Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_733751 19 665 XP_006716142 19 665 XP_005250088 19 665 XP_006716141 19 665 XP_005250085 19 665 XP_006716140 19 665 XP_005250084 19 665 XP_005250083 19 665 XP_005250082 19 665 NP_002963 17 3301 NP_006575 17 3301 NP_001180459 17 3301 NP_001180458 17 3301 XP_005261992 17 3301 XP_005261991 17 3301 XP_005261989 17 3301 XP_005261988 17 3301 XP_006721705 17 3301 XP_006721704 17 3301 NP_075054 17 3301 NP_006297 16 7355 NP_001268392 16 7355 NP_001177652 15 9605 NP_001005374 15 9605 NP_612370 15 9605 NP_001005373 15 9605 NP_073597 15 9605 NP_001258097 15 9605 XP_006723672 15 9605 XP_005260863 15 9605 XP_005260862 15 9605 XP_005260861 15 9605 XP_006717379 15 9605>NP_733751 Length = 4911 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 FEAAQVKAK 9 FEAAQV+AK Sbjct: 4313 FEAAQVEAK 4321>XP_006716142 Length = 4927 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 FEAAQVKAK 9 FEAAQV+AK Sbjct: 4329 FEAAQVEAK 4337>XP_005250088 Length = 4928 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 FEAAQVKAK 9 FEAAQV+AK Sbjct: 4330 FEAAQVEAK 4338>XP_006716141 Length = 4959 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 FEAAQVKAK 9 FEAAQV+AK Sbjct: 4361 FEAAQVEAK 4369>XP_005250085 Length = 4979 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 FEAAQVKAK 9 FEAAQV+AK Sbjct: 4385 FEAAQVEAK 4393>XP_006716140 Length = 4982 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 FEAAQVKAK 9 FEAAQV+AK Sbjct: 4384 FEAAQVEAK 4392>XP_005250084 Length = 4982 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 FEAAQVKAK 9 FEAAQV+AK Sbjct: 4384 FEAAQVEAK 4392>XP_005250083 Length = 4982 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 FEAAQVKAK 9 FEAAQV+AK Sbjct: 4384 FEAAQVEAK 4392>XP_005250082 Length = 4983 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 FEAAQVKAK 9 FEAAQV+AK Sbjct: 4385 FEAAQVEAK 4393>NP_002963 Length = 1893 Score = 16.9 bits (32), Expect = 3301 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 FEAAQVKA 8 FEA QVKA Sbjct: 1380 FEARQVKA 1387>NP_006575 Length = 530 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 FEAAQVKA 8 FEAA++KA Sbjct: 123 FEAAKIKA 130>NP_001180459 Length = 485 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 FEAAQVKA 8 FEAA++KA Sbjct: 78 FEAAKIKA 85>NP_001180458 Length = 493 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 FEAAQVKA 8 FEAA++KA Sbjct: 123 FEAAKIKA 130>XP_005261992 Length = 1867 Score = 16.9 bits (32), Expect = 3301 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 FEAAQVKA 8 FEA QVKA Sbjct: 1354 FEARQVKA 1361>XP_005261991 Length = 1868 Score = 16.9 bits (32), Expect = 3301 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 FEAAQVKA 8 FEA QVKA Sbjct: 1355 FEARQVKA 1362>XP_005261989 Length = 1891 Score = 16.9 bits (32), Expect = 3301 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 FEAAQVKA 8 FEA QVKA Sbjct: 1378 FEARQVKA 1385>XP_005261988 Length = 1894 Score = 16.9 bits (32), Expect = 3301 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 FEAAQVKA 8 FEA QVKA Sbjct: 1381 FEARQVKA 1388>XP_006721705 Length = 464 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 FEAAQVKA 8 FEAA++KA Sbjct: 57 FEAAKIKA 64>XP_006721704 Length = 516 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 FEAAQVKA 8 FEAA++KA Sbjct: 123 FEAAKIKA 130>NP_075054 Length = 467 Score = 16.9 bits (32), Expect = 3301 Identities = 7/8 (87%), Positives = 8/8 (100%) Query: 2 EAAQVKAK 9 +AAQVKAK Sbjct: 314 KAAQVKAK 321Score = 16.9 bits (32), Expect = 3301 Identities = 7/8 (87%), Positives = 8/8 (100%) Query: 2 EAAQVKAK 9 +AAQVKAK Sbjct: 325 KAAQVKAK 332>NP_006297 Length = 1233 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 FEAAQVKAK 9 FEAA+ +AK Sbjct: 1045 FEAARKRAK 1053>NP_001268392 Length = 1211 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 FEAAQVKAK 9 FEAA+ +AK Sbjct: 1023 FEAARKRAK 1031>NP_001177652 Length = 696 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 FEAAQVK 7 FEA QVK Sbjct: 457 FEALQVK 463>NP_001005374 Length = 723 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 FEAAQVK 7 FEA QVK Sbjct: 457 FEALQVK 463>NP_612370 Length = 723 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 FEAAQVK 7 FEA QVK Sbjct: 457 FEALQVK 463>NP_001005373 Length = 723 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 FEAAQVK 7 FEA QVK Sbjct: 457 FEALQVK 463>NP_073597 Length = 454 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 AAQVKAK 9 AAQ+KAK Sbjct: 62 AAQLKAK 68>NP_001258097 Length = 403 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 AAQVKAK 9 AAQ+KAK Sbjct: 62 AAQLKAK 68>XP_006723672 Length = 203 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 AAQVKAK 9 AAQ+KAK Sbjct: 62 AAQLKAK 68>XP_005260863 Length = 362 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 AAQVKAK 9 AAQ+KAK Sbjct: 62 AAQLKAK 68>XP_005260862 Length = 403 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 AAQVKAK 9 AAQ+KAK Sbjct: 62 AAQLKAK 68>XP_005260861 Length = 454 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 AAQVKAK 9 AAQ+KAK Sbjct: 62 AAQLKAK 68>XP_006717379 Length = 690 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 FEAAQVK 7 FEA QVK Sbjct: 457 FEALQVK 463Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.312 0.116 0.279 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 215,017 Number of extensions: 232 Number of successful extensions: 34 Number of sequences better than 10000.0: 33 Number of HSP's gapped: 34 Number of HSP's successfully gapped: 34 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.7 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |