Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_001135941 18 1135 NP_001154819 18 1482 NP_001154817 18 1482 NP_060693 18 1482 NP_001154818 18 1482 NP_001154816 18 1482 NP_055921 18 1482 XP_006713125 18 1482 XP_006713124 18 1482 XP_005255896 18 1935 XP_005255895 18 1935 NP_001073961 18 1935 NP_000966 17 2528 NP_001186731 17 2528 NP_001159694 17 2528 XP_005274182 17 2528 NP_001549 17 3301 XP_006718896 17 3301 NP_001034302 16 5631 NP_001099007 16 5631 XP_006712793 16 5631 NP_001367 16 7355 NP_001398 16 7355 NP_001230396 16 7355 NP_000701 16 7355 NP_061834 16 7355 NP_689530 16 7355 NP_065810 16 7355 NP_001001895 16 7355 XP_006724076 16 7355 XP_006720684 16 7355 XP_006711547 16 7355 XP_006711545 16 7355 XP_006711544 16 7355 NP_005895 15 9605 NP_001177750 15 9605 NP_001091995 15 9605 NP_001399 15 9605 NP_060674 15 9605 XP_005266401 15 9605 XP_005266400 15 9605 XP_006710468 15 9605 XP_005270637 15 9605 XP_006710375 15 9605 XP_006710374 15 9605 XP_005270464 15 9605 XP_005270463 15 9605 XP_005270462 15 9605 XP_006710373 15 9605 XP_005270461 15 9605 NP_443724 15 9605 NP_001005289 15 9605 NP_001273615 15 9605>NP_001135941 Length = 187 Score = 18.5 bits (36), Expect = 1135 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 EVTRTGCLG 9 ++T TGC+G Sbjct: 4 DLTETGCMG 12>NP_001154819 Length = 572 Score = 18.1 bits (35), Expect = 1482 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 TRTGCLG 9 TRTGC G Sbjct: 433 TRTGCYG 439>NP_001154817 Length = 663 Score = 18.1 bits (35), Expect = 1482 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 TRTGCLG 9 TRTGC G Sbjct: 524 TRTGCYG 530>NP_060693 Length = 623 Score = 18.1 bits (35), Expect = 1482 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 TRTGCLG 9 TRTGC G Sbjct: 484 TRTGCYG 490>NP_001154818 Length = 652 Score = 18.1 bits (35), Expect = 1482 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 TRTGCLG 9 TRTGC G Sbjct: 513 TRTGCYG 519>NP_001154816 Length = 664 Score = 18.1 bits (35), Expect = 1482 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 TRTGCLG 9 TRTGC G Sbjct: 525 TRTGCYG 531>NP_055921 Length = 1467 Score = 18.1 bits (35), Expect = 1482 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 TRTGCLG 9 TR GCLG Sbjct: 816 TRAGCLG 822>XP_006713125 Length = 1467 Score = 18.1 bits (35), Expect = 1482 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 TRTGCLG 9 TR GCLG Sbjct: 816 TRAGCLG 822>XP_006713124 Length = 1467 Score = 18.1 bits (35), Expect = 1482 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 TRTGCLG 9 TR GCLG Sbjct: 816 TRAGCLG 822>XP_005255896 Length = 296 Score = 17.7 bits (34), Expect = 1935 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 EVTRTGCLG 9 E T+T CLG Sbjct: 112 EETKTACLG 120>XP_005255895 Length = 395 Score = 17.7 bits (34), Expect = 1935 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 EVTRTGCLG 9 E T+T CLG Sbjct: 211 EETKTACLG 219>NP_001073961 Length = 395 Score = 17.7 bits (34), Expect = 1935 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 EVTRTGCLG 9 E T+T CLG Sbjct: 211 EETKTACLG 219>NP_000966 Length = 178 Score = 17.3 bits (33), Expect = 2528 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 RTGCLG 9 RTGC+G Sbjct: 147 RTGCIG 152>NP_001186731 Length = 177 Score = 17.3 bits (33), Expect = 2528 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 RTGCLG 9 RTGC+G Sbjct: 146 RTGCIG 151>NP_001159694 Length = 950 Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 EVTRTGCLG 9 +V RTGC G Sbjct: 87 QVPRTGCPG 95>XP_005274182 Length = 966 Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 EVTRTGCLG 9 +V RTGC G Sbjct: 103 QVPRTGCPG 111>NP_001549 Length = 578 Score = 16.9 bits (32), Expect = 3301 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 EVTRTGCL 8 + T+TGCL Sbjct: 456 KATKTGCL 463>XP_006718896 Length = 558 Score = 16.9 bits (32), Expect = 3301 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 EVTRTGCL 8 + T+TGCL Sbjct: 436 KATKTGCL 443>NP_001034302 Length = 425 Score = 16.2 bits (30), Expect = 5631 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 3 TRTGC 7 TRTGC Sbjct: 234 TRTGC 238>NP_001099007 Length = 1687 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 TRTGCLG 9 +RTGC G Sbjct: 855 SRTGCQG 861>XP_006712793 Length = 1887 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 TRTGCLG 9 +RTGC G Sbjct: 1055 SRTGCQG 1061>NP_001367 Length = 4646 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 EVTRTGCLG 9 ++TR CLG Sbjct: 2448 DLTRLRCLG 2456>NP_001398 Length = 3312 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 EVTRTGC 7 EVT +GC Sbjct: 2116 EVTASGC 2122>NP_001230396 Length = 526 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 5/6 (83%) Query: 4 RTGCLG 9 RTGC G Sbjct: 286 RTGCRG 291>NP_000701 Length = 353 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 EVTRTGCLG 9 EV+RT C G Sbjct: 234 EVSRTRCGG 242>NP_061834 Length = 661 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 5/6 (83%) Query: 4 RTGCLG 9 RTGC G Sbjct: 324 RTGCRG 329>NP_689530 Length = 294 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 5/6 (83%) Query: 4 RTGCLG 9 RTGC G Sbjct: 51 RTGCSG 56>NP_065810 Length = 4700 Score = 15.8 bits (29), Expect = 7355 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 4 RTGCL 8 RTGCL Sbjct: 886 RTGCL 890>NP_001001895 Length = 623 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 5/6 (83%) Query: 4 RTGCLG 9 RTGC G Sbjct: 286 RTGCRG 291>XP_006724076 Length = 642 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 5/6 (83%) Query: 4 RTGCLG 9 RTGC G Sbjct: 305 RTGCRG 310>XP_006720684 Length = 4713 Score = 15.8 bits (29), Expect = 7355 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 4 RTGCL 8 RTGCL Sbjct: 899 RTGCL 903>XP_006711547 Length = 572 Score = 15.8 bits (29), Expect = 7355 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 4 RTGCL 8 RTGCL Sbjct: 63 RTGCL 67>XP_006711545 Length = 247 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 5/6 (83%) Query: 2 VTRTGC 7 VTR GC Sbjct: 186 VTRAGC 191>XP_006711544 Length = 251 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 5/6 (83%) Query: 2 VTRTGC 7 VTR GC Sbjct: 186 VTRAGC 191>NP_005895 Length = 426 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 5/6 (83%) Query: 3 TRTGCL 8 TRT CL Sbjct: 121 TRTACL 126>NP_001177750 Length = 425 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 5/6 (83%) Query: 3 TRTGCL 8 TRT CL Sbjct: 121 TRTACL 126>NP_001091995 Length = 683 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 5/6 (83%) Query: 3 TRTGCL 8 TRT CL Sbjct: 584 TRTSCL 589>NP_001399 Length = 2923 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 5/7 (71%) Query: 1 EVTRTGC 7 EVT GC Sbjct: 1963 EVTTNGC 1969>NP_060674 Length = 682 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 5/6 (83%) Query: 3 TRTGCL 8 TRT CL Sbjct: 583 TRTSCL 588>XP_005266401 Length = 635 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 5/6 (83%) Query: 3 TRTGCL 8 TRT CL Sbjct: 536 TRTSCL 541>XP_005266400 Length = 677 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 5/6 (83%) Query: 3 TRTGCL 8 TRT CL Sbjct: 578 TRTSCL 583>XP_006710468 Length = 2916 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 5/7 (71%) Query: 1 EVTRTGC 7 EVT GC Sbjct: 1963 EVTTNGC 1969>XP_005270637 Length = 2921 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 5/7 (71%) Query: 1 EVTRTGC 7 EVT GC Sbjct: 1963 EVTTNGC 1969>XP_006710375 Length = 309 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 EVTRTGCLG 9 E+T T C+G Sbjct: 292 EITDTLCVG 300>XP_006710374 Length = 309 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 EVTRTGCLG 9 E+T T C+G Sbjct: 292 EITDTLCVG 300>XP_005270464 Length = 365 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 EVTRTGCLG 9 E+T T C+G Sbjct: 348 EITDTLCVG 356>XP_005270463 Length = 402 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 EVTRTGCLG 9 E+T T C+G Sbjct: 385 EITDTLCVG 393>XP_005270462 Length = 460 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 EVTRTGCLG 9 E+T T C+G Sbjct: 443 EITDTLCVG 451>XP_006710373 Length = 460 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 EVTRTGCLG 9 E+T T C+G Sbjct: 443 EITDTLCVG 451>XP_005270461 Length = 460 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 EVTRTGCLG 9 E+T T C+G Sbjct: 443 EITDTLCVG 451>NP_443724 Length = 460 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 EVTRTGCLG 9 E+T T C+G Sbjct: 443 EITDTLCVG 451>NP_001005289 Length = 320 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 EVTRTGCL 8 E+T GCL Sbjct: 99 EITFPGCL 106>NP_001273615 Length = 634 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 5/6 (83%) Query: 3 TRTGCL 8 TRT CL Sbjct: 535 TRTSCL 540Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.321 0.141 0.455 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 590,973 Number of extensions: 715 Number of successful extensions: 53 Number of sequences better than 10000.0: 53 Number of HSP's gapped: 53 Number of HSP's successfully gapped: 53 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.8 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |