Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_000236 20 299 NP_001120972 20 299 XP_006716054 20 299 XP_006716053 20 299 XP_006716052 20 299 XP_006716051 20 299 NP_000531 18 1935 NP_001036188 18 1935 XP_006723382 18 1935 XP_006723381 18 1935 XP_006723380 18 1935 NP_776249 17 4312 NP_001188386 17 4312 NP_938207 17 4312 NP_112562 17 4312 NP_001269869 17 4312 NP_001034934 17 4312 XP_006722041 17 4312 XP_005257576 17 4312 XP_006722040 17 4312 XP_006722039 17 4312 XP_005257575 17 4312 XP_005267408 17 4312 XP_005246372 17 4312 NP_002401 16 5631 XP_006719941 16 5631 XP_006719940 16 5631 XP_005263727 16 5631 XP_005263726 16 5631 XP_006712598 16 5631 XP_005263725 16 5631 XP_006712597 16 5631 XP_005263723 16 5631 NP_113619 16 5631 NP_066408 16 7355 NP_003504 16 7355 NP_002096 16 7355 NP_005752 16 7355 NP_542163 16 7355 NP_061883 16 7355 NP_778235 16 7355 NP_003508 16 7355 NP_003500 16 7355 NP_254280 16 7355 NP_066390 16 7355 NP_003501 16 7355 NP_003505 16 7355 NP_003502 16 7355 NP_003503 16 7355 NP_734466 16 7355 NP_001035807 16 7355 NP_066409 16 7355 NP_003507 16 7355 XP_006719249 16 7355 NP_079232 16 7355 NP_808760 16 7355 NP_066544 16 7355 NP_001275938 15 9605 NP_001035362 15 9605 NP_919226 15 9605 NP_056073 15 9605 NP_060512 15 9605 NP_443098 15 9605 XP_006722030 15 9605 XP_005258052 15 9605 XP_005273894 15 9605 XP_006717082 15 9605 XP_006717081 15 9605 NP_878253 15 9605>NP_000236 Length = 1390 Score = 20.4 bits (41), Expect = 299 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 FDLKKTRVV 9 FDLKKTRV+ Sbjct: 596 FDLKKTRVL 604>NP_001120972 Length = 1408 Score = 20.4 bits (41), Expect = 299 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 FDLKKTRVV 9 FDLKKTRV+ Sbjct: 596 FDLKKTRVL 604>XP_006716054 Length = 960 Score = 20.4 bits (41), Expect = 299 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 FDLKKTRVV 9 FDLKKTRV+ Sbjct: 166 FDLKKTRVL 174>XP_006716053 Length = 960 Score = 20.4 bits (41), Expect = 299 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 FDLKKTRVV 9 FDLKKTRV+ Sbjct: 166 FDLKKTRVL 174>XP_006716052 Length = 1409 Score = 20.4 bits (41), Expect = 299 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 FDLKKTRVV 9 FDLKKTRV+ Sbjct: 615 FDLKKTRVL 623>XP_006716051 Length = 1427 Score = 20.4 bits (41), Expect = 299 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 FDLKKTRVV 9 FDLKKTRV+ Sbjct: 615 FDLKKTRVL 623>NP_000531 Length = 5038 Score = 17.7 bits (34), Expect = 1935 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 FDLKKTRVV 9 FDL K RVV Sbjct: 1463 FDLSKVRVV 1471>NP_001036188 Length = 5033 Score = 17.7 bits (34), Expect = 1935 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 FDLKKTRVV 9 FDL K RVV Sbjct: 1463 FDLSKVRVV 1471>XP_006723382 Length = 5027 Score = 17.7 bits (34), Expect = 1935 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 FDLKKTRVV 9 FDL K RVV Sbjct: 1463 FDLSKVRVV 1471>XP_006723381 Length = 5031 Score = 17.7 bits (34), Expect = 1935 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 FDLKKTRVV 9 FDL K RVV Sbjct: 1462 FDLSKVRVV 1470>XP_006723380 Length = 5032 Score = 17.7 bits (34), Expect = 1935 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 FDLKKTRVV 9 FDL K RVV Sbjct: 1463 FDLSKVRVV 1471>NP_776249 Length = 414 Score = 16.5 bits (31), Expect = 4312 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 FDLKKT 6 FDLKKT Sbjct: 317 FDLKKT 322>NP_001188386 Length = 1497 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 DLKKTRVV 9 DL+KTR+V Sbjct: 318 DLEKTRLV 325>NP_938207 Length = 1491 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 DLKKTRVV 9 DL+KTR+V Sbjct: 312 DLEKTRLV 319>NP_112562 Length = 1451 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 DLKKTRVV 9 DL+KTR+V Sbjct: 312 DLEKTRLV 319>NP_001269869 Length = 517 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 DLKKTRV 8 DL+KTRV Sbjct: 321 DLRKTRV 327>NP_001034934 Length = 518 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 DLKKTRV 8 DL+KTRV Sbjct: 321 DLRKTRV 327>XP_006722041 Length = 1445 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 DLKKTRVV 9 DL+KTR+V Sbjct: 315 DLEKTRLV 322>XP_005257576 Length = 1454 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 DLKKTRVV 9 DL+KTR+V Sbjct: 315 DLEKTRLV 322>XP_006722040 Length = 1466 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 DLKKTRVV 9 DL+KTR+V Sbjct: 315 DLEKTRLV 322>XP_006722039 Length = 1491 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 DLKKTRVV 9 DL+KTR+V Sbjct: 312 DLEKTRLV 319>XP_005257575 Length = 1494 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 DLKKTRVV 9 DL+KTR+V Sbjct: 315 DLEKTRLV 322>XP_005267408 Length = 414 Score = 16.5 bits (31), Expect = 4312 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 FDLKKT 6 FDLKKT Sbjct: 317 FDLKKT 322>XP_005246372 Length = 420 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 DLKKTRV 8 DL+KTRV Sbjct: 223 DLRKTRV 229>NP_002401 Length = 741 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 FDLKKTRVV 9 +DLKKT V Sbjct: 80 YDLKKTLAV 88>XP_006719941 Length = 699 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 DLKKTR 7 DLKKTR Sbjct: 509 DLKKTR 514>XP_006719940 Length = 820 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 DLKKTR 7 DLKKTR Sbjct: 638 DLKKTR 643>XP_005263727 Length = 741 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 FDLKKTRVV 9 +DLKKT V Sbjct: 80 YDLKKTLAV 88>XP_005263726 Length = 741 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 FDLKKTRVV 9 +DLKKT V Sbjct: 80 YDLKKTLAV 88>XP_006712598 Length = 741 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 FDLKKTRVV 9 +DLKKT V Sbjct: 80 YDLKKTLAV 88>XP_005263725 Length = 741 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 FDLKKTRVV 9 +DLKKT V Sbjct: 80 YDLKKTLAV 88>XP_006712597 Length = 741 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 FDLKKTRVV 9 +DLKKT V Sbjct: 80 YDLKKTLAV 88>XP_005263723 Length = 741 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 FDLKKTRVV 9 +DLKKT V Sbjct: 80 YDLKKTLAV 88>NP_113619 Length = 828 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 DLKKTR 7 DLKKTR Sbjct: 638 DLKKTR 643>NP_066408 Length = 130 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 DLKKTRVV 9 D KKTR++ Sbjct: 73 DNKKTRII 80>NP_003504 Length = 130 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 DLKKTRVV 9 D KKTR++ Sbjct: 73 DNKKTRII 80>NP_002096 Length = 143 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 DLKKTRVV 9 D KKTR++ Sbjct: 73 DNKKTRII 80>NP_005752 Length = 1568 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 FDLKKT 6 FD+KKT Sbjct: 1430 FDIKKT 1435>NP_542163 Length = 128 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 DLKKTRVV 9 D KKTR++ Sbjct: 73 DNKKTRII 80>NP_061883 Length = 424 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 DLKKTRVV 9 D+KKTR + Sbjct: 393 DIKKTRKI 400>NP_778235 Length = 130 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 DLKKTRVV 9 D KKTR++ Sbjct: 73 DNKKTRII 80>NP_003508 Length = 129 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 DLKKTRVV 9 D KKTR++ Sbjct: 73 DNKKTRII 80>NP_003500 Length = 130 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 DLKKTRVV 9 D KKTR++ Sbjct: 73 DNKKTRII 80>NP_254280 Length = 130 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 DLKKTRVV 9 D KKTR++ Sbjct: 73 DNKKTRII 80>NP_066390 Length = 130 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 DLKKTRVV 9 D KKTR++ Sbjct: 73 DNKKTRII 80>NP_003501 Length = 130 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 DLKKTRVV 9 D KKTR++ Sbjct: 73 DNKKTRII 80>NP_003505 Length = 130 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 DLKKTRVV 9 D KKTR++ Sbjct: 73 DNKKTRII 80>NP_003502 Length = 130 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 DLKKTRVV 9 D KKTR++ Sbjct: 73 DNKKTRII 80>NP_003503 Length = 130 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 DLKKTRVV 9 D KKTR++ Sbjct: 73 DNKKTRII 80>NP_734466 Length = 131 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 DLKKTRVV 9 D KKTR++ Sbjct: 73 DNKKTRII 80>NP_001035807 Length = 130 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 DLKKTRVV 9 D KKTR++ Sbjct: 73 DNKKTRII 80>NP_066409 Length = 130 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 DLKKTRVV 9 D KKTR++ Sbjct: 73 DNKKTRII 80>NP_003507 Length = 130 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 DLKKTRVV 9 D KKTR++ Sbjct: 73 DNKKTRII 80>XP_006719249 Length = 1555 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 FDLKKT 6 FD+KKT Sbjct: 1417 FDIKKT 1422>NP_079232 Length = 643 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 LKKTRVV 9 LKKTRV+ Sbjct: 125 LKKTRVM 131>NP_808760 Length = 129 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 DLKKTRVV 9 D KKTR++ Sbjct: 73 DNKKTRII 80>NP_066544 Length = 128 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 DLKKTRVV 9 D KKTR++ Sbjct: 73 DNKKTRII 80>NP_001275938 Length = 578 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 DLKKTR 7 D+KKTR Sbjct: 148 DMKKTR 153>NP_001035362 Length = 1762 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 FDLKKTRVV 9 +DL+ RVV Sbjct: 325 YDLRSNRVV 333>NP_919226 Length = 1209 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 FDLKKTRV 8 FD K T+V Sbjct: 462 FDFKSTKV 469>NP_056073 Length = 1219 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 LKKTRV 8 LKKTRV Sbjct: 779 LKKTRV 784>NP_060512 Length = 578 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 DLKKTR 7 D+KKTR Sbjct: 148 DMKKTR 153>NP_443098 Length = 525 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 FDLKKTRVV 9 +DL+ RVV Sbjct: 325 YDLRSNRVV 333>XP_006722030 Length = 578 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 DLKKTR 7 D+KKTR Sbjct: 148 DMKKTR 153>XP_005258052 Length = 578 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 DLKKTR 7 D+KKTR Sbjct: 148 DMKKTR 153>XP_005273894 Length = 520 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 FDLKKT 6 FDLK+T Sbjct: 247 FDLKRT 252>XP_006717082 Length = 1151 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 LKKTRV 8 LKKTRV Sbjct: 711 LKKTRV 716>XP_006717081 Length = 1209 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 LKKTRV 8 LKKTRV Sbjct: 769 LKKTRV 774>NP_878253 Length = 520 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 FDLKKT 6 FDLK+T Sbjct: 247 FDLKRT 252Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.333 0.146 0.393 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 434,320 Number of extensions: 625 Number of successful extensions: 69 Number of sequences better than 10000.0: 69 Number of HSP's gapped: 69 Number of HSP's successfully gapped: 69 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.2 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |