Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_008835 20 390 NP_001075109 20 390 NP_055394 17 2528 NP_005500 17 2528 NP_001277250 17 2528 XP_006714623 17 2528 XP_005271970 17 2528 XP_005271969 17 2528 XP_005271967 17 2528 XP_005271966 17 2528 NP_115991 16 5631 NP_001025035 16 7355 NP_114092 16 7355 NP_064508 15 9605 NP_808211 15 9605 NP_803545 15 9605 NP_258411 15 9605 NP_005299 15 9605 NP_003703 15 9605 XP_005257845 15 9605 XP_005257844 15 9605 XP_005269765 15 9605 XP_005269764 15 9605 XP_005249598 15 9605 XP_005249596 15 9605 XP_005249594 15 9605 NP_078991 15 9605>NP_008835 Length = 4128 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 FFLESIAMY 9 FFLESIAM+ Sbjct: 1296 FFLESIAMH 1304>NP_001075109 Length = 4097 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 FFLESIAMY 9 FFLESIAM+ Sbjct: 1296 FFLESIAMH 1304>NP_055394 Length = 309 Score = 17.3 bits (33), Expect = 2528 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 FFLESIAM 8 FFLES+A+ Sbjct: 117 FFLESLAL 124>NP_005500 Length = 3027 Score = 17.3 bits (33), Expect = 2528 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 1 FFLESIA 7 FFLESIA Sbjct: 107 FFLESIA 113>NP_001277250 Length = 3048 Score = 17.3 bits (33), Expect = 2528 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 1 FFLESIA 7 FFLESIA Sbjct: 107 FFLESIA 113>XP_006714623 Length = 1625 Score = 17.3 bits (33), Expect = 2528 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 1 FFLESIA 7 FFLESIA Sbjct: 107 FFLESIA 113>XP_005271970 Length = 2931 Score = 17.3 bits (33), Expect = 2528 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 1 FFLESIA 7 FFLESIA Sbjct: 107 FFLESIA 113>XP_005271969 Length = 3020 Score = 17.3 bits (33), Expect = 2528 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 1 FFLESIA 7 FFLESIA Sbjct: 41 FFLESIA 47>XP_005271967 Length = 3065 Score = 17.3 bits (33), Expect = 2528 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 1 FFLESIA 7 FFLESIA Sbjct: 107 FFLESIA 113>XP_005271966 Length = 3086 Score = 17.3 bits (33), Expect = 2528 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 1 FFLESIA 7 FFLESIA Sbjct: 107 FFLESIA 113>NP_115991 Length = 543 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 FFLESIAMY 9 FFL + MY Sbjct: 505 FFLPGVCMY 513>NP_001025035 Length = 1200 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 FFLESIAMY 9 FFL++ A Y Sbjct: 888 FFLQAAAQY 896>NP_114092 Length = 456 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 FLESIAMY 9 FLE +A Y Sbjct: 89 FLEEVAFY 96>NP_064508 Length = 589 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 FFLESIAMY 9 FF+ IA+Y Sbjct: 375 FFINFIAIY 383>NP_808211 Length = 309 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 FFLESIAMY 9 FFL + A+Y Sbjct: 222 FFLVAFALY 230>NP_803545 Length = 232 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 FFLESIAMY 9 FFL + A+Y Sbjct: 145 FFLVAFALY 153>NP_258411 Length = 638 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 FFLESI 6 FFLES+ Sbjct: 613 FFLESV 618>NP_005299 Length = 590 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 FLESIAMY 9 FL+S+A Y Sbjct: 83 FLDSVAEY 90>NP_003703 Length = 288 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 FFLESIAMY 9 FFL + A+Y Sbjct: 201 FFLVAFALY 209>XP_005257845 Length = 400 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 FFLESI 6 FFLES+ Sbjct: 375 FFLESV 380>XP_005257844 Length = 400 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 FFLESI 6 FFLES+ Sbjct: 375 FFLESV 380>XP_005269765 Length = 558 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 FLESIAMY 9 FL+S+A Y Sbjct: 51 FLDSVAEY 58>XP_005269764 Length = 560 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 FLESIAMY 9 FL+S+A Y Sbjct: 83 FLDSVAEY 90>XP_005249598 Length = 1027 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 FFLESIAMY 9 FFLES+ + Sbjct: 10 FFLESLPAF 18>XP_005249596 Length = 1035 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 FFLESIAMY 9 FFLES+ + Sbjct: 10 FFLESLPAF 18>XP_005249594 Length = 1040 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 FFLESIAMY 9 FFLES+ + Sbjct: 10 FFLESLPAF 18>NP_078991 Length = 360 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 FFLESIAMY 9 FFL S MY Sbjct: 331 FFLISFIMY 339Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.347 0.152 0.438 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 278,539 Number of extensions: 355 Number of successful extensions: 27 Number of sequences better than 10000.0: 27 Number of HSP's gapped: 27 Number of HSP's successfully gapped: 27 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 14 ( 7.0 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.8 bits) S2: 28 (15.4 bits)
CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |