Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_000042 20 299 XP_006718907 20 299 XP_006718906 20 299 XP_005271619 20 299 XP_005271618 20 299 NP_036399 18 1935 XP_005258760 18 1935 XP_005258758 18 1935 XP_005258757 18 1935 NP_001123578 18 1935 NP_056197 16 5631 NP_976241 16 5631 NP_998754 16 5631 NP_003794 16 5631 NP_062830 16 5631 XP_005267560 16 5631 XP_005267559 16 5631 XP_005246837 16 5631 XP_005246836 16 5631 XP_006712758 16 5631 XP_005246834 16 5631 NP_004111 16 7355 NP_001243000 16 7355 NP_001164509 16 7355 NP_004034 16 7355 NP_002044 16 7355 NP_689758 16 7355 NP_060754 16 7355 XP_005257603 16 7355 XP_006722058 16 7355 XP_005257602 16 7355 XP_005262833 16 7355 XP_005270801 16 7355 XP_005270800 16 7355 XP_005270799 16 7355 XP_005270798 16 7355 XP_006710637 16 7355 XP_006710636 16 7355 NP_001164510 16 7355 NP_001017921 16 7355 NP_001234919 15 9605 NP_976230 15 9605 NP_001234918 15 9605 NP_001265436 15 9605 NP_001234917 15 9605 NP_000370 15 9605 NP_001138868 15 9605 NP_699160 15 9605 NP_001139131 15 9605 NP_065996 15 9605 NP_064502 15 9605 NP_976231 15 9605 NP_976229 15 9605 NP_078836 15 9605 NP_001008747 15 9605 NP_055646 15 9605 XP_006720211 15 9605 XP_005267707 15 9605 XP_005267706 15 9605 XP_005267705 15 9605 XP_005267704 15 9605 XP_005267703 15 9605 XP_005269208 15 9605 XP_005269207 15 9605 XP_005270063 15 9605 XP_005270062 15 9605 XP_005270061 15 9605 XP_006713495 15 9605 NP_940897 15 9605 NP_848656 15 9605 NP_005921 15 9605 NP_758441 15 9605>NP_000042 Length = 3056 Score = 20.4 bits (41), Expect = 299 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 IELMADIC 9 IELMADIC Sbjct: 346 IELMADIC 353>XP_006718907 Length = 3050 Score = 20.4 bits (41), Expect = 299 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 IELMADIC 9 IELMADIC Sbjct: 346 IELMADIC 353>XP_006718906 Length = 3056 Score = 20.4 bits (41), Expect = 299 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 IELMADIC 9 IELMADIC Sbjct: 346 IELMADIC 353>XP_005271619 Length = 3056 Score = 20.4 bits (41), Expect = 299 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 IELMADIC 9 IELMADIC Sbjct: 346 IELMADIC 353>XP_005271618 Length = 3056 Score = 20.4 bits (41), Expect = 299 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 IELMADIC 9 IELMADIC Sbjct: 346 IELMADIC 353>NP_036399 Length = 359 Score = 17.7 bits (34), Expect = 1935 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 IELMADIC 9 +EL+AD+C Sbjct: 124 LELLADLC 131>XP_005258760 Length = 405 Score = 17.7 bits (34), Expect = 1935 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 IELMADIC 9 +EL+AD+C Sbjct: 170 LELLADLC 177>XP_005258758 Length = 431 Score = 17.7 bits (34), Expect = 1935 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 IELMADIC 9 +EL+AD+C Sbjct: 124 LELLADLC 131>XP_005258757 Length = 431 Score = 17.7 bits (34), Expect = 1935 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 IELMADIC 9 +EL+AD+C Sbjct: 124 LELLADLC 131>NP_001123578 Length = 359 Score = 17.7 bits (34), Expect = 1935 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 IELMADIC 9 +EL+AD+C Sbjct: 124 LELLADLC 131>NP_056197 Length = 2610 Score = 16.2 bits (30), Expect = 5631 Identities = 4/9 (44%), Positives = 7/9 (77%) Query: 1 FIELMADIC 9 +++LM D C Sbjct: 2445 YVDLMFDFC 2453>NP_976241 Length = 644 Score = 16.2 bits (30), Expect = 5631 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 LMADIC 9 LMAD+C Sbjct: 89 LMADLC 94>NP_998754 Length = 1250 Score = 16.2 bits (30), Expect = 5631 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 LMADIC 9 LMAD+C Sbjct: 89 LMADLC 94>NP_003794 Length = 1685 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 FIELMADIC 9 F ELM ++C Sbjct: 1448 FKELMMEVC 1456>NP_062830 Length = 1589 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 FIELMADIC 9 F ELM ++C Sbjct: 1352 FKELMMEVC 1360>XP_005267560 Length = 2563 Score = 16.2 bits (30), Expect = 5631 Identities = 4/9 (44%), Positives = 7/9 (77%) Query: 1 FIELMADIC 9 +++LM D C Sbjct: 2398 YVDLMFDFC 2406>XP_005267559 Length = 2610 Score = 16.2 bits (30), Expect = 5631 Identities = 4/9 (44%), Positives = 7/9 (77%) Query: 1 FIELMADIC 9 +++LM D C Sbjct: 2445 YVDLMFDFC 2453>XP_005246837 Length = 1277 Score = 16.2 bits (30), Expect = 5631 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 LMADIC 9 LMAD+C Sbjct: 89 LMADLC 94>XP_005246836 Length = 1302 Score = 16.2 bits (30), Expect = 5631 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 LMADIC 9 LMAD+C Sbjct: 89 LMADLC 94>XP_006712758 Length = 1302 Score = 16.2 bits (30), Expect = 5631 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 LMADIC 9 LMAD+C Sbjct: 89 LMADLC 94>XP_005246834 Length = 1302 Score = 16.2 bits (30), Expect = 5631 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 LMADIC 9 LMAD+C Sbjct: 89 LMADLC 94>NP_004111 Length = 591 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 FIELMADIC 9 FIE +A+ C Sbjct: 260 FIEQVAEFC 268>NP_001243000 Length = 5207 Score = 15.8 bits (29), Expect = 7355 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 FIELMADIC 9 F++L++ IC Sbjct: 4069 FVDLVSTIC 4077>NP_001164509 Length = 373 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 ELMADIC 9 EL+ DIC Sbjct: 61 ELLLDIC 67>NP_004034 Length = 373 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 ELMADIC 9 EL+ DIC Sbjct: 61 ELLLDIC 67>NP_002044 Length = 592 Score = 15.8 bits (29), Expect = 7355 Identities = 4/9 (44%), Positives = 7/9 (77%) Query: 1 FIELMADIC 9 F++ +AD C Sbjct: 262 FVQQVADFC 270>NP_689758 Length = 473 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 ELMADIC 9 ELMA +C Sbjct: 78 ELMAKVC 84>NP_060754 Length = 595 Score = 15.8 bits (29), Expect = 7355 Identities = 4/9 (44%), Positives = 7/9 (77%) Query: 1 FIELMADIC 9 F++ +AD C Sbjct: 260 FVQQVADFC 268>XP_005257603 Length = 5256 Score = 15.8 bits (29), Expect = 7355 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 FIELMADIC 9 F++L++ IC Sbjct: 4118 FVDLVSTIC 4126>XP_006722058 Length = 5256 Score = 15.8 bits (29), Expect = 7355 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 FIELMADIC 9 F++L++ IC Sbjct: 4118 FVDLVSTIC 4126>XP_005257602 Length = 5256 Score = 15.8 bits (29), Expect = 7355 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 FIELMADIC 9 F++L++ IC Sbjct: 4118 FVDLVSTIC 4126>XP_005262833 Length = 472 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 ELMADIC 9 ELMA +C Sbjct: 78 ELMAKVC 84>XP_005270801 Length = 461 Score = 15.8 bits (29), Expect = 7355 Identities = 4/9 (44%), Positives = 7/9 (77%) Query: 1 FIELMADIC 9 F++ +AD C Sbjct: 126 FVQQVADFC 134>XP_005270800 Length = 516 Score = 15.8 bits (29), Expect = 7355 Identities = 4/9 (44%), Positives = 7/9 (77%) Query: 1 FIELMADIC 9 F++ +AD C Sbjct: 181 FVQQVADFC 189>XP_005270799 Length = 516 Score = 15.8 bits (29), Expect = 7355 Identities = 4/9 (44%), Positives = 7/9 (77%) Query: 1 FIELMADIC 9 F++ +AD C Sbjct: 181 FVQQVADFC 189>XP_005270798 Length = 544 Score = 15.8 bits (29), Expect = 7355 Identities = 4/9 (44%), Positives = 7/9 (77%) Query: 1 FIELMADIC 9 F++ +AD C Sbjct: 260 FVQQVADFC 268>XP_006710637 Length = 568 Score = 15.8 bits (29), Expect = 7355 Identities = 4/9 (44%), Positives = 7/9 (77%) Query: 1 FIELMADIC 9 F++ +AD C Sbjct: 260 FVQQVADFC 268>XP_006710636 Length = 458 Score = 15.8 bits (29), Expect = 7355 Identities = 4/9 (44%), Positives = 7/9 (77%) Query: 1 FIELMADIC 9 F++ +AD C Sbjct: 128 FVQQVADFC 136>NP_001164510 Length = 298 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 ELMADIC 9 EL+ DIC Sbjct: 61 ELLLDIC 67>NP_001017921 Length = 169 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 ELMADIC 9 EL+ DIC Sbjct: 102 ELLQDIC 108>NP_001234919 Length = 729 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 ELMADI 8 ELMADI Sbjct: 89 ELMADI 94>NP_976230 Length = 761 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 ELMADI 8 ELMADI Sbjct: 164 ELMADI 169>NP_001234918 Length = 809 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 ELMADI 8 ELMADI Sbjct: 169 ELMADI 174>NP_001265436 Length = 777 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 ELMADI 8 ELMADI Sbjct: 165 ELMADI 170>NP_001234917 Length = 732 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 ELMADI 8 ELMADI Sbjct: 135 ELMADI 140>NP_000370 Length = 1333 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 6/7 (85%) Query: 3 ELMADIC 9 EL+ D+C Sbjct: 481 ELLQDVC 487>NP_001138868 Length = 751 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 FIELMADIC 9 F+E+M IC Sbjct: 179 FLEMMWRIC 187>NP_699160 Length = 802 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 FIELMADIC 9 F+E+M IC Sbjct: 179 FLEMMWRIC 187>NP_001139131 Length = 777 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 ELMADI 8 ELMADI Sbjct: 165 ELMADI 170>NP_065996 Length = 3184 Score = 15.4 bits (28), Expect = 9605 Identities = 3/9 (33%), Positives = 8/9 (88%) Query: 1 FIELMADIC 9 F++++ +IC Sbjct: 195 FVQMLLNIC 203>NP_064502 Length = 1176 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 FIELMAD 7 F+E MAD Sbjct: 755 FVEAMAD 761>NP_976231 Length = 775 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 ELMADI 8 ELMADI Sbjct: 135 ELMADI 140>NP_976229 Length = 792 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 ELMADI 8 ELMADI Sbjct: 152 ELMADI 157>NP_078836 Length = 686 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 FIELMADIC 9 F+E M +IC Sbjct: 105 FVEGMLNIC 113>NP_001008747 Length = 777 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 ELMADI 8 ELMADI Sbjct: 165 ELMADI 170>NP_055646 Length = 2925 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 FIELMADI 8 F+E+ ADI Sbjct: 509 FLEIKADI 516>XP_006720211 Length = 775 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 ELMADI 8 ELMADI Sbjct: 135 ELMADI 140>XP_005267707 Length = 780 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 ELMADI 8 ELMADI Sbjct: 140 ELMADI 145>XP_005267706 Length = 797 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 ELMADI 8 ELMADI Sbjct: 157 ELMADI 162>XP_005267705 Length = 798 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 ELMADI 8 ELMADI Sbjct: 158 ELMADI 163>XP_005267704 Length = 799 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 ELMADI 8 ELMADI Sbjct: 159 ELMADI 164>XP_005267703 Length = 803 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 ELMADI 8 ELMADI Sbjct: 163 ELMADI 168>XP_005269208 Length = 455 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 FIELMADIC 9 F+E M +IC Sbjct: 105 FVEGMLNIC 113>XP_005269207 Length = 685 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 FIELMADIC 9 F+E M +IC Sbjct: 104 FVEGMLNIC 112>XP_005270063 Length = 2005 Score = 15.4 bits (28), Expect = 9605 Identities = 3/9 (33%), Positives = 8/9 (88%) Query: 1 FIELMADIC 9 F++++ +IC Sbjct: 195 FVQMLLNIC 203>XP_005270062 Length = 3184 Score = 15.4 bits (28), Expect = 9605 Identities = 3/9 (33%), Positives = 8/9 (88%) Query: 1 FIELMADIC 9 F++++ +IC Sbjct: 195 FVQMLLNIC 203>XP_005270061 Length = 3184 Score = 15.4 bits (28), Expect = 9605 Identities = 3/9 (33%), Positives = 8/9 (88%) Query: 1 FIELMADIC 9 F++++ +IC Sbjct: 195 FVQMLLNIC 203>XP_006713495 Length = 2969 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 FIELMADI 8 F+E+ ADI Sbjct: 553 FLEIKADI 560>NP_940897 Length = 777 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 ELMADI 8 ELMADI Sbjct: 165 ELMADI 170>NP_848656 Length = 777 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 ELMADI 8 ELMADI Sbjct: 165 ELMADI 170>NP_005921 Length = 804 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 ELMADI 8 ELMADI Sbjct: 164 ELMADI 169>NP_758441 Length = 745 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 ELMADI 8 ELMADI Sbjct: 134 ELMADI 139Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.347 0.155 0.507 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 410,901 Number of extensions: 989 Number of successful extensions: 72 Number of sequences better than 10000.0: 72 Number of HSP's gapped: 72 Number of HSP's successfully gapped: 72 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 14 ( 7.0 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.7 bits) S2: 28 (15.4 bits)
|
CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |