Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_001276866 20 390 NP_004439 20 390 NP_001276865 20 390 NP_001005862 20 390 XP_005257197 20 390 XP_006721828 20 390 NP_000143 17 3301 NP_001073271 17 3301 NP_001073272 17 3301 XP_005257251 17 3301 XP_005257250 17 3301 NP_001268678 17 4312 NP_079440 17 4312 NP_001268677 17 4312 XP_005271543 17 4312 XP_005271542 17 4312 XP_005271541 17 4312 XP_005271539 17 4312 XP_005271538 17 4312 NP_001036189 16 5631 XP_006710508 16 5631 XP_006710507 16 5631 NP_689910 16 5631 NP_000284 15 9605 NP_001027005 15 9605 NP_001137432 15 9605 NP_001275988 15 9605 NP_001275990 15 9605 NP_001275987 15 9605 NP_112168 15 9605 NP_001137431 15 9605 XP_005256041 15 9605 XP_005256040 15 9605 XP_006718343 15 9605 XP_006718342 15 9605 XP_006718341 15 9605 XP_005264347 15 9605 XP_005264346 15 9605 XP_005264345 15 9605 XP_005264344 15 9605>NP_001276866 Length = 1055 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 FGILIKRQQ 9 FGILIKR+Q Sbjct: 671 FGILIKRRQ 679>NP_004439 Length = 1255 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 FGILIKRQQ 9 FGILIKR+Q Sbjct: 671 FGILIKRRQ 679>NP_001276865 Length = 1240 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 FGILIKRQQ 9 FGILIKR+Q Sbjct: 656 FGILIKRRQ 664>NP_001005862 Length = 1225 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 FGILIKRQQ 9 FGILIKR+Q Sbjct: 641 FGILIKRRQ 649>XP_005257197 Length = 1225 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 FGILIKRQQ 9 FGILIKR+Q Sbjct: 641 FGILIKRRQ 649>XP_006721828 Length = 1336 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 FGILIKRQQ 9 FGILIKR+Q Sbjct: 752 FGILIKRRQ 760>NP_000143 Length = 952 Score = 16.9 bits (32), Expect = 3301 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 FGILIKRQ 8 FG++++RQ Sbjct: 218 FGVIVRRQ 225>NP_001073271 Length = 952 Score = 16.9 bits (32), Expect = 3301 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 FGILIKRQ 8 FG++++RQ Sbjct: 218 FGVIVRRQ 225>NP_001073272 Length = 952 Score = 16.9 bits (32), Expect = 3301 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 FGILIKRQ 8 FG++++RQ Sbjct: 218 FGVIVRRQ 225>XP_005257251 Length = 952 Score = 16.9 bits (32), Expect = 3301 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 FGILIKRQ 8 FG++++RQ Sbjct: 218 FGVIVRRQ 225>XP_005257250 Length = 952 Score = 16.9 bits (32), Expect = 3301 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 FGILIKRQ 8 FG++++RQ Sbjct: 218 FGVIVRRQ 225>NP_001268678 Length = 1261 Score = 16.5 bits (31), Expect = 4312 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 FGILIKRQQ 9 F LIKRQQ Sbjct: 932 FAQLIKRQQ 940>NP_079440 Length = 1321 Score = 16.5 bits (31), Expect = 4312 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 FGILIKRQQ 9 F LIKRQQ Sbjct: 992 FAQLIKRQQ 1000>NP_001268677 Length = 1102 Score = 16.5 bits (31), Expect = 4312 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 FGILIKRQQ 9 F LIKRQQ Sbjct: 773 FAQLIKRQQ 781>XP_005271543 Length = 722 Score = 16.5 bits (31), Expect = 4312 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 FGILIKRQQ 9 F LIKRQQ Sbjct: 393 FAQLIKRQQ 401>XP_005271542 Length = 770 Score = 16.5 bits (31), Expect = 4312 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 FGILIKRQQ 9 F LIKRQQ Sbjct: 441 FAQLIKRQQ 449>XP_005271541 Length = 1203 Score = 16.5 bits (31), Expect = 4312 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 FGILIKRQQ 9 F LIKRQQ Sbjct: 874 FAQLIKRQQ 882>XP_005271539 Length = 1263 Score = 16.5 bits (31), Expect = 4312 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 FGILIKRQQ 9 F LIKRQQ Sbjct: 934 FAQLIKRQQ 942>XP_005271538 Length = 1369 Score = 16.5 bits (31), Expect = 4312 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 FGILIKRQQ 9 F LIKRQQ Sbjct: 1040 FAQLIKRQQ 1048>NP_001036189 Length = 538 Score = 16.2 bits (30), Expect = 5631 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 GILIKRQQ 9 GILI RQQ Sbjct: 378 GILICRQQ 385>XP_006710508 Length = 677 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 GILIKRQ 8 GILIK+Q Sbjct: 663 GILIKKQ 669>XP_006710507 Length = 719 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 GILIKRQ 8 GILIK+Q Sbjct: 705 GILIKKQ 711>NP_689910 Length = 719 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 GILIKRQ 8 GILIK+Q Sbjct: 705 GILIKKQ 711>NP_000284 Length = 1093 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 GILIKRQ 8 GIL+KR+ Sbjct: 745 GILLKRE 751>NP_001027005 Length = 1086 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 GILIKRQ 8 GIL+KR+ Sbjct: 738 GILLKRE 744>NP_001137432 Length = 115 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 GILIKRQ 8 GIL++RQ Sbjct: 13 GILVQRQ 19>NP_001275988 Length = 327 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 FGILIKRQ 8 FG+ +K+Q Sbjct: 79 FGLAVKKQ 86>NP_001275990 Length = 514 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 FGILIKRQ 8 FG+ +K+Q Sbjct: 266 FGLAVKKQ 273>NP_001275987 Length = 473 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 FGILIKRQ 8 FG+ +K+Q Sbjct: 225 FGLAVKKQ 232>NP_112168 Length = 514 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 FGILIKRQ 8 FG+ +K+Q Sbjct: 266 FGLAVKKQ 273>NP_001137431 Length = 194 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 GILIKRQ 8 GIL++RQ Sbjct: 92 GILVQRQ 98>XP_005256041 Length = 1086 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 GILIKRQ 8 GIL+KR+ Sbjct: 738 GILLKRE 744>XP_005256040 Length = 1093 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 GILIKRQ 8 GIL+KR+ Sbjct: 745 GILLKRE 751>XP_006718343 Length = 473 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 FGILIKRQ 8 FG+ +K+Q Sbjct: 225 FGLAVKKQ 232>XP_006718342 Length = 448 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 FGILIKRQ 8 FG+ +K+Q Sbjct: 266 FGLAVKKQ 273>XP_006718341 Length = 473 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 FGILIKRQ 8 FG+ +K+Q Sbjct: 225 FGLAVKKQ 232>XP_005264347 Length = 115 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 GILIKRQ 8 GIL++RQ Sbjct: 13 GILVQRQ 19>XP_005264346 Length = 115 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 GILIKRQ 8 GIL++RQ Sbjct: 13 GILVQRQ 19>XP_005264345 Length = 115 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 GILIKRQ 8 GIL++RQ Sbjct: 13 GILVQRQ 19>XP_005264344 Length = 194 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 GILIKRQ 8 GIL++RQ Sbjct: 92 GILVQRQ 98Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.341 0.158 0.438 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 475,426 Number of extensions: 699 Number of successful extensions: 40 Number of sequences better than 10000.0: 40 Number of HSP's gapped: 40 Number of HSP's successfully gapped: 40 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.4 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |