Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_001245202 20 509 NP_001245200 20 509 NP_001161091 20 509 NP_000240 20 509 NP_001161090 20 509 NP_001161089 20 509 NP_001245203 20 509 XP_005265223 20 509 XP_005265221 20 509 XP_005265220 20 509 XP_005265218 20 509 NP_775822 17 4312 XP_006717062 17 4312 XP_006717061 17 4312 XP_005251851 17 4312 XP_005251850 17 4312 NP_001018125 16 7355 NP_149075 16 7355 NP_861448 16 7355 NP_001186795 16 7355 XP_005277590 16 7355 XP_005260809 16 7355 XP_005260808 16 7355 XP_005260807 16 7355 XP_005268741 16 7355 XP_005268740 16 7355 XP_005268739 16 7355 XP_006713088 16 7355 XP_006713087 16 7355 XP_005265003 16 7355 XP_006713086 16 7355 XP_006713085 16 7355 XP_006713084 16 7355 NP_065920 15 9605>NP_001245202 Length = 515 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 FDLVMLALD 9 FDL MLALD Sbjct: 342 FDLAMLALD 350>NP_001245200 Length = 687 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 FDLVMLALD 9 FDL MLALD Sbjct: 583 FDLAMLALD 591>NP_001161091 Length = 515 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 FDLVMLALD 9 FDL MLALD Sbjct: 342 FDLAMLALD 350>NP_000240 Length = 756 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 FDLVMLALD 9 FDL MLALD Sbjct: 583 FDLAMLALD 591>NP_001161090 Length = 515 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 FDLVMLALD 9 FDL MLALD Sbjct: 342 FDLAMLALD 350>NP_001161089 Length = 658 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 FDLVMLALD 9 FDL MLALD Sbjct: 485 FDLAMLALD 493>NP_001245203 Length = 515 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 FDLVMLALD 9 FDL MLALD Sbjct: 342 FDLAMLALD 350>XP_005265223 Length = 415 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 FDLVMLALD 9 FDL MLALD Sbjct: 242 FDLAMLALD 250>XP_005265221 Length = 515 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 FDLVMLALD 9 FDL MLALD Sbjct: 342 FDLAMLALD 350>XP_005265220 Length = 515 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 FDLVMLALD 9 FDL MLALD Sbjct: 342 FDLAMLALD 350>XP_005265218 Length = 687 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 FDLVMLALD 9 FDL MLALD Sbjct: 514 FDLAMLALD 522>NP_775822 Length = 871 Score = 16.5 bits (31), Expect = 4312 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 FDLVMLALD 9 FDLVML D Sbjct: 397 FDLVMLLND 405>XP_006717062 Length = 828 Score = 16.5 bits (31), Expect = 4312 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 FDLVMLALD 9 FDLVML D Sbjct: 339 FDLVMLLND 347>XP_006717061 Length = 872 Score = 16.5 bits (31), Expect = 4312 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 FDLVMLALD 9 FDLVML D Sbjct: 397 FDLVMLLND 405>XP_005251851 Length = 885 Score = 16.5 bits (31), Expect = 4312 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 FDLVMLALD 9 FDLVML D Sbjct: 397 FDLVMLLND 405>XP_005251850 Length = 886 Score = 16.5 bits (31), Expect = 4312 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 FDLVMLALD 9 FDLVML D Sbjct: 397 FDLVMLLND 405>NP_001018125 Length = 1451 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 FDLVML 6 FDLVML Sbjct: 380 FDLVML 385>NP_149075 Length = 1471 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 FDLVML 6 FDLVML Sbjct: 380 FDLVML 385>NP_861448 Length = 914 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 FDLVMLALD 9 F+L MLA+D Sbjct: 672 FNLGMLAMD 680>NP_001186795 Length = 1392 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 DLVMLALD 9 DLV L+LD Sbjct: 1193 DLVQLSLD 1200>XP_005277590 Length = 900 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 FDLVML 6 FDLVML Sbjct: 127 FDLVML 132>XP_005260809 Length = 1832 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 DLVMLALD 9 DLV L+LD Sbjct: 1633 DLVQLSLD 1640>XP_005260808 Length = 1872 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 DLVMLALD 9 DLV L+LD Sbjct: 1673 DLVQLSLD 1680>XP_005260807 Length = 1883 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 DLVMLALD 9 DLV L+LD Sbjct: 1684 DLVQLSLD 1691>XP_005268741 Length = 503 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 FDLVMLALD 9 F+L MLA+D Sbjct: 261 FNLGMLAMD 269>XP_005268740 Length = 532 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 FDLVMLALD 9 F+L MLA+D Sbjct: 290 FNLGMLAMD 298>XP_005268739 Length = 914 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 FDLVMLALD 9 F+L MLA+D Sbjct: 672 FNLGMLAMD 680>XP_006713088 Length = 1382 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 FDLVML 6 FDLVML Sbjct: 380 FDLVML 385>XP_006713087 Length = 1432 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 FDLVML 6 FDLVML Sbjct: 380 FDLVML 385>XP_005265003 Length = 1451 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 FDLVML 6 FDLVML Sbjct: 380 FDLVML 385>XP_006713086 Length = 1458 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 FDLVML 6 FDLVML Sbjct: 380 FDLVML 385>XP_006713085 Length = 1471 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 FDLVML 6 FDLVML Sbjct: 380 FDLVML 385>XP_006713084 Length = 1471 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 FDLVML 6 FDLVML Sbjct: 380 FDLVML 385>NP_065920 Length = 890 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 DLVMLALD 9 DLV+ ALD Sbjct: 574 DLVLWALD 581Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.344 0.158 0.438 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 255,029 Number of extensions: 422 Number of successful extensions: 34 Number of sequences better than 10000.0: 34 Number of HSP's gapped: 34 Number of HSP's successfully gapped: 34 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.6 bits) S2: 28 (15.4 bits)
CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |