Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_008835 20 299 NP_001075109 20 299 NP_937791 17 3301 XP_005269585 17 3301 XP_005260020 17 4312 NP_060152 17 4312 NP_006505 16 5631 XP_005265428 16 5631 NP_000264 15 9605 NP_008995 15 9605 NP_001019831 15 9605 NP_009049 15 9605 NP_060599 15 9605 NP_699197 15 9605 XP_005274599 15 9605 XP_005274598 15 9605 XP_005257557 15 9605 XP_006714558 15 9605 XP_006713877 15 9605 XP_006713876 15 9605 XP_006713875 15 9605 XP_006713874 15 9605 XP_006713873 15 9605>NP_008835 Length = 4128 Score = 20.4 bits (41), Expect = 299 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 FESLVIYME 9 FE+LVIYME Sbjct: 1101 FEALVIYME 1109>NP_001075109 Length = 4097 Score = 20.4 bits (41), Expect = 299 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 FESLVIYME 9 FE+LVIYME Sbjct: 1101 FEALVIYME 1109>NP_937791 Length = 756 Score = 16.9 bits (32), Expect = 3301 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 ESLVIYME 9 ESL+++ME Sbjct: 631 ESLIVFME 638>XP_005269585 Length = 704 Score = 16.9 bits (32), Expect = 3301 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 ESLVIYME 9 ESL+++ME Sbjct: 631 ESLIVFME 638>XP_005260020 Length = 509 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 FESLVIYME 9 FE LVIY + Sbjct: 62 FEKLVIYCD 70>NP_060152 Length = 509 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 FESLVIYME 9 FE LVIY + Sbjct: 62 FEKLVIYCD 70>NP_006505 Length = 1956 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 FESLVIYM 8 FES +I+M Sbjct: 1154 FESFIIFM 1161>XP_005265428 Length = 1959 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 FESLVIYM 8 FES +I+M Sbjct: 1157 FESFIIFM 1164>NP_000264 Length = 404 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 ESLVIYME 9 ESL+ Y+E Sbjct: 264 ESLLFYLE 271>NP_008995 Length = 1289 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 FESLVIYME 9 FE +VI+ E Sbjct: 453 FEQIVIFSE 461>NP_001019831 Length = 2986 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 FESLVIYME 9 FE +VI+ E Sbjct: 2150 FEQIVIFSE 2158>NP_009049 Length = 3097 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 FESLVIYME 9 FE +VI+ E Sbjct: 2191 FEQIVIFSE 2199>NP_060599 Length = 261 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 FESLVIYME 9 F SLV Y E Sbjct: 126 FASLVFYWE 134>NP_699197 Length = 3571 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 FESLVIY 7 FES +IY Sbjct: 3259 FESTIIY 3265>XP_005274599 Length = 380 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 ESLVIYME 9 ESL+ Y+E Sbjct: 264 ESLLFYLE 271>XP_005274598 Length = 386 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 ESLVIYME 9 ESL+ Y+E Sbjct: 264 ESLLFYLE 271>XP_005257557 Length = 181 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 FESLVIYME 9 F SLV Y E Sbjct: 46 FASLVFYWE 54>XP_006714558 Length = 2612 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 FESLVIYME 9 FE +VI+ E Sbjct: 1706 FEQIVIFSE 1714>XP_006713877 Length = 2956 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 FESLVIYME 9 FE +VI+ E Sbjct: 2120 FEQIVIFSE 2128>XP_006713876 Length = 2966 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 FESLVIYME 9 FE +VI+ E Sbjct: 2130 FEQIVIFSE 2138>XP_006713875 Length = 2975 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 FESLVIYME 9 FE +VI+ E Sbjct: 2139 FEQIVIFSE 2147>XP_006713874 Length = 2979 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 FESLVIYME 9 FE +VI+ E Sbjct: 2143 FEQIVIFSE 2151>XP_006713873 Length = 2988 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 FESLVIYME 9 FE +VI+ E Sbjct: 2152 FEQIVIFSE 2160Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.331 0.145 0.382 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 374,891 Number of extensions: 623 Number of successful extensions: 23 Number of sequences better than 10000.0: 23 Number of HSP's gapped: 23 Number of HSP's successfully gapped: 23 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.2 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |