Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_006209 20 390 XP_006713721 20 390 NP_775821 17 3301 XP_005251455 17 3301 XP_005251456 17 3301 XP_005251454 17 3301 NP_001243754 17 4312 NP_001243752 17 4312 NP_001123991 17 4312 NP_001229771 17 4312 NP_001229772 17 4312 NP_001123992 17 4312 NP_009083 17 4312 NP_001229770 17 4312 NP_001243753 17 4312 XP_006718369 17 4312 NP_056344 16 5631 NP_002010 16 5631 NP_001153392 16 5631 NP_001153503 16 5631 NP_001153502 16 5631 XP_006715519 16 5631 NP_036342 16 7355 NP_001093149 16 7355 NP_065433 16 7355 NP_689707 16 7355 NP_001153101 16 7355 NP_003636 16 7355 NP_997253 16 7355 NP_001137159 16 7355 XP_005251870 16 7355 NP_001003750 16 7355 NP_073753 15 9605 NP_064541 15 9605 NP_689854 15 9605 NP_683692 15 9605 NP_114110 15 9605 NP_060700 15 9605 NP_006832 15 9605 XP_005261216 15 9605 XP_006719336 15 9605 XP_006719335 15 9605 XP_005274406 15 9605 XP_006715822 15 9605 XP_005249870 15 9605 XP_005249869 15 9605 XP_005248208 15 9605 XP_005248207 15 9605 XP_006714021 15 9605 XP_005265461 15 9605 XP_006713017 15 9605 NP_703148 15 9605>NP_006209 Length = 1068 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 FAIGMLVCE 9 FAIGM VCE Sbjct: 119 FAIGMPVCE 127>XP_006713721 Length = 1068 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 FAIGMLVCE 9 FAIGM VCE Sbjct: 119 FAIGMPVCE 127>NP_775821 Length = 1326 Score = 16.9 bits (32), Expect = 3301 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 IGMLVC 8 IGMLVC Sbjct: 835 IGMLVC 840>XP_005251455 Length = 1334 Score = 16.9 bits (32), Expect = 3301 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 IGMLVC 8 IGMLVC Sbjct: 843 IGMLVC 848>XP_005251456 Length = 1334 Score = 16.9 bits (32), Expect = 3301 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 IGMLVC 8 IGMLVC Sbjct: 843 IGMLVC 848>XP_005251454 Length = 1334 Score = 16.9 bits (32), Expect = 3301 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 IGMLVC 8 IGMLVC Sbjct: 843 IGMLVC 848>NP_001243754 Length = 561 Score = 16.5 bits (31), Expect = 4312 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 FAIGMLVCE 9 F++G+ VC+ Sbjct: 45 FSVGLTVCK 53>NP_001243752 Length = 90 Score = 16.5 bits (31), Expect = 4312 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 FAIGMLVCE 9 F++G+ VC+ Sbjct: 45 FSVGLTVCK 53>NP_001123991 Length = 606 Score = 16.5 bits (31), Expect = 4312 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 FAIGMLVCE 9 F++G+ VC+ Sbjct: 41 FSVGLTVCK 49>NP_001229771 Length = 584 Score = 16.5 bits (31), Expect = 4312 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 FAIGMLVCE 9 F++G+ VC+ Sbjct: 45 FSVGLTVCK 53>NP_001229772 Length = 561 Score = 16.5 bits (31), Expect = 4312 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 FAIGMLVCE 9 F++G+ VC+ Sbjct: 45 FSVGLTVCK 53>NP_001123992 Length = 629 Score = 16.5 bits (31), Expect = 4312 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 FAIGMLVCE 9 F++G+ VC+ Sbjct: 41 FSVGLTVCK 49>NP_009083 Length = 557 Score = 16.5 bits (31), Expect = 4312 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 FAIGMLVCE 9 F++G+ VC+ Sbjct: 41 FSVGLTVCK 49>NP_001229770 Length = 610 Score = 16.5 bits (31), Expect = 4312 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 FAIGMLVCE 9 F++G+ VC+ Sbjct: 45 FSVGLTVCK 53>NP_001243753 Length = 592 Score = 16.5 bits (31), Expect = 4312 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 FAIGMLVCE 9 F++G+ VC+ Sbjct: 45 FSVGLTVCK 53>XP_006718369 Length = 572 Score = 16.5 bits (31), Expect = 4312 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 FAIGMLVCE 9 F++G+ VC+ Sbjct: 56 FSVGLTVCK 64>NP_056344 Length = 613 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 FAIGMLVC 8 F+I +LVC Sbjct: 593 FSINLLVC 600>NP_002010 Length = 1338 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 IGMLVCE 9 IG+L CE Sbjct: 202 IGLLTCE 208>NP_001153392 Length = 687 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 IGMLVCE 9 IG+L CE Sbjct: 202 IGLLTCE 208>NP_001153503 Length = 541 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 IGMLVCE 9 IG+L CE Sbjct: 202 IGLLTCE 208>NP_001153502 Length = 733 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 IGMLVCE 9 IG+L CE Sbjct: 202 IGLLTCE 208>XP_006715519 Length = 603 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 FAIGMLVC 8 F+I +LVC Sbjct: 583 FSINLLVC 590>NP_036342 Length = 653 Score = 15.8 bits (29), Expect = 7355 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 2 AIGMLVC 8 A+G+L+C Sbjct: 94 AVGLLMC 100>NP_001093149 Length = 653 Score = 15.8 bits (29), Expect = 7355 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 2 AIGMLVC 8 A+G+L+C Sbjct: 94 AVGLLMC 100>NP_065433 Length = 1091 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 FAIGMLVC 8 FAI +LVC Sbjct: 90 FAIFILVC 97>NP_689707 Length = 706 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 IGMLVC 8 IG+LVC Sbjct: 558 IGLLVC 563>NP_001153101 Length = 567 Score = 15.8 bits (29), Expect = 7355 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 3 IGMLVCE 9 +G+LVC+ Sbjct: 369 VGLLVCK 375>NP_003636 Length = 620 Score = 15.8 bits (29), Expect = 7355 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 3 IGMLVCE 9 +G+LVC+ Sbjct: 422 VGLLVCK 428>NP_997253 Length = 609 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 AIGMLVC 8 A+G LVC Sbjct: 11 AVGWLVC 17>NP_001137159 Length = 681 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 IGMLVC 8 IG+LVC Sbjct: 533 IGLLVC 538>XP_005251870 Length = 653 Score = 15.8 bits (29), Expect = 7355 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 2 AIGMLVC 8 A+G+L+C Sbjct: 94 AVGLLMC 100>NP_001003750 Length = 310 Score = 15.8 bits (29), Expect = 7355 Identities = 4/9 (44%), Positives = 7/9 (77%) Query: 1 FAIGMLVCE 9 F +G++ CE Sbjct: 103 FFVGLVCCE 111>NP_073753 Length = 836 Score = 15.4 bits (28), Expect = 9605 Identities = 3/7 (42%), Positives = 7/7 (100%) Query: 2 AIGMLVC 8 A+G+++C Sbjct: 683 ALGLIIC 689>NP_064541 Length = 363 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 AIGMLVC 8 AIG L+C Sbjct: 17 AIGFLLC 23>NP_689854 Length = 1835 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 4 GMLVCE 9 G+L+CE Sbjct: 388 GVLICE 393>NP_683692 Length = 3051 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 4 GMLVCE 9 G+L+CE Sbjct: 1895 GVLICE 1900>NP_114110 Length = 464 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 AIGMLVC 8 A+G LVC Sbjct: 170 ALGALVC 176>NP_060700 Length = 1156 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 6/7 (85%) Query: 3 IGMLVCE 9 IG+ +CE Sbjct: 1032 IGLYICE 1038>NP_006832 Length = 504 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 6/7 (85%) Query: 2 AIGMLVC 8 A+G+L C Sbjct: 411 AVGLLTC 417>XP_005261216 Length = 463 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 AIGMLVCE 9 A+G VCE Sbjct: 60 AMGFCVCE 67>XP_006719336 Length = 1779 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 4 GMLVCE 9 G+L+CE Sbjct: 332 GVLICE 337>XP_006719335 Length = 1793 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 4 GMLVCE 9 G+L+CE Sbjct: 388 GVLICE 393>XP_005274406 Length = 430 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 AIGMLVC 8 A+G LVC Sbjct: 136 ALGALVC 142>XP_006715822 Length = 363 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 AIGMLVC 8 AIG L+C Sbjct: 17 AIGFLLC 23>XP_005249870 Length = 363 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 AIGMLVC 8 AIG L+C Sbjct: 17 AIGFLLC 23>XP_005249869 Length = 371 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 AIGMLVC 8 AIG L+C Sbjct: 25 AIGFLLC 31>XP_005248208 Length = 3097 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 4 GMLVCE 9 G+L+CE Sbjct: 1895 GVLICE 1900>XP_005248207 Length = 3098 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 4 GMLVCE 9 G+L+CE Sbjct: 1895 GVLICE 1900>XP_006714021 Length = 3112 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 4 GMLVCE 9 G+L+CE Sbjct: 1895 GVLICE 1900>XP_005265461 Length = 770 Score = 15.4 bits (28), Expect = 9605 Identities = 3/7 (42%), Positives = 7/7 (100%) Query: 2 AIGMLVC 8 A+G+++C Sbjct: 617 ALGLIIC 623>XP_006713017 Length = 504 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 6/7 (85%) Query: 2 AIGMLVC 8 A+G+L C Sbjct: 411 AVGLLTC 417>NP_703148 Length = 1200 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 6/7 (85%) Query: 2 AIGMLVC 8 A+G L+C Sbjct: 472 AVGSLIC 478Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.344 0.154 0.509 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 513,865 Number of extensions: 766 Number of successful extensions: 52 Number of sequences better than 10000.0: 52 Number of HSP's gapped: 52 Number of HSP's successfully gapped: 52 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.6 bits) S2: 28 (15.4 bits)
|
CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |