Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_001185951 17 2528 NP_055526 17 2528 XP_006721168 17 2528 XP_005255778 17 2528 XP_005255776 17 2528 XP_006723199 17 4312 XP_006723198 17 4312 XP_006723197 17 4312 XP_006723196 17 4312 NP_056418 17 4312 NP_001010848 16 5631 NP_001264044 16 5631 NP_001159444 16 5631 XP_005276355 16 5631 XP_005269501 16 5631 XP_005250801 16 5631 XP_005276060 16 5631 NP_005568 16 7355 NP_055514 16 7355 NP_954863 16 7355 XP_005255769 16 7355 XP_005255768 16 7355 XP_005255767 16 7355 NP_570141 16 7355 NP_001135440 16 7355 NP_955523 15 9605 NP_055766 15 9605 NP_955522 15 9605 NP_036547 15 9605 NP_001192191 15 9605 NP_001138358 15 9605 NP_001138357 15 9605 NP_004134 15 9605 NP_001138359 15 9605 NP_056078 15 9605 NP_001078945 15 9605 NP_001275716 15 9605 NP_001167587 15 9605 NP_001167588 15 9605 NP_001076437 15 9605 NP_065904 15 9605 NP_001028723 15 9605 NP_001136336 15 9605 XP_005262324 15 9605 XP_005262323 15 9605 XP_006721417 15 9605 XP_006721416 15 9605 XP_005254315 15 9605 XP_005254314 15 9605 XP_006720509 15 9605 XP_005254313 15 9605 XP_005254312 15 9605 NP_001005163 15 9605 NP_954586 15 9605>NP_001185951 Length = 1012 Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 FEGVAVASP 9 F GVA+ SP Sbjct: 38 FHGVAILSP 46>NP_055526 Length = 991 Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 FEGVAVASP 9 F GVA+ SP Sbjct: 38 FHGVAILSP 46>XP_006721168 Length = 971 Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 FEGVAVASP 9 F GVA+ SP Sbjct: 38 FHGVAILSP 46>XP_005255778 Length = 991 Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 FEGVAVASP 9 F GVA+ SP Sbjct: 38 FHGVAILSP 46>XP_005255776 Length = 1012 Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 FEGVAVASP 9 F GVA+ SP Sbjct: 38 FHGVAILSP 46>XP_006723199 Length = 505 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 EGVAVASP 9 EGVAV +P Sbjct: 48 EGVAVTAP 55>XP_006723198 Length = 587 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 EGVAVASP 9 EGVAV +P Sbjct: 48 EGVAVTAP 55>XP_006723197 Length = 587 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 EGVAVASP 9 EGVAV +P Sbjct: 48 EGVAVTAP 55>XP_006723196 Length = 587 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 EGVAVASP 9 EGVAV +P Sbjct: 48 EGVAVTAP 55>NP_056418 Length = 531 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 EGVAVASP 9 EGVAV +P Sbjct: 48 EGVAVTAP 55>NP_001010848 Length = 696 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 EGVAVASP 9 EG A ASP Sbjct: 3 EGAAAASP 10>NP_001264044 Length = 4516 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 FEGVAVASP 9 F+G+ ASP Sbjct: 2717 FQGILFASP 2725>NP_001159444 Length = 695 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 EGVAVASP 9 EG A ASP Sbjct: 3 EGAAAASP 10>XP_005276355 Length = 233 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 GVAVASP 9 G+AVASP Sbjct: 38 GLAVASP 44>XP_005269501 Length = 720 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 EGVAVASP 9 EG A ASP Sbjct: 3 EGAAAASP 10>XP_005250801 Length = 233 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 GVAVASP 9 G+AVASP Sbjct: 38 GLAVASP 44>XP_005276060 Length = 233 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 GVAVASP 9 G+AVASP Sbjct: 38 GLAVASP 44>NP_005568 Length = 2040 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 EGVAVASP 9 EG AVA P Sbjct: 109 EGTAVAPP 116Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 EGVAVASP 9 EG AVA P Sbjct: 223 EGTAVAPP 230Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 EGVAVASP 9 EG AVA P Sbjct: 337 EGTAVAPP 344Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 EGVAVASP 9 EG AVA P Sbjct: 451 EGTAVAPP 458Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 EGVAVASP 9 EG AVA P Sbjct: 565 EGTAVAPP 572Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 EGVAVASP 9 EG AVA P Sbjct: 679 EGTAVAPP 686Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 EGVAVASP 9 EG AVA P Sbjct: 793 EGTAVAPP 800Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 EGVAVASP 9 EG AVA P Sbjct: 907 EGTAVAPP 914>NP_055514 Length = 1832 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 EGVAVASP 9 EGVA A+P Sbjct: 920 EGVAEAAP 927>NP_954863 Length = 522 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 FEGVAVASP 9 F+G A+ SP Sbjct: 28 FKGAALVSP 36>XP_005255769 Length = 1808 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 EGVAVASP 9 EGVA A+P Sbjct: 920 EGVAEAAP 927>XP_005255768 Length = 1832 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 EGVAVASP 9 EGVA A+P Sbjct: 920 EGVAEAAP 927>XP_005255767 Length = 1832 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 EGVAVASP 9 EGVA A+P Sbjct: 920 EGVAEAAP 927>NP_570141 Length = 445 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 FEGVAVASP 9 F+G A+ SP Sbjct: 28 FKGAALVSP 36>NP_001135440 Length = 411 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 FEGVAVASP 9 F+G A+ SP Sbjct: 28 FKGAALVSP 36>NP_955523 Length = 462 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 FEGVAVASP 9 FE VAV P Sbjct: 17 FENVAVCLP 25>NP_055766 Length = 407 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 FEGVAVASP 9 FE VAV P Sbjct: 17 FENVAVCLP 25>NP_955522 Length = 333 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 FEGVAVASP 9 FE VAV P Sbjct: 17 FENVAVCLP 25>NP_036547 Length = 910 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 FEGVAV 6 FEGVA+ Sbjct: 44 FEGVAI 49>NP_001192191 Length = 117 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 FEGVAV 6 FEGVA+ Sbjct: 44 FEGVAI 49>NP_001138358 Length = 193 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 FEGVAVASP 9 ++G+A A+P Sbjct: 104 YQGMAAATP 112>NP_001138357 Length = 219 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 FEGVAVASP 9 ++G+A A+P Sbjct: 130 YQGMAAATP 138>NP_004134 Length = 193 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 FEGVAVASP 9 ++G+A A+P Sbjct: 104 YQGMAAATP 112>NP_001138359 Length = 193 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 FEGVAVASP 9 ++G+A A+P Sbjct: 104 YQGMAAATP 112>NP_056078 Length = 3036 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 EGVAVASP 9 EG++V SP Sbjct: 582 EGMSVGSP 589>NP_001078945 Length = 417 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 EGVAVASP 9 EG A+A+P Sbjct: 286 EGAALATP 293>NP_001275716 Length = 462 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 EGVAVASP 9 EG+ VA P Sbjct: 380 EGIPVAQP 387>NP_001167587 Length = 3037 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 EGVAVASP 9 EG++V SP Sbjct: 582 EGMSVGSP 589>NP_001167588 Length = 2400 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 EGVAVASP 9 EG++V SP Sbjct: 582 EGMSVGSP 589>NP_001076437 Length = 507 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 EGVAVASP 9 EG+ VA P Sbjct: 425 EGIPVAQP 432>NP_065904 Length = 622 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 EGVAVASP 9 EG++ ASP Sbjct: 499 EGLSAASP 506>NP_001028723 Length = 457 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 EGVAVASP 9 EG+ VA P Sbjct: 375 EGIPVAQP 382>NP_001136336 Length = 2521 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 EGVAVASP 9 EG+ VA+P Sbjct: 761 EGLGVATP 768>XP_005262324 Length = 193 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 FEGVAVASP 9 ++G+A A+P Sbjct: 104 YQGMAAATP 112>XP_005262323 Length = 219 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 FEGVAVASP 9 ++G+A A+P Sbjct: 130 YQGMAAATP 138>XP_006721417 Length = 2497 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 EGVAVASP 9 EG+ VA+P Sbjct: 761 EGLGVATP 768>XP_006721416 Length = 2504 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 EGVAVASP 9 EG+ VA+P Sbjct: 744 EGLGVATP 751>XP_005254315 Length = 2576 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 EGVAVASP 9 EG++V SP Sbjct: 582 EGMSVGSP 589>XP_005254314 Length = 2605 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 EGVAVASP 9 EG++V SP Sbjct: 582 EGMSVGSP 589>XP_006720509 Length = 2646 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 EGVAVASP 9 EG++V SP Sbjct: 582 EGMSVGSP 589>XP_005254313 Length = 3057 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 EGVAVASP 9 EG++V SP Sbjct: 582 EGMSVGSP 589>XP_005254312 Length = 3058 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 EGVAVASP 9 EG++V SP Sbjct: 582 EGMSVGSP 589>NP_001005163 Length = 318 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 FEGVAVASP 9 F VA+ SP Sbjct: 153 FRSVAIVSP 161>NP_954586 Length = 417 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 EGVAVASP 9 EG A+A+P Sbjct: 286 EGAALATP 293Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.314 0.131 0.369 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 561,048 Number of extensions: 1474 Number of successful extensions: 61 Number of sequences better than 10000.0: 54 Number of HSP's gapped: 61 Number of HSP's successfully gapped: 61 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.6 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |