Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_570711 20 299 NP_570712 20 299 NP_570714 20 299 NP_570713 20 299 NP_570716 20 299 NP_000235 20 299 NP_570715 20 299 XP_006718620 20 299 XP_005274059 20 299 XP_005274060 20 299 XP_005274058 20 299 NP_001743 17 2528 NP_057288 17 3301 XP_006717824 17 3301 NP_056483 17 4312 NP_001273621 17 4312 XP_005250917 17 4312 XP_006716604 17 4312 XP_005250916 17 4312 XP_005250915 17 4312 XP_005250914 17 4312 XP_005250913 17 4312 NP_065822 16 5631 NP_006517 16 5631 NP_001243779 16 5631 NP_596869 16 5631 NP_612420 16 5631 XP_005260602 16 5631 XP_006723938 16 5631 XP_005258529 16 5631 XP_006715593 16 5631 XP_005267128 16 5631 XP_006715592 16 5631 XP_006715591 16 5631 XP_006712787 16 5631 XP_006712786 16 5631 NP_001254479 16 5631 NP_000825 16 7355 NP_653314 15 9605 NP_001035939 15 9605 NP_776152 15 9605 NP_001099003 15 9605 NP_079189 15 9605 NP_689690 15 9605 NP_001001671 15 9605 XP_005276312 15 9605 XP_005258610 15 9605 XP_005269575 15 9605 XP_005250390 15 9605 XP_005263448 15 9605 XP_006712016 15 9605 XP_005276022 15 9605 NP_932351 15 9605>NP_570711 Length = 610 Score = 20.4 bits (41), Expect = 299 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 FFEVANDV 8 FFEVANDV Sbjct: 364 FFEVANDV 371>NP_570712 Length = 615 Score = 20.4 bits (41), Expect = 299 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 FFEVANDV 8 FFEVANDV Sbjct: 369 FFEVANDV 376>NP_570714 Length = 615 Score = 20.4 bits (41), Expect = 299 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 FFEVANDV 8 FFEVANDV Sbjct: 369 FFEVANDV 376>NP_570713 Length = 615 Score = 20.4 bits (41), Expect = 299 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 FFEVANDV 8 FFEVANDV Sbjct: 369 FFEVANDV 376>NP_570716 Length = 615 Score = 20.4 bits (41), Expect = 299 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 FFEVANDV 8 FFEVANDV Sbjct: 369 FFEVANDV 376>NP_000235 Length = 615 Score = 20.4 bits (41), Expect = 299 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 FFEVANDV 8 FFEVANDV Sbjct: 369 FFEVANDV 376>NP_570715 Length = 615 Score = 20.4 bits (41), Expect = 299 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 FFEVANDV 8 FFEVANDV Sbjct: 369 FFEVANDV 376>XP_006718620 Length = 610 Score = 20.4 bits (41), Expect = 299 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 FFEVANDV 8 FFEVANDV Sbjct: 364 FFEVANDV 371>XP_005274059 Length = 610 Score = 20.4 bits (41), Expect = 299 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 FFEVANDV 8 FFEVANDV Sbjct: 364 FFEVANDV 371>XP_005274060 Length = 610 Score = 20.4 bits (41), Expect = 299 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 FFEVANDV 8 FFEVANDV Sbjct: 364 FFEVANDV 371>XP_005274058 Length = 610 Score = 20.4 bits (41), Expect = 299 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 FFEVANDV 8 FFEVANDV Sbjct: 364 FFEVANDV 371>NP_001743 Length = 527 Score = 17.3 bits (33), Expect = 2528 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 FFEVANDVT 9 +FEV +D+T Sbjct: 84 YFEVTHDIT 92>NP_057288 Length = 429 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 FFEVANDVT 9 FF +A+DVT Sbjct: 361 FFPLADDVT 369>XP_006717824 Length = 417 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 FFEVANDVT 9 FF +A+DVT Sbjct: 361 FFPLADDVT 369>NP_056483 Length = 1264 Score = 16.5 bits (31), Expect = 4312 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 FEVAND 7 FEVAND Sbjct: 54 FEVAND 59>NP_001273621 Length = 1252 Score = 16.5 bits (31), Expect = 4312 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 FEVAND 7 FEVAND Sbjct: 54 FEVAND 59>XP_005250917 Length = 824 Score = 16.5 bits (31), Expect = 4312 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 FEVAND 7 FEVAND Sbjct: 54 FEVAND 59>XP_006716604 Length = 1045 Score = 16.5 bits (31), Expect = 4312 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 FEVAND 7 FEVAND Sbjct: 54 FEVAND 59>XP_005250916 Length = 1099 Score = 16.5 bits (31), Expect = 4312 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 FEVAND 7 FEVAND Sbjct: 54 FEVAND 59>XP_005250915 Length = 1210 Score = 16.5 bits (31), Expect = 4312 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 FEVAND 7 FEVAND Sbjct: 54 FEVAND 59>XP_005250914 Length = 1211 Score = 16.5 bits (31), Expect = 4312 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 FEVAND 7 FEVAND Sbjct: 54 FEVAND 59>XP_005250913 Length = 1211 Score = 16.5 bits (31), Expect = 4312 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 FEVAND 7 FEVAND Sbjct: 54 FEVAND 59>NP_065822 Length = 909 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 FFEVANDVT 9 F+EV D+T Sbjct: 816 FWEVVEDIT 824>NP_006517 Length = 1048 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 FFEVANDVT 9 FF+ A DVT Sbjct: 560 FFDGAKDVT 568>NP_001243779 Length = 34350 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 FEVANDV 8 FEV NDV Sbjct: 5578 FEVQNDV 5584>NP_596869 Length = 33423 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 FEVANDV 8 FEV NDV Sbjct: 4651 FEVQNDV 4657>NP_612420 Length = 231 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 EVANDVT 9 EVAN+VT Sbjct: 126 EVANEVT 132>XP_005260602 Length = 1061 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 FFEVANDVT 9 FF+ A DVT Sbjct: 560 FFDGAKDVT 568>XP_006723938 Length = 1061 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 FFEVANDVT 9 FF+ A DVT Sbjct: 560 FFDGAKDVT 568>XP_005258529 Length = 247 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 EVANDVT 9 EVAN+VT Sbjct: 142 EVANEVT 148>XP_006715593 Length = 741 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 FFEVANDVT 9 F+EV D+T Sbjct: 648 FWEVVEDIT 656>XP_005267128 Length = 741 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 FFEVANDVT 9 F+EV D+T Sbjct: 648 FWEVVEDIT 656>XP_006715592 Length = 865 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 FFEVANDVT 9 F+EV D+T Sbjct: 772 FWEVVEDIT 780>XP_006715591 Length = 875 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 FFEVANDVT 9 F+EV D+T Sbjct: 782 FWEVVEDIT 790>XP_006712787 Length = 33978 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 FEVANDV 8 FEV NDV Sbjct: 5579 FEVQNDV 5585>XP_006712786 Length = 35484 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 FEVANDV 8 FEV NDV Sbjct: 5579 FEVQNDV 5585>NP_001254479 Length = 35991 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 FEVANDV 8 FEV NDV Sbjct: 5895 FEVQNDV 5901>NP_000825 Length = 1484 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 FEVANDV 8 FEVAN V Sbjct: 241 FEVANSV 247>NP_653314 Length = 573 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 FFEVANDVT 9 FF +A+D++ Sbjct: 215 FFSLASDIS 223>NP_001035939 Length = 499 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 VANDVT 9 +ANDVT Sbjct: 67 IANDVT 72>NP_776152 Length = 1154 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 EVANDVT 9 EVA DVT Sbjct: 656 EVAKDVT 662>NP_001099003 Length = 783 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 FFEVANDV 8 F++VAN V Sbjct: 485 FYDVANPV 492>NP_079189 Length = 1026 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 FFEVANDV 8 F++VAN V Sbjct: 485 FYDVANPV 492>NP_689690 Length = 499 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 VANDVT 9 +ANDVT Sbjct: 67 IANDVT 72>NP_001001671 Length = 1313 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 FEVANDVT 9 FE N+VT Sbjct: 517 FEATNEVT 524>XP_005276312 Length = 522 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 FFEVANDVT 9 F E+ N+VT Sbjct: 482 FLELKNEVT 490>XP_005258610 Length = 499 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 VANDVT 9 +ANDVT Sbjct: 67 IANDVT 72>XP_005269575 Length = 1113 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 EVANDVT 9 EVA DVT Sbjct: 615 EVAKDVT 621>XP_005250390 Length = 231 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 FEVANDVT 9 F+V N++T Sbjct: 46 FQVGNEIT 53>XP_005263448 Length = 522 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 FFEVANDVT 9 F E+ N+VT Sbjct: 482 FLELKNEVT 490>XP_006712016 Length = 593 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 FFEVANDVT 9 FF +A+D++ Sbjct: 215 FFSLASDIS 223>XP_005276022 Length = 522 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 FFEVANDVT 9 F E+ N+VT Sbjct: 482 FLELKNEVT 490>NP_932351 Length = 305 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 FEVANDVT 9 F+V N++T Sbjct: 46 FQVGNEIT 53Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.328 0.139 0.396 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 417,460 Number of extensions: 678 Number of successful extensions: 53 Number of sequences better than 10000.0: 53 Number of HSP's gapped: 53 Number of HSP's successfully gapped: 53 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.1 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |