Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value XP_005270847 17 4312 NP_001516 17 4312 NP_001120727 16 7355 NP_631915 16 7355 NP_055640 16 7355 XP_006726254 16 7355 XP_006726253 16 7355 XP_006726252 16 7355 XP_006726214 16 7355 XP_006726213 16 7355 XP_006726212 16 7355 XP_006726371 16 7355 XP_006726370 16 7355 XP_006726116 16 7355 XP_006726115 16 7355 XP_006726114 16 7355 XP_006726017 16 7355 XP_006726016 16 7355 XP_006726015 16 7355 XP_006725929 16 7355 XP_006725928 16 7355 XP_006725927 16 7355 XP_006725828 16 7355 XP_006725827 16 7355 XP_006725826 16 7355 XP_006725701 16 7355 XP_006725700 16 7355 XP_006725699 16 7355 XP_006726334 16 7355 XP_006726333 16 7355 XP_006726332 16 7355 XP_006723139 16 7355 XP_006723138 16 7355 XP_006723137 16 7355 NP_059110 15 9605 NP_002411 15 9605 NP_001238953 15 9605 NP_001238949 15 9605 NP_079247 15 9605 NP_001007472 15 9605 NP_066003 15 9605 NP_996830 15 9605 NP_996829 15 9605 NP_996828 15 9605 NP_996827 15 9605 XP_005252275 15 9605 XP_006711533 15 9605 XP_005245422 15 9605 NP_065821 15 9605>XP_005270847 Length = 283 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 FGILRQAS 8 FG+ RQAS Sbjct: 238 FGMFRQAS 245>NP_001516 Length = 425 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 FGILRQAS 8 FG+ RQAS Sbjct: 324 FGMFRQAS 331>NP_001120727 Length = 1037 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 FGILRQ 6 FG+LRQ Sbjct: 980 FGVLRQ 985>NP_631915 Length = 1009 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 FGILRQ 6 FG+LRQ Sbjct: 952 FGVLRQ 957>NP_055640 Length = 2271 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 FGILRQ 6 FG+LRQ Sbjct: 1789 FGVLRQ 1794>XP_006726254 Length = 1037 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 FGILRQ 6 FG+LRQ Sbjct: 980 FGVLRQ 985>XP_006726253 Length = 1037 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 FGILRQ 6 FG+LRQ Sbjct: 980 FGVLRQ 985>XP_006726252 Length = 1064 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 FGILRQ 6 FG+LRQ Sbjct: 1007 FGVLRQ 1012>XP_006726214 Length = 1037 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 FGILRQ 6 FG+LRQ Sbjct: 980 FGVLRQ 985>XP_006726213 Length = 1037 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 FGILRQ 6 FG+LRQ Sbjct: 980 FGVLRQ 985>XP_006726212 Length = 1064 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 FGILRQ 6 FG+LRQ Sbjct: 1007 FGVLRQ 1012>XP_006726371 Length = 1037 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 FGILRQ 6 FG+LRQ Sbjct: 980 FGVLRQ 985>XP_006726370 Length = 1037 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 FGILRQ 6 FG+LRQ Sbjct: 980 FGVLRQ 985>XP_006726116 Length = 1037 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 FGILRQ 6 FG+LRQ Sbjct: 980 FGVLRQ 985>XP_006726115 Length = 1037 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 FGILRQ 6 FG+LRQ Sbjct: 980 FGVLRQ 985>XP_006726114 Length = 1064 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 FGILRQ 6 FG+LRQ Sbjct: 1007 FGVLRQ 1012>XP_006726017 Length = 1037 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 FGILRQ 6 FG+LRQ Sbjct: 980 FGVLRQ 985>XP_006726016 Length = 1037 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 FGILRQ 6 FG+LRQ Sbjct: 980 FGVLRQ 985>XP_006726015 Length = 1064 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 FGILRQ 6 FG+LRQ Sbjct: 1007 FGVLRQ 1012>XP_006725929 Length = 1037 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 FGILRQ 6 FG+LRQ Sbjct: 980 FGVLRQ 985>XP_006725928 Length = 1037 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 FGILRQ 6 FG+LRQ Sbjct: 980 FGVLRQ 985>XP_006725927 Length = 1064 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 FGILRQ 6 FG+LRQ Sbjct: 1007 FGVLRQ 1012>XP_006725828 Length = 1037 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 FGILRQ 6 FG+LRQ Sbjct: 980 FGVLRQ 985>XP_006725827 Length = 1037 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 FGILRQ 6 FG+LRQ Sbjct: 980 FGVLRQ 985>XP_006725826 Length = 1064 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 FGILRQ 6 FG+LRQ Sbjct: 1007 FGVLRQ 1012>XP_006725701 Length = 1037 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 FGILRQ 6 FG+LRQ Sbjct: 980 FGVLRQ 985>XP_006725700 Length = 1037 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 FGILRQ 6 FG+LRQ Sbjct: 980 FGVLRQ 985>XP_006725699 Length = 1064 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 FGILRQ 6 FG+LRQ Sbjct: 1007 FGVLRQ 1012>XP_006726334 Length = 1037 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 FGILRQ 6 FG+LRQ Sbjct: 980 FGVLRQ 985>XP_006726333 Length = 1037 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 FGILRQ 6 FG+LRQ Sbjct: 980 FGVLRQ 985>XP_006726332 Length = 1064 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 FGILRQ 6 FG+LRQ Sbjct: 1007 FGVLRQ 1012>XP_006723139 Length = 1037 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 FGILRQ 6 FG+LRQ Sbjct: 980 FGVLRQ 985>XP_006723138 Length = 1037 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 FGILRQ 6 FG+LRQ Sbjct: 980 FGVLRQ 985>XP_006723137 Length = 1064 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 FGILRQ 6 FG+LRQ Sbjct: 1007 FGVLRQ 1012>NP_059110 Length = 372 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 FGILRQ 6 FG+LRQ Sbjct: 5 FGLLRQ 10>NP_002411 Length = 1603 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 FGILRQA 7 FG+ RQA Sbjct: 980 FGVARQA 986>NP_001238953 Length = 1625 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 FGILRQA 7 FG+ RQA Sbjct: 1002 FGVARQA 1008>NP_001238949 Length = 1642 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 FGILRQA 7 FG+ RQA Sbjct: 1019 FGVARQA 1025>NP_079247 Length = 1566 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 FGILRQA 7 FG+ RQA Sbjct: 881 FGVARQA 887>NP_001007472 Length = 1707 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 FGILRQA 7 FG+ RQA Sbjct: 1022 FGVARQA 1028>NP_066003 Length = 1554 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 FGILRQA 7 FG+ RQA Sbjct: 869 FGVARQA 875>NP_996830 Length = 1569 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 FGILRQA 7 FG+ RQA Sbjct: 884 FGVARQA 890>NP_996829 Length = 1579 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 FGILRQA 7 FG+ RQA Sbjct: 894 FGVARQA 900>NP_996828 Length = 1556 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 FGILRQA 7 FG+ RQA Sbjct: 871 FGVARQA 877>NP_996827 Length = 1544 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 FGILRQA 7 FG+ RQA Sbjct: 859 FGVARQA 865>XP_005252275 Length = 1734 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 FGILRQA 7 FG+ RQA Sbjct: 1049 FGVARQA 1055>XP_006711533 Length = 747 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 FGILRQAS 8 +GILR+ S Sbjct: 319 YGILREGS 326>XP_005245422 Length = 1203 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 FGILRQAS 8 +GILR+ S Sbjct: 319 YGILREGS 326>NP_065821 Length = 1203 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 FGILRQAS 8 +GILR+ S Sbjct: 319 YGILREGS 326Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.337 0.147 0.396 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 348,853 Number of extensions: 326 Number of successful extensions: 49 Number of sequences better than 10000.0: 49 Number of HSP's gapped: 49 Number of HSP's successfully gapped: 49 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.4 bits) S2: 28 (15.4 bits)
CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |