETSAKTR 149>XP_006719132 Length = 189 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 FIETSVKTR 9 FIETS KTR Sbjct: 141 FIETSAKTR 149>NP_853510 Length = 233 Score = 19.2 bits (38), Expect = 665 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 FIETSVKTR 9 F+ETS KTR Sbjct: 177 FVETSAKTR 185>NP_789765 Length = 170 Score = 18.5 bits (36), Expect = 1135 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 FIETSVKTR 9 +IETS KTR Sbjct: 141 YIETSAKTR 149>NP_001123914 Length = 189 Score = 18.5 bits (36), Expect = 1135 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 FIETSVKTR 9 +IETS KTR Sbjct: 141 YIETSAKTR 149>NP_005334 Length = 189 Score = 18.5 bits (36), Expect = 1135 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 FIETSVKTR 9 +IETS KTR Sbjct: 141 YIETSAKTR 149>XP_006725199 Length = 170 Score = 18.5 bits (36), Expect = 1135 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 FIETSVKTR 9 +IETS KTR Sbjct: 141 YIETSAKTR 149>XP_006718280 Length = 170 Score = 18.5 bits (36), Expect = 1135 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 FIETSVKTR 9 +IETS KTR Sbjct: 141 YIETSAKTR 149>NP_005393 Length = 206 Score = 18.1 bits (35), Expect = 1482 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 FIETSVKTR 9 ++ETS KTR Sbjct: 153 YVETSAKTR 161>NP_002872 Length = 206 Score = 18.1 bits (35), Expect = 1482 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 FIETSVKTR 9 ++ETS KTR Sbjct: 154 YVETSAKTR 162>XP_006715826 Length = 206 Score = 18.1 bits (35), Expect = 1482 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 FIETSVKTR 9 ++ETS KTR Sbjct: 153 YVETSAKTR 161>XP_006715825 Length = 206 Score = 18.1 bits (35), Expect = 1482 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 FIETSVKTR 9 ++ETS KTR Sbjct: 153 YVETSAKTR 161>XP_005263786 Length = 206 Score = 18.1 bits (35), Expect = 1482 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 FIETSVKTR 9 ++ETS KTR Sbjct: 154 YVETSAKTR 162>XP_005263785 Length = 206 Score = 18.1 bits (35), Expect = 1482 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 FIETSVKTR 9 ++ETS KTR Sbjct: 154 YVETSAKTR 162>XP_005263784 Length = 206 Score = 18.1 bits (35), Expect = 1482 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 FIETSVKTR 9 ++ETS KTR Sbjct: 154 YVETSAKTR 162>XP_005263781 Length = 228 Score = 18.1 bits (35), Expect = 1482 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 FIETSVKTR 9 ++ETS KTR Sbjct: 176 YVETSAKTR 184>NP_060680 Length = 390 Score = 17.3 bits (33), Expect = 2528 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 IETSVKTR 9 IET VKTR Sbjct: 312 IETGVKTR 319>NP_001180461 Length = 218 Score = 16.9 bits (32), Expect = 3301 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 FIETSVK 7 F+ETSVK Sbjct: 155 FVETSVK 161>NP_689517 Length = 105 Score = 16.9 bits (32), Expect = 3301 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 FIETSVK 7 F+ETSVK Sbjct: 42 FVETSVK 48>NP_001361 Length = 4158 Score = 16.9 bits (32), Expect = 3301 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 2 IETSVKT 8 IETSVKT Sbjct: 3330 IETSVKT 3336>XP_006712019 Length = 4158 Score = 16.9 bits (32), Expect = 3301 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 2 IETSVKT 8 IETSVKT Sbjct: 3330 IETSVKT 3336>NP_065802 Length = 657 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 FIETSVKTR 9 F+E S++TR Sbjct: 64 FVENSLRTR 72>NP_001138551 Length = 615 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 FIETSVKTR 9 F+E S++TR Sbjct: 64 FVENSLRTR 72>NP_001002858 Length = 357 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 IETSVKTR 9 IET++KT+ Sbjct: 60 IETAIKTK 67>NP_001129487 Length = 339 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 IETSVKTR 9 IET++KT+ Sbjct: 42 IETAIKTK 49>NP_004030 Length = 339 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 IETSVKTR 9 IET++KT+ Sbjct: 42 IETAIKTK 49>NP_001002857 Length = 339 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 IETSVKTR 9 IET++KT+ Sbjct: 42 IETAIKTK 49>NP_001033794 Length = 731 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 FIETSVK 7 F++TSVK Sbjct: 610 FVDTSVK 616>NP_001138501 Length = 1392 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 ETSVKT 8 ETSVKT Sbjct: 367 ETSVKT 372>NP_065792 Length = 409 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 FIETSVKT 8 F+E+ VKT Sbjct: 145 FLESGVKT 152>NP_064502 Length = 1176 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 ETSVKT 8 ETSVKT Sbjct: 126 ETSVKT 131>XP_006722388 Length = 1511 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 ETSVKT 8 ETSVKT Sbjct: 367 ETSVKT 372>XP_005255224 Length = 308 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 FIETSVKTR 9 F+E+ +KT+ Sbjct: 212 FLESHIKTK 220>XP_006721087 Length = 484 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 FIETSVKTR 9 F+E+ +KT+ Sbjct: 388 FLESHIKTK 396>XP_006720993 Length = 349 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 FIETSVKT 8 F+E S+KT Sbjct: 233 FVEDSLKT 240>XP_005247726 Length = 297 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 FIETSVKT 8 F+E+ VKT Sbjct: 33 FLESGVKT 40>XP_005247725 Length = 297 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 FIETSVKT 8 F+E+ VKT Sbjct: 33 FLESGVKT 40>XP_005247724 Length = 409 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 FIETSVKT 8 F+E+ VKT Sbjct: 145 FLESGVKT 152>NP_777584 Length = 584 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 FIETSVKTR 9 F+E+ +KT+ Sbjct: 488 FLESHIKTK 496Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.321 0.129 0.322 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 297,902 Number of extensions: 342 Number of successful extensions: 41 Number of sequences better than 10000.0: 41 Number of HSP's gapped: 41 Number of HSP's successfully gapped: 41 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.9 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |